RNA–Protein interactions for RNA: ENST00000601656.5

FARP1-235, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-235ENST00000601656 ITSN1Q15811 1721 aa13□□□□□ -0.33
FARP1-235ENST00000601656 PALM3A6NDB9 673 aaPredicted RBP13□□□□□ -0.33
FARP1-235ENST00000601656 GRIN3BO60391 1043 aa13□□□□□ -0.33
FARP1-235ENST00000601656 LILRB3O75022 631 aa13□□□□□ -0.33
FARP1-235ENST00000601656 GCP02774 474 aa13□□□□□ -0.33
FARP1-235ENST00000601656 TOM1L2Q6ZVM7 507 aa13□□□□□ -0.33
FARP1-235ENST00000601656 POLD1P28340 1107 aa12.99□□□□□ -0.33
FARP1-235ENST00000601656 B4GALNT3Q6L9W6 998 aa12.99□□□□□ -0.33
FARP1-235ENST00000601656 KAT6BQ8WYB5 2073 aa12.98□□□□□ -0.33
FARP1-235ENST00000601656 BCL9O00512 1426 aa12.98□□□□□ -0.33
FARP1-235ENST00000601656 ATP10DQ9P241 1426 aa12.98□□□□□ -0.33
FARP1-235ENST00000601656 ACEP12821 1306 aa12.98□□□□□ -0.33
FARP1-235ENST00000601656 NLRP13Q86W25 1043 aa12.98□□□□□ -0.33
FARP1-235ENST00000601656 NLGN2Q8NFZ4 835 aa12.98□□□□□ -0.33
FARP1-235ENST00000601656 YBX3P16989 372 aaKnown RBP eCLIP12.97□□□□□ -0.33
FARP1-235ENST00000601656 LMOD1P29536 600 aaPredicted RBP12.97□□□□□ -0.33
FARP1-235ENST00000601656 QPCTQ16769 361 aa12.97□□□□□ -0.33
FARP1-235ENST00000601656 CDCA7Q9BWT1 371 aaPredicted RBP12.97□□□□□ -0.33
FARP1-235ENST00000601656 PCDHGA4Q9Y5G9 962 aa12.97□□□□□ -0.33
FARP1-235ENST00000601656 AATKQ6ZMQ8 1374 aa12.96□□□□□ -0.33
FARP1-235ENST00000601656 USP19O94966 1318 aa12.96□□□□□ -0.33
FARP1-235ENST00000601656 EXOC5O00471 708 aa12.96□□□□□ -0.33
FARP1-235ENST00000601656 TYW1BQ6NUM6 668 aa12.96□□□□□ -0.33
FARP1-235ENST00000601656 PADI6Q6TGC4 694 aa12.96□□□□□ -0.33
FARP1-235ENST00000601656 SLC16A10Q8TF71 515 aa12.96□□□□□ -0.33
FARP1-235ENST00000601656 KHSRPQ92945 711 aaKnown RBP eCLIP12.96□□□□□ -0.33
FARP1-235ENST00000601656 ALG2Q9H553 416 aa12.96□□□□□ -0.33
FARP1-235ENST00000601656 ZNF827Q17R98 1081 aa12.95□□□□□ -0.34
FARP1-235ENST00000601656 CSPP1Q1MSJ5 1256 aa12.95□□□□□ -0.34
FARP1-235ENST00000601656 ZNF526Q8TF50 670 aaPredicted RBP12.95□□□□□ -0.34
FARP1-235ENST00000601656 RBM27Q9P2N5 1060 aaKnown RBP12.95□□□□□ -0.34
FARP1-235ENST00000601656 PCDHGA10Q9Y5H3 936 aa12.95□□□□□ -0.34
FARP1-235ENST00000601656 POLR3AO14802 1390 aaPredicted RBP12.94□□□□□ -0.34
FARP1-235ENST00000601656 ERCC3P19447 782 aa12.94□□□□□ -0.34
FARP1-235ENST00000601656 RTL5Q5HYW3 569 aaPredicted RBP12.94□□□□□ -0.34
FARP1-235ENST00000601656 TTC13Q8NBP0 860 aa12.94□□□□□ -0.34
FARP1-235ENST00000601656 ACSBG1Q96GR2 724 aa12.94□□□□□ -0.34
FARP1-235ENST00000601656 MPHOSPH9Q99550 1183 aa12.94□□□□□ -0.34
FARP1-235ENST00000601656 CDK19Q9BWU1 502 aa12.94□□□□□ -0.34
FARP1-235ENST00000601656 WNK3Q9BYP7 1800 aa12.93□□□□□ -0.34
FARP1-235ENST00000601656 NUDT7P0C024 238 aa12.93□□□□□ -0.34
FARP1-235ENST00000601656 CD46P15529 392 aa12.93□□□□□ -0.34
FARP1-235ENST00000601656 TOPAZ1Q8N9V7 1692 aa12.93□□□□□ -0.34
FARP1-235ENST00000601656 ADGRB1O14514 1584 aa12.92□□□□□ -0.34
FARP1-235ENST00000601656 NUTM1Q86Y26 1132 aa12.92□□□□□ -0.34
FARP1-235ENST00000601656 TFIP11Q9UBB9 837 aaKnown RBP12.92□□□□□ -0.34
FARP1-235ENST00000601656 WDR17Q8IZU2 1322 aa12.91□□□□□ -0.34
FARP1-235ENST00000601656 MOXD2PA6NHM9 499 aa12.91□□□□□ -0.34
FARP1-235ENST00000601656 APLP1P51693 650 aa12.91□□□□□ -0.34
FARP1-235ENST00000601656 COL13A1Q5TAT6 717 aaPredicted RBP12.91□□□□□ -0.34
FARP1-235ENST00000601656 DNAJC5GQ8N7S2 189 aa12.91□□□□□ -0.34
FARP1-235ENST00000601656 RBM46Q8TBY0 533 aaKnown RBP12.91□□□□□ -0.34
FARP1-235ENST00000601656 LRRC4BQ9NT99 713 aa12.91□□□□□ -0.34
FARP1-235ENST00000601656 AXIN2Q9Y2T1 843 aa12.91□□□□□ -0.34
FARP1-235ENST00000601656 PAPPAQ13219 1627 aa12.91□□□□□ -0.34
FARP1-235ENST00000601656 COL24A1Q17RW2 1714 aa12.91□□□□□ -0.34
FARP1-235ENST00000601656 PBX2P40425 430 aa12.9□□□□□ -0.34
FARP1-235ENST00000601656 PRPF38BQ5VTL8 546 aaKnown RBP12.9□□□□□ -0.34
FARP1-235ENST00000601656 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.89□□□□□ -0.35
FARP1-235ENST00000601656 GPR37L1O60883 481 aa12.89□□□□□ -0.35
FARP1-235ENST00000601656 VAC14Q08AM6 782 aa12.89□□□□□ -0.35
FARP1-235ENST00000601656 CCER1Q8TC90 406 aaPredicted RBP12.89□□□□□ -0.35
FARP1-235ENST00000601656 CARD10Q9BWT7 1032 aa12.89□□□□□ -0.35
FARP1-235ENST00000601656 NHSQ6T4R5 1651 aa12.89□□□□□ -0.35
FARP1-235ENST00000601656 COL18A1P39060 1754 aa12.89□□□□□ -0.35
FARP1-235ENST00000601656 RGPD5Q99666 1765 aa12.89□□□□□ -0.35
FARP1-235ENST00000601656 PNPLA7Q6ZV29 1317 aa12.88□□□□□ -0.35
FARP1-235ENST00000601656 SOX11P35716 441 aa12.88□□□□□ -0.35
FARP1-235ENST00000601656 UCN2Q96RP3 112 aa12.88□□□□□ -0.35
FARP1-235ENST00000601656 TFCP2L1Q9NZI6 479 aa12.88□□□□□ -0.35
FARP1-235ENST00000601656 PCDHB15Q9Y5E8 787 aa12.88□□□□□ -0.35
FARP1-235ENST00000601656 BTAF1O14981 1849 aa12.88□□□□□ -0.35
FARP1-235ENST00000601656 QSER1Q2KHR3 1735 aa12.88□□□□□ -0.35
FARP1-235ENST00000601656 SULF1Q8IWU6 871 aa12.87□□□□□ -0.35
FARP1-235ENST00000601656 FAM177A1Q8N128 213 aaPredicted RBP12.87□□□□□ -0.35
FARP1-235ENST00000601656 MRRFQ96E11 262 aaKnown RBP12.87□□□□□ -0.35
FARP1-235ENST00000601656 KIAA1522Q9P206 1035 aaPredicted RBP12.87□□□□□ -0.35
FARP1-235ENST00000601656 LHX6Q9UPM6 363 aa12.87□□□□□ -0.35
FARP1-235ENST00000601656 USP6P35125 1406 aa12.87□□□□□ -0.35
FARP1-235ENST00000601656 ADCY9O60503 1353 aa12.86□□□□□ -0.35
FARP1-235ENST00000601656 BRD4O60885 1362 aaPredicted RBP12.86□□□□□ -0.35
FARP1-235ENST00000601656 PRELPP51888 382 aa12.86□□□□□ -0.35
FARP1-235ENST00000601656 NDUFV2P19404 249 aa12.85□□□□□ -0.35
FARP1-235ENST00000601656 CDCA8Q53HL2 280 aa12.85□□□□□ -0.35
FARP1-235ENST00000601656 TNS4Q8IZW8 715 aa12.85□□□□□ -0.35
FARP1-235ENST00000601656 RNF166Q96A37 237 aaPredicted RBP12.85□□□□□ -0.35
FARP1-235ENST00000601656 MAFBQ9Y5Q3 323 aaPredicted RBP12.85□□□□□ -0.35
FARP1-235ENST00000601656 ARHGEF28Q8N1W1 1705 aaKnown RBP12.85□□□□□ -0.35
FARP1-235ENST00000601656 TUBGCP6Q96RT7 1819 aa12.84□□□□□ -0.35
FARP1-235ENST00000601656 SLC27A3Q5K4L6 730 aa12.84□□□□□ -0.35
FARP1-235ENST00000601656 ANKRD13DQ6ZTN6 518 aa12.84□□□□□ -0.35
FARP1-235ENST00000601656 TRIM34Q9BYJ4 488 aa12.84□□□□□ -0.35
FARP1-235ENST00000601656 LSM11P83369 360 aaKnown RBP eCLIP12.83□□□□□ -0.36
FARP1-235ENST00000601656 ELOAQ14241 798 aaKnown RBP12.83□□□□□ -0.36
FARP1-235ENST00000601656 DNAJC14Q6Y2X3 702 aaPredicted RBP12.83□□□□□ -0.36
FARP1-235ENST00000601656 ARHGEF25Q86VW2 580 aa12.83□□□□□ -0.36
FARP1-235ENST00000601656 CCDC7Q96M83 1385 aa12.82□□□□□ -0.36
FARP1-235ENST00000601656 TNS2Q63HR2 1409 aa12.82□□□□□ -0.36
FARP1-235ENST00000601656 KCNQ4P56696 695 aa12.82□□□□□ -0.36
FARP1-235ENST00000601656 DCAF11Q8TEB1 546 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms