RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 ADRA2BP18089 450 aa11.88□□□□□ -0.51
ZNF548-206ENST00000597047 GPTP24298 496 aa11.88□□□□□ -0.51
ZNF548-206ENST00000597047 HLFQ16534 295 aa11.88□□□□□ -0.51
ZNF548-206ENST00000597047 KLHL34Q8N239 644 aa11.88□□□□□ -0.51
ZNF548-206ENST00000597047 NARFQ9UHQ1 456 aa11.88□□□□□ -0.51
ZNF548-206ENST00000597047 RARSP54136 660 aaKnown RBP11.87□□□□□ -0.51
ZNF548-206ENST00000597047 FLIIQ13045 1269 aa11.87□□□□□ -0.51
ZNF548-206ENST00000597047 SLC4A10Q6U841 1118 aa11.87□□□□□ -0.51
ZNF548-206ENST00000597047 ANKRD13DQ6ZTN6 518 aa11.87□□□□□ -0.51
ZNF548-206ENST00000597047 NOB1Q9ULX3 412 aaKnown RBP11.87□□□□□ -0.51
ZNF548-206ENST00000597047 MAP3K15Q6ZN16 1313 aa11.86□□□□□ -0.51
ZNF548-206ENST00000597047 CICQ96RK0 1608 aaPredicted RBP11.86□□□□□ -0.51
ZNF548-206ENST00000597047 CAMTA2O94983 1202 aa11.86□□□□□ -0.51
ZNF548-206ENST00000597047 CENPBP07199 599 aaPredicted RBP11.86□□□□□ -0.51
ZNF548-206ENST00000597047 CT47B1P0C2W7 299 aaPredicted RBP11.86□□□□□ -0.51
ZNF548-206ENST00000597047 GYS1P13807 737 aa11.86□□□□□ -0.51
ZNF548-206ENST00000597047 FKBP8Q14318 412 aa11.86□□□□□ -0.51
ZNF548-206ENST00000597047 ALDH1L2Q3SY69 923 aa11.86□□□□□ -0.51
ZNF548-206ENST00000597047 MYD88Q99836 296 aa11.86□□□□□ -0.51
ZNF548-206ENST00000597047 PPP1R1BQ9UD71 204 aaPredicted RBP11.86□□□□□ -0.51
ZNF548-206ENST00000597047 RCAN3Q9UKA8 241 aa11.86□□□□□ -0.51
ZNF548-206ENST00000597047 ZNF652Q9Y2D9 606 aa11.86□□□□□ -0.51
ZNF548-206ENST00000597047 MAP3K2Q9Y2U5 619 aa11.86□□□□□ -0.51
ZNF548-206ENST00000597047 USP42Q9H9J4 1324 aaKnown RBP11.86□□□□□ -0.51
ZNF548-206ENST00000597047 PI4KAP2A4QPH2 592 aa11.85□□□□□ -0.51
ZNF548-206ENST00000597047 F6X3S4 739 aa11.85□□□□□ -0.51
ZNF548-206ENST00000597047 ATP5J2-PTCD1G3V325 749 aa11.85□□□□□ -0.51
ZNF548-206ENST00000597047 TBC1D9BQ66K14 1250 aa11.85□□□□□ -0.51
ZNF548-206ENST00000597047 PI4KAP1Q8N8J0 262 aa11.85□□□□□ -0.51
ZNF548-206ENST00000597047 NIP7Q9Y221 180 aaKnown RBP eCLIP11.85□□□□□ -0.51
ZNF548-206ENST00000597047 C4AP0C0L4 1744 aa11.84□□□□□ -0.51
ZNF548-206ENST00000597047 POLD1P28340 1107 aa11.84□□□□□ -0.51
ZNF548-206ENST00000597047 GTF2E1P29083 439 aaPredicted RBP11.84□□□□□ -0.51
ZNF548-206ENST00000597047 RTL5Q5HYW3 569 aaPredicted RBP11.84□□□□□ -0.51
ZNF548-206ENST00000597047 KSR2Q6VAB6 950 aa11.84□□□□□ -0.51
ZNF548-206ENST00000597047 LRP10Q7Z4F1 713 aa11.84□□□□□ -0.51
ZNF548-206ENST00000597047 NLGN1Q8N2Q7 840 aa11.84□□□□□ -0.51
ZNF548-206ENST00000597047 CCDC24Q8N4L8 307 aa11.84□□□□□ -0.51
ZNF548-206ENST00000597047 PLBD2Q8NHP8 589 aa11.84□□□□□ -0.51
ZNF548-206ENST00000597047 CLUAP1Q96AJ1 413 aa11.84□□□□□ -0.51
ZNF548-206ENST00000597047 SETDB2Q96T68 719 aa11.84□□□□□ -0.51
ZNF548-206ENST00000597047 BCL2L12Q9HB09 334 aa11.84□□□□□ -0.51
ZNF548-206ENST00000597047 PARP3Q9Y6F1 533 aa11.84□□□□□ -0.51
ZNF548-206ENST00000597047 PLIN1O60240 522 aa11.83□□□□□ -0.52
ZNF548-206ENST00000597047 MMP10P09238 476 aa11.83□□□□□ -0.52
ZNF548-206ENST00000597047 NEXNQ0ZGT2 675 aa11.83□□□□□ -0.52
ZNF548-206ENST00000597047 GIGYF2Q6Y7W6 1299 aaKnown RBP11.83□□□□□ -0.52
ZNF548-206ENST00000597047 SLC16A10Q8TF71 515 aa11.83□□□□□ -0.52
ZNF548-206ENST00000597047 MTFR1LQ9H019 292 aa11.83□□□□□ -0.52
ZNF548-206ENST00000597047 SPON1Q9HCB6 807 aa11.83□□□□□ -0.52
ZNF548-206ENST00000597047 QSER1Q2KHR3 1735 aa11.83□□□□□ -0.52
ZNF548-206ENST00000597047 NUP98P52948 1817 aa11.82□□□□□ -0.52
ZNF548-206ENST00000597047 CACNA1FO60840 1977 aa11.82□□□□□ -0.52
ZNF548-206ENST00000597047 ERVV-1B6SEH8 477 aa11.82□□□□□ -0.52
ZNF548-206ENST00000597047 IPO8O15397 1037 aaKnown RBP11.82□□□□□ -0.52
ZNF548-206ENST00000597047 NFIXQ14938 502 aa11.82□□□□□ -0.52
ZNF548-206ENST00000597047 DNAAF4Q8WXU2 420 aa11.82□□□□□ -0.52
ZNF548-206ENST00000597047 JARID2Q92833 1246 aaPredicted RBP11.82□□□□□ -0.52
ZNF548-206ENST00000597047 TNNQ9UQP3 1299 aa11.82□□□□□ -0.52
ZNF548-206ENST00000597047 TCIRG1Q13488 830 aa11.81□□□□□ -0.52
ZNF548-206ENST00000597047 HSP90AB3PQ58FF7 597 aa11.81□□□□□ -0.52
ZNF548-206ENST00000597047 ZKSCAN2Q63HK3 967 aa11.81□□□□□ -0.52
ZNF548-206ENST00000597047 NBPF5PQ86XG9 351 aaPredicted RBP11.81□□□□□ -0.52
ZNF548-206ENST00000597047 ADCY9O60503 1353 aa11.8□□□□□ -0.52
ZNF548-206ENST00000597047 CASZ1Q86V15 1759 aa11.8□□□□□ -0.52
ZNF548-206ENST00000597047 SERPINB2P05120 415 aa11.8□□□□□ -0.52
ZNF548-206ENST00000597047 CWF19L2Q2TBE0 894 aaKnown RBP11.8□□□□□ -0.52
ZNF548-206ENST00000597047 CLEC4GQ6UXB4 293 aa11.8□□□□□ -0.52
ZNF548-206ENST00000597047 FTSJ3Q8IY81 847 aaKnown RBP11.8□□□□□ -0.52
ZNF548-206ENST00000597047 METTL22Q9BUU2 404 aaPredicted RBP11.8□□□□□ -0.52
ZNF548-206ENST00000597047 API5Q9BZZ5 524 aaKnown RBP11.8□□□□□ -0.52
ZNF548-206ENST00000597047 PTPRCP08575 1304 aa11.8□□□□□ -0.52
ZNF548-206ENST00000597047 KIF16BQ96L93 1317 aa11.8□□□□□ -0.52
ZNF548-206ENST00000597047 ARFGEF2Q9Y6D5 1785 aa11.79□□□□□ -0.52
ZNF548-206ENST00000597047 TM4SF1P30408 202 aa11.79□□□□□ -0.52
ZNF548-206ENST00000597047 DDR1Q08345 913 aa11.79□□□□□ -0.52
ZNF548-206ENST00000597047 SUSD4Q5VX71 490 aa11.79□□□□□ -0.52
ZNF548-206ENST00000597047 PPP1R42Q7Z4L9 355 aa11.79□□□□□ -0.52
ZNF548-206ENST00000597047 NUTM1Q86Y26 1132 aa11.79□□□□□ -0.52
ZNF548-206ENST00000597047 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.79□□□□□ -0.52
ZNF548-206ENST00000597047 TRMT112Q9UI30 125 aaKnown RBP11.79□□□□□ -0.52
ZNF548-206ENST00000597047 BCORQ6W2J9 1755 aa11.79□□□□□ -0.52
ZNF548-206ENST00000597047 SCN7AQ01118 1682 aa11.78□□□□□ -0.52
ZNF548-206ENST00000597047 ATF7IPQ6VMQ6 1270 aa11.78□□□□□ -0.52
ZNF548-206ENST00000597047 TPTE2Q6XPS3 522 aa11.78□□□□□ -0.52
ZNF548-206ENST00000597047 NLRP10Q86W26 655 aa11.78□□□□□ -0.52
ZNF548-206ENST00000597047 ZNF34Q8IZ26 560 aa11.78□□□□□ -0.52
ZNF548-206ENST00000597047 UTP14AQ9BVJ6 771 aaKnown RBP11.78□□□□□ -0.52
ZNF548-206ENST00000597047 SRCIN1Q9C0H9 1055 aa11.78□□□□□ -0.52
ZNF548-206ENST00000597047 CWC25Q9NXE8 425 aaPredicted RBP11.78□□□□□ -0.52
ZNF548-206ENST00000597047 WWC3Q9ULE0 1092 aa11.78□□□□□ -0.52
ZNF548-206ENST00000597047 SUPT16HQ9Y5B9 1047 aaKnown RBP11.78□□□□□ -0.52
ZNF548-206ENST00000597047 AFDNP55196 1824 aaKnown RBP11.78□□□□□ -0.52
ZNF548-206ENST00000597047 POLRMTO00411 1230 aaKnown RBP11.77□□□□□ -0.53
ZNF548-206ENST00000597047 ST5P78524 1137 aa11.77□□□□□ -0.53
ZNF548-206ENST00000597047 ERFEQ4G0M1 354 aa11.77□□□□□ -0.53
ZNF548-206ENST00000597047 SYNE4Q8N205 404 aa11.77□□□□□ -0.53
ZNF548-206ENST00000597047 CNBD1Q8NA66 436 aa11.77□□□□□ -0.53
ZNF548-206ENST00000597047 PANK1Q8TE04 598 aa11.77□□□□□ -0.53
ZNF548-206ENST00000597047 FAM89AQ96GI7 184 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms