RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 COL17A1Q9UMD9 1497 aaPredicted RBP6.17□□□□□ -1.42
SPTBN1-206ENST00000602898 LDHCP07864 332 aa6.17□□□□□ -1.42
SPTBN1-206ENST00000602898 CD53P19397 219 aa6.17□□□□□ -1.42
SPTBN1-206ENST00000602898 ATP2B1P20020 1258 aa6.17□□□□□ -1.42
SPTBN1-206ENST00000602898 NEXNQ0ZGT2 675 aa6.17□□□□□ -1.42
SPTBN1-206ENST00000602898 LDLRAD1Q5T700 205 aa6.17□□□□□ -1.42
SPTBN1-206ENST00000602898 ILDR2Q71H61 639 aa6.17□□□□□ -1.42
SPTBN1-206ENST00000602898 MSL3Q8N5Y2 521 aaKnown RBP6.17□□□□□ -1.42
SPTBN1-206ENST00000602898 TSC1Q92574 1164 aa6.17□□□□□ -1.42
SPTBN1-206ENST00000602898 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.17□□□□□ -1.42
SPTBN1-206ENST00000602898 ACBD3Q9H3P7 528 aa6.17□□□□□ -1.42
SPTBN1-206ENST00000602898 SLAIN2Q9P270 581 aa6.17□□□□□ -1.42
SPTBN1-206ENST00000602898 PCDHB15Q9Y5E8 787 aa6.17□□□□□ -1.42
SPTBN1-206ENST00000602898 WDR7Q9Y4E6 1490 aa6.16□□□□□ -1.42
SPTBN1-206ENST00000602898 GOLGA6L3A6NEY3 463 aa6.16□□□□□ -1.42
SPTBN1-206ENST00000602898 RFC5P40937 340 aa6.16□□□□□ -1.42
SPTBN1-206ENST00000602898 HDAC1Q13547 482 aaPredicted RBP6.16□□□□□ -1.42
SPTBN1-206ENST00000602898 CC2D1BQ5T0F9 858 aaKnown RBP6.16□□□□□ -1.42
SPTBN1-206ENST00000602898 TMEM164Q5U3C3 297 aa6.16□□□□□ -1.42
SPTBN1-206ENST00000602898 ANKRD13DQ6ZTN6 518 aa6.16□□□□□ -1.42
SPTBN1-206ENST00000602898 FBXO33Q7Z6M2 555 aa6.16□□□□□ -1.42
SPTBN1-206ENST00000602898 RDH13Q8NBN7 331 aa6.16□□□□□ -1.42
SPTBN1-206ENST00000602898 TTC13Q8NBP0 860 aa6.16□□□□□ -1.42
SPTBN1-206ENST00000602898 NRDCO43847 1150 aa6.16□□□□□ -1.42
SPTBN1-206ENST00000602898 SLC10A3P09131 477 aa6.16□□□□□ -1.42
SPTBN1-206ENST00000602898 TDO2P48775 406 aa6.16□□□□□ -1.42
SPTBN1-206ENST00000602898 AMPD3Q01432 767 aa6.16□□□□□ -1.42
SPTBN1-206ENST00000602898 SWT1Q5T5J6 900 aaKnown RBP6.16□□□□□ -1.42
SPTBN1-206ENST00000602898 C1QTNF12Q5T7M4 302 aa6.16□□□□□ -1.42
SPTBN1-206ENST00000602898 MYSM1Q5VVJ2 828 aa6.16□□□□□ -1.42
SPTBN1-206ENST00000602898 DUSP27Q5VZP5 1158 aa6.16□□□□□ -1.42
SPTBN1-206ENST00000602898 HSCBQ8IWL3 235 aa6.16□□□□□ -1.42
SPTBN1-206ENST00000602898 TMUB1Q9BVT8 246 aa6.16□□□□□ -1.42
SPTBN1-206ENST00000602898 MUC3BQ9H195 1237 aa6.16□□□□□ -1.42
SPTBN1-206ENST00000602898 RSPH9Q9H1X1 276 aaPredicted RBP6.16□□□□□ -1.42
SPTBN1-206ENST00000602898 TFIP11Q9UBB9 837 aaKnown RBP6.16□□□□□ -1.42
SPTBN1-206ENST00000602898 MOXD2PA6NHM9 499 aa6.15□□□□□ -1.42
SPTBN1-206ENST00000602898 TOMM20Q15388 145 aa6.15□□□□□ -1.42
SPTBN1-206ENST00000602898 NFKBIBQ15653 356 aa6.15□□□□□ -1.42
SPTBN1-206ENST00000602898 GEMIN8Q9NWZ8 242 aaKnown RBP6.15□□□□□ -1.42
SPTBN1-206ENST00000602898 CEP162Q5TB80 1403 aa6.15□□□□□ -1.42
SPTBN1-206ENST00000602898 TDRD9Q8NDG6 1382 aaKnown RBP6.15□□□□□ -1.42
SPTBN1-206ENST00000602898 ZRANB2O95218 330 aaKnown RBP eCLIP6.15□□□□□ -1.42
SPTBN1-206ENST00000602898 POU5F1Q01860 360 aaKnown RBP6.15□□□□□ -1.42
SPTBN1-206ENST00000602898 ARMC3Q5W041 872 aa6.15□□□□□ -1.42
SPTBN1-206ENST00000602898 SAMD7Q7Z3H4 446 aa6.15□□□□□ -1.42
SPTBN1-206ENST00000602898 TRIM52Q96A61 297 aa6.15□□□□□ -1.42
SPTBN1-206ENST00000602898 AS3MTQ9HBK9 375 aa6.15□□□□□ -1.42
SPTBN1-206ENST00000602898 ZSWIM6Q9HCJ5 1215 aa6.15□□□□□ -1.42
SPTBN1-206ENST00000602898 INTUQ9ULD6 942 aa6.15□□□□□ -1.42
SPTBN1-206ENST00000602898 FANCAO15360 1455 aa6.15□□□□□ -1.43
SPTBN1-206ENST00000602898 FAM135AQ9P2D6 1515 aa6.15□□□□□ -1.43
SPTBN1-206ENST00000602898 SOWAHDA6NJG2 315 aa6.15□□□□□ -1.43
SPTBN1-206ENST00000602898 TNFRSF10BO14763 440 aa6.15□□□□□ -1.43
SPTBN1-206ENST00000602898 TCERG1O14776 1098 aaKnown RBP6.15□□□□□ -1.43
SPTBN1-206ENST00000602898 RNF19AQ9NV58 838 aa6.15□□□□□ -1.43
SPTBN1-206ENST00000602898 CUEDC1Q9NWM3 386 aaPredicted RBP6.15□□□□□ -1.43
SPTBN1-206ENST00000602898 ZMIZ1Q9ULJ6 1067 aa6.15□□□□□ -1.43
SPTBN1-206ENST00000602898 TNIKQ9UKE5 1360 aa6.14□□□□□ -1.43
SPTBN1-206ENST00000602898 POGZQ7Z3K3 1410 aa6.14□□□□□ -1.43
SPTBN1-206ENST00000602898 YEATS2Q9ULM3 1422 aa6.14□□□□□ -1.43
SPTBN1-206ENST00000602898 IGHDP01880 384 aa6.14□□□□□ -1.43
SPTBN1-206ENST00000602898 TGFB3P10600 412 aa6.14□□□□□ -1.43
SPTBN1-206ENST00000602898 SAFB2Q14151 953 aaKnown RBP eCLIP6.14□□□□□ -1.43
SPTBN1-206ENST00000602898 RNF187Q5TA31 235 aaPredicted RBP6.14□□□□□ -1.43
SPTBN1-206ENST00000602898 QTRT2Q9H974 415 aaKnown RBP6.14□□□□□ -1.43
SPTBN1-206ENST00000602898 ZSCAN20P17040 1043 aaPredicted RBP6.14□□□□□ -1.43
SPTBN1-206ENST00000602898 CABLES1Q8TDN4 633 aa6.14□□□□□ -1.43
SPTBN1-206ENST00000602898 RSPH1Q8WYR4 309 aa6.14□□□□□ -1.43
SPTBN1-206ENST00000602898 MYCBPQ99417 103 aaPredicted RBP6.14□□□□□ -1.43
SPTBN1-206ENST00000602898 PPCSQ9HAB8 311 aa6.14□□□□□ -1.43
SPTBN1-206ENST00000602898 BSDC1Q9NW68 430 aaPredicted RBP6.14□□□□□ -1.43
SPTBN1-206ENST00000602898 UBE4AQ14139 1066 aa6.13□□□□□ -1.43
SPTBN1-206ENST00000602898 NYAP1Q6ZVC0 841 aa6.13□□□□□ -1.43
SPTBN1-206ENST00000602898 CDC5LQ99459 802 aaKnown RBP6.13□□□□□ -1.43
SPTBN1-206ENST00000602898 ZHX3Q9H4I2 956 aa6.13□□□□□ -1.43
SPTBN1-206ENST00000602898 CARMIL2Q6F5E8 1435 aa6.13□□□□□ -1.43
SPTBN1-206ENST00000602898 SYNMO15061 1565 aa6.13□□□□□ -1.43
SPTBN1-206ENST00000602898 VAMP1P23763 118 aa6.13□□□□□ -1.43
SPTBN1-206ENST00000602898 LRRC41Q15345 812 aa6.13□□□□□ -1.43
SPTBN1-206ENST00000602898 ZNF746Q6NUN9 644 aaPredicted RBP6.13□□□□□ -1.43
SPTBN1-206ENST00000602898 USP48Q86UV5 1035 aa6.13□□□□□ -1.43
SPTBN1-206ENST00000602898 TTC30AQ86WT1 665 aa6.13□□□□□ -1.43
SPTBN1-206ENST00000602898 UACAQ9BZF9 1416 aa6.13□□□□□ -1.43
SPTBN1-206ENST00000602898 CPS1P31327 1500 aa6.13□□□□□ -1.43
SPTBN1-206ENST00000602898 OATP04181 439 aa6.12□□□□□ -1.43
SPTBN1-206ENST00000602898 VAC14Q08AM6 782 aa6.12□□□□□ -1.43
SPTBN1-206ENST00000602898 NBPF9Q3BBW0 867 aa6.12□□□□□ -1.43
SPTBN1-206ENST00000602898 PAF1Q8N7H5 531 aa6.12□□□□□ -1.43
SPTBN1-206ENST00000602898 CEP63Q96MT8 703 aa6.12□□□□□ -1.43
SPTBN1-206ENST00000602898 TMEM134Q9H6X4 195 aa6.12□□□□□ -1.43
SPTBN1-206ENST00000602898 DHX57Q6P158 1386 aaKnown RBP6.12□□□□□ -1.43
SPTBN1-206ENST00000602898 ABCA8O94911 1581 aa6.12□□□□□ -1.43
SPTBN1-206ENST00000602898 PRSS47A8MTI9 375 aa6.12□□□□□ -1.43
SPTBN1-206ENST00000602898 ATG7O95352 703 aa6.12□□□□□ -1.43
SPTBN1-206ENST00000602898 KCTD2Q14681 263 aa6.12□□□□□ -1.43
SPTBN1-206ENST00000602898 PODNQ7Z5L7 613 aa6.12□□□□□ -1.43
SPTBN1-206ENST00000602898 METTL16Q86W50 562 aaKnown RBP6.12□□□□□ -1.43
SPTBN1-206ENST00000602898 SUGP1Q8IWZ8 645 aaKnown RBP6.12□□□□□ -1.43
SPTBN1-206ENST00000602898 SPIRE2Q8WWL2 714 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms