RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 PRR5LQ6MZQ0 368 aa17.53■□□□□ 0.4
ARHGEF1-222ENST00000600517 WWC1Q8IX03 1113 aa17.53■□□□□ 0.4
ARHGEF1-222ENST00000600517 MAP3K15Q6ZN16 1313 aa17.52■□□□□ 0.4
ARHGEF1-222ENST00000600517 KIF6Q6ZMV9 814 aa17.52■□□□□ 0.4
ARHGEF1-222ENST00000600517 BRIP1Q9BX63 1249 aa17.52■□□□□ 0.4
ARHGEF1-222ENST00000600517 BCS1LQ9Y276 419 aa17.52■□□□□ 0.4
ARHGEF1-222ENST00000600517 KIAA1551Q9HCM1 1747 aa17.52■□□□□ 0.39
ARHGEF1-222ENST00000600517 NRXN2Q9P2S2 1712 aa17.52■□□□□ 0.39
ARHGEF1-222ENST00000600517 PROSER3Q2NL68 480 aa17.51■□□□□ 0.39
ARHGEF1-222ENST00000600517 DUSP27Q5VZP5 1158 aa17.51■□□□□ 0.39
ARHGEF1-222ENST00000600517 FAM9BQ8IZU0 186 aa17.51■□□□□ 0.39
ARHGEF1-222ENST00000600517 DDX21Q9NR30 783 aaKnown RBP eCLIP17.51■□□□□ 0.39
ARHGEF1-222ENST00000600517 NIP7Q9Y221 180 aaKnown RBP eCLIP17.51■□□□□ 0.39
ARHGEF1-222ENST00000600517 SENP3-EIF4A1A0A087X0R7 540 aa17.5■□□□□ 0.39
ARHGEF1-222ENST00000600517 DALRD3Q5D0E6 543 aaKnown RBP17.5■□□□□ 0.39
ARHGEF1-222ENST00000600517 CNBD1Q8NA66 436 aa17.5■□□□□ 0.39
ARHGEF1-222ENST00000600517 NECTIN2Q92692 538 aa17.5■□□□□ 0.39
ARHGEF1-222ENST00000600517 H0YIN7 160 aa17.49■□□□□ 0.39
ARHGEF1-222ENST00000600517 ANXA1P04083 346 aa17.49■□□□□ 0.39
ARHGEF1-222ENST00000600517 PDE6BP35913 854 aa17.49■□□□□ 0.39
ARHGEF1-222ENST00000600517 HDGFL1Q5TGJ6 251 aa17.49■□□□□ 0.39
ARHGEF1-222ENST00000600517 TPTE2Q6XPS3 522 aa17.49■□□□□ 0.39
ARHGEF1-222ENST00000600517 NBPF5PQ86XG9 351 aaPredicted RBP17.49■□□□□ 0.39
ARHGEF1-222ENST00000600517 C2CD5Q86YS7 1000 aa17.49■□□□□ 0.39
ARHGEF1-222ENST00000600517 CCDC24Q8N4L8 307 aa17.49■□□□□ 0.39
ARHGEF1-222ENST00000600517 ZBTB3Q9H5J0 574 aa17.49■□□□□ 0.39
ARHGEF1-222ENST00000600517 PDZRN3Q9UPQ7 1066 aa17.49■□□□□ 0.39
ARHGEF1-222ENST00000600517 IL16Q14005 1332 aa17.48■□□□□ 0.39
ARHGEF1-222ENST00000600517 GIGYF2Q6Y7W6 1299 aaKnown RBP17.48■□□□□ 0.39
ARHGEF1-222ENST00000600517 COPS6Q7L5N1 327 aa17.48■□□□□ 0.39
ARHGEF1-222ENST00000600517 AFDNP55196 1824 aaKnown RBP17.48■□□□□ 0.39
ARHGEF1-222ENST00000600517 BCORQ6W2J9 1755 aa17.48■□□□□ 0.39
ARHGEF1-222ENST00000600517 N4BP2Q86UW6 1770 aaPredicted RBP17.48■□□□□ 0.39
ARHGEF1-222ENST00000600517 ST5P78524 1137 aa17.47■□□□□ 0.39
ARHGEF1-222ENST00000600517 ZNF34Q8IZ26 560 aa17.47■□□□□ 0.39
ARHGEF1-222ENST00000600517 C8orf58Q8NAV2 365 aa17.47■□□□□ 0.39
ARHGEF1-222ENST00000600517 CHPF2Q9P2E5 772 aa17.47■□□□□ 0.39
ARHGEF1-222ENST00000600517 DBF4Q9UBU7 674 aaPredicted RBP17.47■□□□□ 0.39
ARHGEF1-222ENST00000600517 ELL2O00472 640 aaPredicted RBP17.46■□□□□ 0.39
ARHGEF1-222ENST00000600517 NPHP1O15259 732 aa17.46■□□□□ 0.39
ARHGEF1-222ENST00000600517 WDR63Q8IWG1 891 aa17.46■□□□□ 0.39
ARHGEF1-222ENST00000600517 XAGE3Q8WTP9 111 aa17.46■□□□□ 0.39
ARHGEF1-222ENST00000600517 ATP10DQ9P241 1426 aa17.46■□□□□ 0.39
ARHGEF1-222ENST00000600517 AIMP1Q12904 312 aaKnown RBP17.45■□□□□ 0.38
ARHGEF1-222ENST00000600517 ARHGAP27Q6ZUM4 889 aa17.45■□□□□ 0.38
ARHGEF1-222ENST00000600517 TTLL6Q8N841 843 aa17.45■□□□□ 0.38
ARHGEF1-222ENST00000600517 HYPKQ9NX55 129 aa17.45■□□□□ 0.38
ARHGEF1-222ENST00000600517 SALL2Q9Y467 1007 aaPredicted RBP17.45■□□□□ 0.38
ARHGEF1-222ENST00000600517 KLRG2A4D1S0 409 aaPredicted RBP17.44■□□□□ 0.38
ARHGEF1-222ENST00000600517 FAM177BA6PVY3 158 aa17.44■□□□□ 0.38
ARHGEF1-222ENST00000600517 GPTP24298 496 aa17.44■□□□□ 0.38
ARHGEF1-222ENST00000600517 ZNF784Q8NCA9 323 aaPredicted RBP17.44■□□□□ 0.38
ARHGEF1-222ENST00000600517 CHMP4AQ9BY43 222 aa17.44■□□□□ 0.38
ARHGEF1-222ENST00000600517 NYXQ9GZU5 481 aa17.44■□□□□ 0.38
ARHGEF1-222ENST00000600517 SRGNP10124 158 aa17.43■□□□□ 0.38
ARHGEF1-222ENST00000600517 PARP10Q53GL7 1025 aa17.43■□□□□ 0.38
ARHGEF1-222ENST00000600517 SUSD4Q5VX71 490 aa17.43■□□□□ 0.38
ARHGEF1-222ENST00000600517 TSR2Q969E8 191 aaKnown RBP17.43■□□□□ 0.38
ARHGEF1-222ENST00000600517 UBN2Q6ZU65 1347 aa17.43■□□□□ 0.38
ARHGEF1-222ENST00000600517 CHD4Q14839 1912 aa17.43■□□□□ 0.38
ARHGEF1-222ENST00000600517 CCER2I3L3R5 266 aa17.42■□□□□ 0.38
ARHGEF1-222ENST00000600517 GTF2E1P29083 439 aaPredicted RBP17.42■□□□□ 0.38
ARHGEF1-222ENST00000600517 STYK1Q6J9G0 422 aa17.42■□□□□ 0.38
ARHGEF1-222ENST00000600517 ANKRD13DQ6ZTN6 518 aa17.42■□□□□ 0.38
ARHGEF1-222ENST00000600517 TSPYL6Q8N831 410 aa17.42■□□□□ 0.38
ARHGEF1-222ENST00000600517 ZNF622Q969S3 477 aaKnown RBP eCLIP17.42■□□□□ 0.38
ARHGEF1-222ENST00000600517 BRCA1P38398 1863 aaKnown RBP17.41■□□□□ 0.38
ARHGEF1-222ENST00000600517 TCIRG1Q13488 830 aa17.41■□□□□ 0.38
ARHGEF1-222ENST00000600517 HSP90AB3PQ58FF7 597 aa17.41■□□□□ 0.38
ARHGEF1-222ENST00000600517 PLBD2Q8NHP8 589 aa17.41■□□□□ 0.38
ARHGEF1-222ENST00000600517 IBTKQ9P2D0 1353 aaPredicted RBP17.4■□□□□ 0.38
ARHGEF1-222ENST00000600517 ERFEQ4G0M1 354 aa17.4■□□□□ 0.38
ARHGEF1-222ENST00000600517 CCDC30Q5VVM6 783 aa17.4■□□□□ 0.38
ARHGEF1-222ENST00000600517 PPP1R42Q7Z4L9 355 aa17.4■□□□□ 0.38
ARHGEF1-222ENST00000600517 NUTM1Q86Y26 1132 aa17.4■□□□□ 0.38
ARHGEF1-222ENST00000600517 CNKSR1Q969H4 720 aa17.4■□□□□ 0.38
ARHGEF1-222ENST00000600517 MASTLQ96GX5 879 aa17.4■□□□□ 0.38
ARHGEF1-222ENST00000600517 ANKRD31Q8N7Z5 1873 aa17.39■□□□□ 0.38
ARHGEF1-222ENST00000600517 NTSR2O95665 410 aa17.39■□□□□ 0.37
ARHGEF1-222ENST00000600517 NUP98P52948 1817 aa17.38■□□□□ 0.37
ARHGEF1-222ENST00000600517 NPR1P16066 1061 aa17.38■□□□□ 0.37
ARHGEF1-222ENST00000600517 TWISTNBQ3B726 338 aaPredicted RBP17.38■□□□□ 0.37
ARHGEF1-222ENST00000600517 SLC10A5Q5PT55 438 aa17.38■□□□□ 0.37
ARHGEF1-222ENST00000600517 NLRP10Q86W26 655 aa17.38■□□□□ 0.37
ARHGEF1-222ENST00000600517 PHAXQ9H814 394 aaKnown RBP17.38■□□□□ 0.37
ARHGEF1-222ENST00000600517 SPINK5Q9NQ38 1064 aaPredicted RBP17.38■□□□□ 0.37
ARHGEF1-222ENST00000600517 FANCIQ9NVI1 1328 aa17.38■□□□□ 0.37
ARHGEF1-222ENST00000600517 GOLGA2Q08379 1002 aa17.37■□□□□ 0.37
ARHGEF1-222ENST00000600517 CRY2Q49AN0 593 aa17.37■□□□□ 0.37
ARHGEF1-222ENST00000600517 UTP14AQ9BVJ6 771 aaKnown RBP17.37■□□□□ 0.37
ARHGEF1-222ENST00000600517 RNF123Q5XPI4 1314 aa17.37■□□□□ 0.37
ARHGEF1-222ENST00000600517 ADCY9O60503 1353 aa17.37■□□□□ 0.37
ARHGEF1-222ENST00000600517 DLEC1Q9Y238 1755 aa17.36■□□□□ 0.37
ARHGEF1-222ENST00000600517 ARFGEF1Q9Y6D6 1849 aa17.36■□□□□ 0.37
ARHGEF1-222ENST00000600517 C21orf2O43822 256 aa17.36■□□□□ 0.37
ARHGEF1-222ENST00000600517 ISCA1Q9BUE6 129 aa17.36■□□□□ 0.37
ARHGEF1-222ENST00000600517 ZNF521Q96K83 1311 aa17.36■□□□□ 0.37
ARHGEF1-222ENST00000600517 ABCC12Q96J65 1359 aa17.36■□□□□ 0.37
ARHGEF1-222ENST00000600517 ALDH1B1P30837 517 aa17.35■□□□□ 0.37
ARHGEF1-222ENST00000600517 TRIM28Q13263 835 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms