RNA–Protein interactions for RNA: ENST00000598229.1

LINC00343-205, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-205ENST00000598229 MAP2P11137 1827 aaKnown RBP13.03□□□□□ -0.32
LINC00343-205ENST00000598229 FLT4P35916 1363 aa13.03□□□□□ -0.32
LINC00343-205ENST00000598229 KCPQ6ZWJ8 1503 aa13.03□□□□□ -0.32
LINC00343-205ENST00000598229 GYS1P13807 737 aa13.02□□□□□ -0.33
LINC00343-205ENST00000598229 ATG3Q9NT62 314 aa13.02□□□□□ -0.33
LINC00343-205ENST00000598229 RPS6KA4O75676 772 aa13.01□□□□□ -0.33
LINC00343-205ENST00000598229 VEGFAP15692 232 aaPredicted RBP13.01□□□□□ -0.33
LINC00343-205ENST00000598229 RFC4P35249 363 aa13.01□□□□□ -0.33
LINC00343-205ENST00000598229 NEUROD1Q13562 356 aa13.01□□□□□ -0.33
LINC00343-205ENST00000598229 GGNBP2Q9H3C7 697 aa13.01□□□□□ -0.33
LINC00343-205ENST00000598229 PCDHGA4Q9Y5G9 962 aa13.01□□□□□ -0.33
LINC00343-205ENST00000598229 NCAPD2Q15021 1401 aa13.01□□□□□ -0.33
LINC00343-205ENST00000598229 NUDT7P0C024 238 aa13□□□□□ -0.33
LINC00343-205ENST00000598229 RNF166Q96A37 237 aaPredicted RBP13□□□□□ -0.33
LINC00343-205ENST00000598229 TESK2Q96S53 571 aa13□□□□□ -0.33
LINC00343-205ENST00000598229 ITGB4P16144 1822 aa12.99□□□□□ -0.33
LINC00343-205ENST00000598229 N4BP2Q86UW6 1770 aaPredicted RBP12.99□□□□□ -0.33
LINC00343-205ENST00000598229 TONSLQ96HA7 1378 aa12.99□□□□□ -0.33
LINC00343-205ENST00000598229 CNTNAP4Q9C0A0 1308 aa12.99□□□□□ -0.33
LINC00343-205ENST00000598229 IFNL2Q8IZJ0 200 aa12.99□□□□□ -0.33
LINC00343-205ENST00000598229 GLTPD2A6NH11 291 aa12.98□□□□□ -0.33
LINC00343-205ENST00000598229 PHKG2P15735 406 aa12.98□□□□□ -0.33
LINC00343-205ENST00000598229 SLC4A9Q96Q91 983 aa12.98□□□□□ -0.33
LINC00343-205ENST00000598229 KDRP35968 1356 aa12.97□□□□□ -0.33
LINC00343-205ENST00000598229 C4AP0C0L4 1744 aa12.97□□□□□ -0.33
LINC00343-205ENST00000598229 ERVV-2B6SEH9 535 aa12.97□□□□□ -0.33
LINC00343-205ENST00000598229 PBX2P40425 430 aa12.97□□□□□ -0.33
LINC00343-205ENST00000598229 PKD1L3Q7Z443 1732 aa12.96□□□□□ -0.33
LINC00343-205ENST00000598229 LMNB1P20700 586 aa12.96□□□□□ -0.33
LINC00343-205ENST00000598229 RYDENQ9NUL5 291 aaKnown RBP12.96□□□□□ -0.33
LINC00343-205ENST00000598229 ARFGEF1Q9Y6D6 1849 aa12.96□□□□□ -0.33
LINC00343-205ENST00000598229 KDM6AO15550 1401 aaPredicted RBP12.96□□□□□ -0.34
LINC00343-205ENST00000598229 TNRC6CQ9HCJ0 1690 aaKnown RBP12.96□□□□□ -0.34
LINC00343-205ENST00000598229 BRCA1P38398 1863 aaKnown RBP12.95□□□□□ -0.34
LINC00343-205ENST00000598229 ST20-MTHFSA0A0A6YYL1 179 aa12.95□□□□□ -0.34
LINC00343-205ENST00000598229 PRDM10Q9NQV6 1147 aa12.95□□□□□ -0.34
LINC00343-205ENST00000598229 WASHC2AQ641Q2 1341 aa12.94□□□□□ -0.34
LINC00343-205ENST00000598229 ZNF831Q5JPB2 1677 aa12.94□□□□□ -0.34
LINC00343-205ENST00000598229 TM4SF1P30408 202 aa12.94□□□□□ -0.34
LINC00343-205ENST00000598229 EYA1Q99502 592 aa12.94□□□□□ -0.34
LINC00343-205ENST00000598229 LHX6Q9UPM6 363 aa12.94□□□□□ -0.34
LINC00343-205ENST00000598229 HSP90AB1P08238 724 aaKnown RBP12.93□□□□□ -0.34
LINC00343-205ENST00000598229 CHRNA5P30532 468 aa12.93□□□□□ -0.34
LINC00343-205ENST00000598229 FOXK1P85037 733 aa12.93□□□□□ -0.34
LINC00343-205ENST00000598229 DDR1Q08345 913 aa12.93□□□□□ -0.34
LINC00343-205ENST00000598229 ANKRD13DQ6ZTN6 518 aa12.93□□□□□ -0.34
LINC00343-205ENST00000598229 EMILIN1Q9Y6C2 1016 aa12.93□□□□□ -0.34
LINC00343-205ENST00000598229 USP42Q9H9J4 1324 aaKnown RBP12.92□□□□□ -0.34
LINC00343-205ENST00000598229 LSM11P83369 360 aaKnown RBP eCLIP12.92□□□□□ -0.34
LINC00343-205ENST00000598229 POTECB2RU33 542 aa12.91□□□□□ -0.34
LINC00343-205ENST00000598229 POLRMTO00411 1230 aaKnown RBP12.91□□□□□ -0.34
LINC00343-205ENST00000598229 GPHNQ9NQX3 736 aaPredicted RBP12.91□□□□□ -0.34
LINC00343-205ENST00000598229 CRKLP46109 303 aaKnown RBP12.9□□□□□ -0.34
LINC00343-205ENST00000598229 PTCD2Q8WV60 388 aaKnown RBP12.9□□□□□ -0.34
LINC00343-205ENST00000598229 SRP68Q9UHB9 627 aaKnown RBP12.9□□□□□ -0.34
LINC00343-205ENST00000598229 SBF1O95248 1867 aa12.89□□□□□ -0.35
LINC00343-205ENST00000598229 FOXN1O15353 648 aa12.89□□□□□ -0.35
LINC00343-205ENST00000598229 PPM1GO15355 546 aaPredicted RBP12.89□□□□□ -0.35
LINC00343-205ENST00000598229 CTCFP49711 727 aaPredicted RBP12.89□□□□□ -0.35
LINC00343-205ENST00000598229 RASSF7Q02833 373 aa12.89□□□□□ -0.35
LINC00343-205ENST00000598229 TTLL6Q8N841 843 aa12.89□□□□□ -0.35
LINC00343-205ENST00000598229 CABP4P57796 275 aa12.88□□□□□ -0.35
LINC00343-205ENST00000598229 CDCA8Q53HL2 280 aa12.88□□□□□ -0.35
LINC00343-205ENST00000598229 PLPP6Q8IY26 295 aa12.88□□□□□ -0.35
LINC00343-205ENST00000598229 CARD14Q9BXL6 1004 aa12.88□□□□□ -0.35
LINC00343-205ENST00000598229 ZPR1O75312 459 aa12.87□□□□□ -0.35
LINC00343-205ENST00000598229 INTS5Q6P9B9 1019 aaKnown RBP12.87□□□□□ -0.35
LINC00343-205ENST00000598229 CNTNAP1P78357 1384 aa12.86□□□□□ -0.35
LINC00343-205ENST00000598229 NFKBIEO00221 500 aa12.86□□□□□ -0.35
LINC00343-205ENST00000598229 PTCD1O75127 700 aaKnown RBP12.86□□□□□ -0.35
LINC00343-205ENST00000598229 AMOTQ4VCS5 1084 aa12.86□□□□□ -0.35
LINC00343-205ENST00000598229 PLEKHO1Q53GL0 409 aaPredicted RBP12.86□□□□□ -0.35
LINC00343-205ENST00000598229 POLKQ9UBT6 870 aa12.86□□□□□ -0.35
LINC00343-205ENST00000598229 MKRN1Q9UHC7 482 aaKnown RBP12.86□□□□□ -0.35
LINC00343-205ENST00000598229 COL5A3P25940 1745 aaPredicted RBP12.85□□□□□ -0.35
LINC00343-205ENST00000598229 TBC1D12O60347 775 aa12.85□□□□□ -0.35
LINC00343-205ENST00000598229 AIDAQ96BJ3 306 aa12.85□□□□□ -0.35
LINC00343-205ENST00000598229 MYH14Q7Z406 1995 aaKnown RBP12.84□□□□□ -0.35
LINC00343-205ENST00000598229 H0YIN7 160 aa12.84□□□□□ -0.35
LINC00343-205ENST00000598229 EIF4A2Q14240 407 aaKnown RBP12.84□□□□□ -0.35
LINC00343-205ENST00000598229 NFIXQ14938 502 aa12.84□□□□□ -0.35
LINC00343-205ENST00000598229 USPL1Q5W0Q7 1092 aa12.84□□□□□ -0.35
LINC00343-205ENST00000598229 WBP1LQ9NX94 342 aa12.84□□□□□ -0.35
LINC00343-205ENST00000598229 PDZRN3Q9UPQ7 1066 aa12.84□□□□□ -0.35
LINC00343-205ENST00000598229 MTHFSP49914 203 aa12.83□□□□□ -0.36
LINC00343-205ENST00000598229 DSG2Q14126 1118 aa12.83□□□□□ -0.36
LINC00343-205ENST00000598229 C2CD5Q86YS7 1000 aa12.83□□□□□ -0.36
LINC00343-205ENST00000598229 NFATC2IPQ8NCF5 419 aa12.83□□□□□ -0.36
LINC00343-205ENST00000598229 NARFQ9UHQ1 456 aa12.83□□□□□ -0.36
LINC00343-205ENST00000598229 SERPINB2P05120 415 aa12.82□□□□□ -0.36
LINC00343-205ENST00000598229 ERFEQ4G0M1 354 aa12.82□□□□□ -0.36
LINC00343-205ENST00000598229 ZNF530Q6P9A1 599 aaPredicted RBP12.82□□□□□ -0.36
LINC00343-205ENST00000598229 SOS1Q07889 1333 aaPredicted RBP12.82□□□□□ -0.36
LINC00343-205ENST00000598229 PASKQ96RG2 1323 aa12.82□□□□□ -0.36
LINC00343-205ENST00000598229 LTBP3Q9NS15 1303 aa12.82□□□□□ -0.36
LINC00343-205ENST00000598229 VEGFBP49765 207 aa12.81□□□□□ -0.36
LINC00343-205ENST00000598229 RGS19P49795 217 aa12.81□□□□□ -0.36
LINC00343-205ENST00000598229 ABHD8Q96I13 439 aa12.81□□□□□ -0.36
LINC00343-205ENST00000598229 ANKRD26Q9UPS8 1709 aa12.81□□□□□ -0.36
LINC00343-205ENST00000598229 IQCA1LA6NCM1 817 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 224.1 ms