RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 ARHGAP27Q6ZUM4 889 aa16.71■□□□□ 0.27
SH2D3A-208ENST00000599563 NBPF15Q8N660 670 aa16.71■□□□□ 0.27
SH2D3A-208ENST00000599563 BRIP1Q9BX63 1249 aa16.71■□□□□ 0.27
SH2D3A-208ENST00000599563 SALL2Q9Y467 1007 aaPredicted RBP16.71■□□□□ 0.27
SH2D3A-208ENST00000599563 CHRNA5P30532 468 aa16.7■□□□□ 0.26
SH2D3A-208ENST00000599563 ST5P78524 1137 aa16.7■□□□□ 0.26
SH2D3A-208ENST00000599563 CNBD1Q8NA66 436 aa16.7■□□□□ 0.26
SH2D3A-208ENST00000599563 NUP98P52948 1817 aa16.7■□□□□ 0.26
SH2D3A-208ENST00000599563 PRR5LQ6MZQ0 368 aa16.69■□□□□ 0.26
SH2D3A-208ENST00000599563 C2CD5Q86YS7 1000 aa16.69■□□□□ 0.26
SH2D3A-208ENST00000599563 TRIM35Q9UPQ4 493 aa16.69■□□□□ 0.26
SH2D3A-208ENST00000599563 ERVV-1B6SEH8 477 aa16.68■□□□□ 0.26
SH2D3A-208ENST00000599563 PIP4K2AP48426 406 aaPredicted RBP16.68■□□□□ 0.26
SH2D3A-208ENST00000599563 KIF6Q6ZMV9 814 aa16.68■□□□□ 0.26
SH2D3A-208ENST00000599563 TTLL6Q8N841 843 aa16.68■□□□□ 0.26
SH2D3A-208ENST00000599563 SBF1O95248 1867 aa16.67■□□□□ 0.26
SH2D3A-208ENST00000599563 HNRNPUQ00839 825 aaKnown RBP eCLIP16.67■□□□□ 0.26
SH2D3A-208ENST00000599563 CALD1Q05682 793 aaKnown RBP16.67■□□□□ 0.26
SH2D3A-208ENST00000599563 NBPF5PQ86XG9 351 aaPredicted RBP16.67■□□□□ 0.26
SH2D3A-208ENST00000599563 YTHDC1Q96MU7 727 aaKnown RBP16.67■□□□□ 0.26
SH2D3A-208ENST00000599563 GPBP1L1Q9HC44 474 aaPredicted RBP16.67■□□□□ 0.26
SH2D3A-208ENST00000599563 ARFGEF2Q9Y6D5 1785 aa16.66■□□□□ 0.26
SH2D3A-208ENST00000599563 COL11A2P13942 1736 aaPredicted RBP16.66■□□□□ 0.26
SH2D3A-208ENST00000599563 TPTE2Q6XPS3 522 aa16.66■□□□□ 0.26
SH2D3A-208ENST00000599563 NIP7Q9Y221 180 aaKnown RBP eCLIP16.66■□□□□ 0.26
SH2D3A-208ENST00000599563 CHL1O00533 1208 aa16.65■□□□□ 0.26
SH2D3A-208ENST00000599563 MAP3K15Q6ZN16 1313 aa16.65■□□□□ 0.26
SH2D3A-208ENST00000599563 NYXQ9GZU5 481 aa16.64■□□□□ 0.25
SH2D3A-208ENST00000599563 CACNA1SQ13698 1873 aa16.63■□□□□ 0.25
SH2D3A-208ENST00000599563 HOXB7P09629 217 aa16.63■□□□□ 0.25
SH2D3A-208ENST00000599563 MYL6BP14649 208 aa16.63■□□□□ 0.25
SH2D3A-208ENST00000599563 C1QTNF8P60827 252 aa16.63■□□□□ 0.25
SH2D3A-208ENST00000599563 STYK1Q6J9G0 422 aa16.63■□□□□ 0.25
SH2D3A-208ENST00000599563 CNKSR1Q969H4 720 aa16.63■□□□□ 0.25
SH2D3A-208ENST00000599563 ZNF521Q96K83 1311 aa16.63■□□□□ 0.25
SH2D3A-208ENST00000599563 GTF2E1P29083 439 aaPredicted RBP16.62■□□□□ 0.25
SH2D3A-208ENST00000599563 NGEFQ8N5V2 710 aa16.62■□□□□ 0.25
SH2D3A-208ENST00000599563 ZNF622Q969S3 477 aaKnown RBP eCLIP16.62■□□□□ 0.25
SH2D3A-208ENST00000599563 CFAP44Q96MT7 982 aa16.62■□□□□ 0.25
SH2D3A-208ENST00000599563 LAS1LQ9Y4W2 734 aaKnown RBP16.62■□□□□ 0.25
SH2D3A-208ENST00000599563 CCDC88AQ3V6T2 1871 aa16.62■□□□□ 0.25
SH2D3A-208ENST00000599563 ZC3H4Q9UPT8 1303 aaKnown RBP16.62■□□□□ 0.25
SH2D3A-208ENST00000599563 IBTKQ9P2D0 1353 aaPredicted RBP16.62■□□□□ 0.25
SH2D3A-208ENST00000599563 EIF2S2P20042 333 aaKnown RBP16.61■□□□□ 0.25
SH2D3A-208ENST00000599563 SOGA3Q5TF21 947 aa16.61■□□□□ 0.25
SH2D3A-208ENST00000599563 C9orf131Q5VYM1 1079 aa16.61■□□□□ 0.25
SH2D3A-208ENST00000599563 WWC1Q8IX03 1113 aa16.61■□□□□ 0.25
SH2D3A-208ENST00000599563 MASTLQ96GX5 879 aa16.61■□□□□ 0.25
SH2D3A-208ENST00000599563 ANKRD36CQ5JPF3 1778 aa16.61■□□□□ 0.25
SH2D3A-208ENST00000599563 FER1L6Q2WGJ9 1857 aa16.61■□□□□ 0.25
SH2D3A-208ENST00000599563 SRGNP10124 158 aa16.6■□□□□ 0.25
SH2D3A-208ENST00000599563 HLFQ16534 295 aa16.6■□□□□ 0.25
SH2D3A-208ENST00000599563 CCDC27Q2M243 656 aa16.6■□□□□ 0.25
SH2D3A-208ENST00000599563 GIGYF2Q6Y7W6 1299 aaKnown RBP16.6■□□□□ 0.25
SH2D3A-208ENST00000599563 CHMP4AQ9BY43 222 aa16.6■□□□□ 0.25
SH2D3A-208ENST00000599563 RIC1Q4ADV7 1423 aa16.6■□□□□ 0.25
SH2D3A-208ENST00000599563 DICER1Q9UPY3 1922 aaKnown RBP16.59■□□□□ 0.25
SH2D3A-208ENST00000599563 KLRG2A4D1S0 409 aaPredicted RBP16.59■□□□□ 0.25
SH2D3A-208ENST00000599563 NPR1P16066 1061 aa16.59■□□□□ 0.25
SH2D3A-208ENST00000599563 LMNB1P20700 586 aa16.59■□□□□ 0.25
SH2D3A-208ENST00000599563 GNAI1P63096 354 aa16.59■□□□□ 0.25
SH2D3A-208ENST00000599563 TTLL7Q6ZT98 887 aa16.59■□□□□ 0.25
SH2D3A-208ENST00000599563 ZNF526Q8TF50 670 aaPredicted RBP16.59■□□□□ 0.25
SH2D3A-208ENST00000599563 ZBTB3Q9H5J0 574 aa16.59■□□□□ 0.25
SH2D3A-208ENST00000599563 DDX21Q9NR30 783 aaKnown RBP eCLIP16.59■□□□□ 0.25
SH2D3A-208ENST00000599563 IFT57Q9NWB7 429 aa16.59■□□□□ 0.25
SH2D3A-208ENST00000599563 RNF181Q9P0P0 153 aa16.59■□□□□ 0.25
SH2D3A-208ENST00000599563 ZBED9Q6R2W3 1325 aa16.59■□□□□ 0.25
SH2D3A-208ENST00000599563 SLX4Q8IY92 1834 aa16.59■□□□□ 0.25
SH2D3A-208ENST00000599563 PDIA6Q15084 440 aa16.58■□□□□ 0.24
SH2D3A-208ENST00000599563 PARP10Q53GL7 1025 aa16.58■□□□□ 0.24
SH2D3A-208ENST00000599563 HSP90AB3PQ58FF7 597 aa16.58■□□□□ 0.24
SH2D3A-208ENST00000599563 CCDC24Q8N4L8 307 aa16.58■□□□□ 0.24
SH2D3A-208ENST00000599563 SPINK5Q9NQ38 1064 aaPredicted RBP16.58■□□□□ 0.24
SH2D3A-208ENST00000599563 KDM2BQ8NHM5 1336 aa16.58■□□□□ 0.24
SH2D3A-208ENST00000599563 TIAM2Q8IVF5 1701 aa16.57■□□□□ 0.24
SH2D3A-208ENST00000599563 TNRC6CQ9HCJ0 1690 aaKnown RBP16.57■□□□□ 0.24
SH2D3A-208ENST00000599563 RNF123Q5XPI4 1314 aa16.57■□□□□ 0.24
SH2D3A-208ENST00000599563 NCBP3Q53F19 620 aaKnown RBP16.57■□□□□ 0.24
SH2D3A-208ENST00000599563 PPP1R42Q7Z4L9 355 aa16.57■□□□□ 0.24
SH2D3A-208ENST00000599563 LTBP3Q9NS15 1303 aa16.56■□□□□ 0.24
SH2D3A-208ENST00000599563 FAM177BA6PVY3 158 aa16.56■□□□□ 0.24
SH2D3A-208ENST00000599563 ZNF853P0CG23 659 aa16.56■□□□□ 0.24
SH2D3A-208ENST00000599563 ALDH1B1P30837 517 aa16.56■□□□□ 0.24
SH2D3A-208ENST00000599563 HDGFL1Q5TGJ6 251 aa16.56■□□□□ 0.24
SH2D3A-208ENST00000599563 PRPF40BQ6NWY9 871 aaKnown RBP16.56■□□□□ 0.24
SH2D3A-208ENST00000599563 LRP10Q7Z4F1 713 aa16.56■□□□□ 0.24
SH2D3A-208ENST00000599563 ZNF34Q8IZ26 560 aa16.56■□□□□ 0.24
SH2D3A-208ENST00000599563 CDCA7LQ96GN5 454 aa16.56■□□□□ 0.24
SH2D3A-208ENST00000599563 DBF4Q9UBU7 674 aaPredicted RBP16.56■□□□□ 0.24
SH2D3A-208ENST00000599563 C21orf2O43822 256 aa16.55■□□□□ 0.24
SH2D3A-208ENST00000599563 MBIPQ9NS73 344 aa16.55■□□□□ 0.24
SH2D3A-208ENST00000599563 GPTP24298 496 aa16.54■□□□□ 0.24
SH2D3A-208ENST00000599563 COPS6Q7L5N1 327 aa16.54■□□□□ 0.24
SH2D3A-208ENST00000599563 HYPKQ9NX55 129 aa16.54■□□□□ 0.24
SH2D3A-208ENST00000599563 UBN2Q6ZU65 1347 aa16.53■□□□□ 0.24
SH2D3A-208ENST00000599563 NFKBIEO00221 500 aa16.53■□□□□ 0.24
SH2D3A-208ENST00000599563 RASSF7Q02833 373 aa16.53■□□□□ 0.24
SH2D3A-208ENST00000599563 PROSER3Q2NL68 480 aa16.53■□□□□ 0.24
SH2D3A-208ENST00000599563 CRY2Q49AN0 593 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms