RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 TGFB2P61812 414 aa20.52■□□□□ 0.87
RPS28-203ENST00000600659 CLEC4GQ6UXB4 293 aa20.52■□□□□ 0.87
RPS28-203ENST00000600659 BICDL1Q6ZP65 573 aa20.52■□□□□ 0.87
RPS28-203ENST00000600659 IL16Q14005 1332 aa20.51■□□□□ 0.87
RPS28-203ENST00000600659 MAP3K15Q6ZN16 1313 aa20.51■□□□□ 0.87
RPS28-203ENST00000600659 CCER2I3L3R5 266 aa20.51■□□□□ 0.87
RPS28-203ENST00000600659 DUSP27Q5VZP5 1158 aa20.51■□□□□ 0.87
RPS28-203ENST00000600659 NECTIN2Q92692 538 aa20.51■□□□□ 0.87
RPS28-203ENST00000600659 ATP10DQ9P241 1426 aa20.5■□□□□ 0.87
RPS28-203ENST00000600659 DPEP1P16444 411 aa20.5■□□□□ 0.87
RPS28-203ENST00000600659 NPM2Q86SE8 214 aaKnown RBP20.5■□□□□ 0.87
RPS28-203ENST00000600659 NGEFQ8N5V2 710 aa20.5■□□□□ 0.87
RPS28-203ENST00000600659 TSR2Q969E8 191 aaKnown RBP20.5■□□□□ 0.87
RPS28-203ENST00000600659 A0A0G2JLW4 131 aa20.49■□□□□ 0.87
RPS28-203ENST00000600659 ERVV-1B6SEH8 477 aa20.49■□□□□ 0.87
RPS28-203ENST00000600659 PRR5LQ6MZQ0 368 aa20.49■□□□□ 0.87
RPS28-203ENST00000600659 C8orf58Q8NAV2 365 aa20.49■□□□□ 0.87
RPS28-203ENST00000600659 DDX21Q9NR30 783 aaKnown RBP eCLIP20.49■□□□□ 0.87
RPS28-203ENST00000600659 CHPF2Q9P2E5 772 aa20.49■□□□□ 0.87
RPS28-203ENST00000600659 ZNF521Q96K83 1311 aa20.48■□□□□ 0.87
RPS28-203ENST00000600659 TNRC6CQ9HCJ0 1690 aaKnown RBP20.48■□□□□ 0.87
RPS28-203ENST00000600659 GPR162Q16538 588 aa20.48■□□□□ 0.87
RPS28-203ENST00000600659 HDGFL1Q5TGJ6 251 aa20.48■□□□□ 0.87
RPS28-203ENST00000600659 TSPYL6Q8N831 410 aa20.48■□□□□ 0.87
RPS28-203ENST00000600659 SPINK5Q9NQ38 1064 aaPredicted RBP20.48■□□□□ 0.87
RPS28-203ENST00000600659 WWC3Q9ULE0 1092 aa20.48■□□□□ 0.87
RPS28-203ENST00000600659 SALL2Q9Y467 1007 aaPredicted RBP20.48■□□□□ 0.87
RPS28-203ENST00000600659 ARFGEF2Q9Y6D5 1785 aa20.47■□□□□ 0.87
RPS28-203ENST00000600659 SETDB2Q96T68 719 aa20.47■□□□□ 0.87
RPS28-203ENST00000600659 ZBTB3Q9H5J0 574 aa20.47■□□□□ 0.87
RPS28-203ENST00000600659 ZNF652Q9Y2D9 606 aa20.47■□□□□ 0.87
RPS28-203ENST00000600659 CHRNA5P30532 468 aa20.46■□□□□ 0.87
RPS28-203ENST00000600659 WDR63Q8IWG1 891 aa20.46■□□□□ 0.87
RPS28-203ENST00000600659 PELP1Q8IZL8 1130 aaKnown RBP20.46■□□□□ 0.87
RPS28-203ENST00000600659 UBN2Q6ZU65 1347 aa20.45■□□□□ 0.86
RPS28-203ENST00000600659 FANCIQ9NVI1 1328 aa20.45■□□□□ 0.86
RPS28-203ENST00000600659 DCAF8L1A6NGE4 600 aa20.45■□□□□ 0.86
RPS28-203ENST00000600659 ELL2O00472 640 aaPredicted RBP20.45■□□□□ 0.86
RPS28-203ENST00000600659 DIEXFQ68CQ4 756 aaKnown RBP20.45■□□□□ 0.86
RPS28-203ENST00000600659 CCDC24Q8N4L8 307 aa20.45■□□□□ 0.86
RPS28-203ENST00000600659 NIP7Q9Y221 180 aaKnown RBP eCLIP20.45■□□□□ 0.86
RPS28-203ENST00000600659 CACNA1SQ13698 1873 aa20.44■□□□□ 0.86
RPS28-203ENST00000600659 GIGYF2Q6Y7W6 1299 aaKnown RBP20.44■□□□□ 0.86
RPS28-203ENST00000600659 KIF6Q6ZMV9 814 aa20.44■□□□□ 0.86
RPS28-203ENST00000600659 XAGE3Q8WTP9 111 aa20.44■□□□□ 0.86
RPS28-203ENST00000600659 COPS6Q7L5N1 327 aa20.43■□□□□ 0.86
RPS28-203ENST00000600659 ZNF34Q8IZ26 560 aa20.43■□□□□ 0.86
RPS28-203ENST00000600659 CNBD1Q8NA66 436 aa20.43■□□□□ 0.86
RPS28-203ENST00000600659 MIER1Q8N108 512 aa20.42■□□□□ 0.86
RPS28-203ENST00000600659 DBF4Q9UBU7 674 aaPredicted RBP20.42■□□□□ 0.86
RPS28-203ENST00000600659 CACNA1FO60840 1977 aa20.42■□□□□ 0.86
RPS28-203ENST00000600659 ABCC12Q96J65 1359 aa20.42■□□□□ 0.86
RPS28-203ENST00000600659 IBTKQ9P2D0 1353 aaPredicted RBP20.42■□□□□ 0.86
RPS28-203ENST00000600659 BRIP1Q9BX63 1249 aa20.41■□□□□ 0.86
RPS28-203ENST00000600659 GRIN3BO60391 1043 aa20.4■□□□□ 0.86
RPS28-203ENST00000600659 LAMB2P55268 1798 aa20.4■□□□□ 0.86
RPS28-203ENST00000600659 GPTP24298 496 aa20.39■□□□□ 0.85
RPS28-203ENST00000600659 AIMP1Q12904 312 aaKnown RBP20.39■□□□□ 0.85
RPS28-203ENST00000600659 NBPF5PQ86XG9 351 aaPredicted RBP20.39■□□□□ 0.85
RPS28-203ENST00000600659 SLX4Q8IY92 1834 aa20.39■□□□□ 0.85
RPS28-203ENST00000600659 RIC1Q4ADV7 1423 aa20.39■□□□□ 0.85
RPS28-203ENST00000600659 SUSD4Q5VX71 490 aa20.38■□□□□ 0.85
RPS28-203ENST00000600659 PHAXQ9H814 394 aaKnown RBP20.38■□□□□ 0.85
RPS28-203ENST00000600659 HYPKQ9NX55 129 aa20.38■□□□□ 0.85
RPS28-203ENST00000600659 PIM2Q9P1W9 311 aa20.38■□□□□ 0.85
RPS28-203ENST00000600659 BCS1LQ9Y276 419 aa20.38■□□□□ 0.85
RPS28-203ENST00000600659 SBF1O95248 1867 aa20.38■□□□□ 0.85
RPS28-203ENST00000600659 KLRG2A4D1S0 409 aaPredicted RBP20.37■□□□□ 0.85
RPS28-203ENST00000600659 NTSR2O95665 410 aa20.37■□□□□ 0.85
RPS28-203ENST00000600659 TWISTNBQ3B726 338 aaPredicted RBP20.37■□□□□ 0.85
RPS28-203ENST00000600659 C2CD5Q86YS7 1000 aa20.37■□□□□ 0.85
RPS28-203ENST00000600659 DDX60Q8IY21 1712 aaKnown RBP20.36■□□□□ 0.85
RPS28-203ENST00000600659 FAM177BA6PVY3 158 aa20.36■□□□□ 0.85
RPS28-203ENST00000600659 YY1P25490 414 aa20.36■□□□□ 0.85
RPS28-203ENST00000600659 ST5P78524 1137 aa20.36■□□□□ 0.85
RPS28-203ENST00000600659 EXOSC9Q06265 439 aaKnown RBP20.35■□□□□ 0.85
RPS28-203ENST00000600659 TPTE2Q6XPS3 522 aa20.35■□□□□ 0.85
RPS28-203ENST00000600659 NUTM1Q86Y26 1132 aa20.35■□□□□ 0.85
RPS28-203ENST00000600659 PLBD2Q8NHP8 589 aa20.35■□□□□ 0.85
RPS28-203ENST00000600659 FER1L6Q2WGJ9 1857 aa20.35■□□□□ 0.85
RPS28-203ENST00000600659 VAMP4O75379 141 aa20.34■□□□□ 0.85
RPS28-203ENST00000600659 SRGNP10124 158 aa20.34■□□□□ 0.85
RPS28-203ENST00000600659 PDE6BP35913 854 aa20.34■□□□□ 0.85
RPS28-203ENST00000600659 TCIRG1Q13488 830 aa20.34■□□□□ 0.85
RPS28-203ENST00000600659 DALRD3Q5D0E6 543 aaKnown RBP20.34■□□□□ 0.85
RPS28-203ENST00000600659 CCDC30Q5VVM6 783 aa20.34■□□□□ 0.85
RPS28-203ENST00000600659 ADCY9O60503 1353 aa20.34■□□□□ 0.85
RPS28-203ENST00000600659 H0YIN7 160 aa20.33■□□□□ 0.85
RPS28-203ENST00000600659 ERFEQ4G0M1 354 aa20.33■□□□□ 0.85
RPS28-203ENST00000600659 PARP10Q53GL7 1025 aa20.33■□□□□ 0.85
RPS28-203ENST00000600659 ANKRD13DQ6ZTN6 518 aa20.33■□□□□ 0.85
RPS28-203ENST00000600659 NLRP10Q86W26 655 aa20.33■□□□□ 0.85
RPS28-203ENST00000600659 PDZRN3Q9UPQ7 1066 aa20.33■□□□□ 0.85
RPS28-203ENST00000600659 TCERG1O14776 1098 aaKnown RBP20.32■□□□□ 0.84
RPS28-203ENST00000600659 ISCA1Q9BUE6 129 aa20.32■□□□□ 0.84
RPS28-203ENST00000600659 NYXQ9GZU5 481 aa20.32■□□□□ 0.84
RPS28-203ENST00000600659 CCDC88AQ3V6T2 1871 aa20.32■□□□□ 0.84
RPS28-203ENST00000600659 GOLGA2Q08379 1002 aa20.31■□□□□ 0.84
RPS28-203ENST00000600659 CRY2Q49AN0 593 aa20.31■□□□□ 0.84
RPS28-203ENST00000600659 HSP90AB3PQ58FF7 597 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms