RNA–Protein interactions for RNA: ENST00000596828.1

LINC01440-203, Transcript of long intergenic non-protein coding RNA 1440, humanhuman

TSL 5 BASIC

Gene LINC01440, Length 1,005 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01440-203ENST00000596828 WDR43Q15061 677 aaKnown RBP eCLIP13.07□□□□□ -0.32
LINC01440-203ENST00000596828 NEUROD2Q15784 382 aa13.07□□□□□ -0.32
LINC01440-203ENST00000596828 NPM2Q86SE8 214 aaKnown RBP13.07□□□□□ -0.32
LINC01440-203ENST00000596828 PRKRIP1Q9H875 184 aaPredicted RBP13.07□□□□□ -0.32
LINC01440-203ENST00000596828 TBC1D2BQ9UPU7 963 aa13.07□□□□□ -0.32
LINC01440-203ENST00000596828 RRP7AQ9Y3A4 280 aaKnown RBP13.07□□□□□ -0.32
LINC01440-203ENST00000596828 SCN7AQ01118 1682 aa13.07□□□□□ -0.32
LINC01440-203ENST00000596828 BCORQ6W2J9 1755 aa13.07□□□□□ -0.32
LINC01440-203ENST00000596828 C10orf71Q711Q0 1435 aa13.06□□□□□ -0.32
LINC01440-203ENST00000596828 PXDNLA1KZ92 1463 aa13.06□□□□□ -0.32
LINC01440-203ENST00000596828 GRIN3BO60391 1043 aa13.06□□□□□ -0.32
LINC01440-203ENST00000596828 EIF5P55010 431 aaKnown RBP13.06□□□□□ -0.32
LINC01440-203ENST00000596828 RIPK4P57078 832 aa13.06□□□□□ -0.32
LINC01440-203ENST00000596828 BCL2L12Q9HB09 334 aa13.06□□□□□ -0.32
LINC01440-203ENST00000596828 POLRMTO00411 1230 aaKnown RBP13.05□□□□□ -0.32
LINC01440-203ENST00000596828 GABBR2O75899 941 aa13.05□□□□□ -0.32
LINC01440-203ENST00000596828 SNRPA1P09661 255 aaKnown RBP13.05□□□□□ -0.32
LINC01440-203ENST00000596828 DPEP1P16444 411 aa13.05□□□□□ -0.32
LINC01440-203ENST00000596828 TM4SF1P30408 202 aa13.05□□□□□ -0.32
LINC01440-203ENST00000596828 NFIXQ14938 502 aa13.05□□□□□ -0.32
LINC01440-203ENST00000596828 BCS1LQ9Y276 419 aa13.05□□□□□ -0.32
LINC01440-203ENST00000596828 CACNA1SQ13698 1873 aa13.05□□□□□ -0.32
LINC01440-203ENST00000596828 A0A087WZG4 1122 aa13.04□□□□□ -0.32
LINC01440-203ENST00000596828 IL6STP40189 918 aaPredicted RBP13.04□□□□□ -0.32
LINC01440-203ENST00000596828 TMPOP42166 694 aaKnown RBP13.04□□□□□ -0.32
LINC01440-203ENST00000596828 TGFB2P61812 414 aa13.04□□□□□ -0.32
LINC01440-203ENST00000596828 ZNF784Q8NCA9 323 aaPredicted RBP13.04□□□□□ -0.32
LINC01440-203ENST00000596828 ADAMTS8Q9UP79 889 aa13.04□□□□□ -0.32
LINC01440-203ENST00000596828 NRXN2Q9P2S2 1712 aa13.04□□□□□ -0.32
LINC01440-203ENST00000596828 ARFGEF1Q9Y6D6 1849 aa13.04□□□□□ -0.32
LINC01440-203ENST00000596828 CHRNA5P30532 468 aa13.03□□□□□ -0.32
LINC01440-203ENST00000596828 TPRNQ4KMQ1 711 aa13.03□□□□□ -0.32
LINC01440-203ENST00000596828 TBC1D9BQ66K14 1250 aa13.03□□□□□ -0.32
LINC01440-203ENST00000596828 ANKRD31Q8N7Z5 1873 aa13.03□□□□□ -0.32
LINC01440-203ENST00000596828 NUP98P52948 1817 aa13.02□□□□□ -0.32
LINC01440-203ENST00000596828 ZNF316A6NFI3 1004 aaPredicted RBP13.02□□□□□ -0.33
LINC01440-203ENST00000596828 SERPINB2P05120 415 aa13.02□□□□□ -0.33
LINC01440-203ENST00000596828 DZIP3Q86Y13 1208 aaKnown RBP13.02□□□□□ -0.33
LINC01440-203ENST00000596828 CCDC24Q8N4L8 307 aa13.02□□□□□ -0.33
LINC01440-203ENST00000596828 NGEFQ8N5V2 710 aa13.02□□□□□ -0.33
LINC01440-203ENST00000596828 SPRYD3Q8NCJ5 442 aa13.02□□□□□ -0.33
LINC01440-203ENST00000596828 PNISRQ8TF01 805 aaKnown RBP13.02□□□□□ -0.33
LINC01440-203ENST00000596828 RUNDC1Q96C34 613 aa13.02□□□□□ -0.33
LINC01440-203ENST00000596828 DLEC1Q9Y238 1755 aa13.02□□□□□ -0.33
LINC01440-203ENST00000596828 NBPF26B4DH59 902 aa13.01□□□□□ -0.33
LINC01440-203ENST00000596828 NBPF10Q6P3W6 841 aaKnown RBP13.01□□□□□ -0.33
LINC01440-203ENST00000596828 NBPF15Q8N660 670 aa13.01□□□□□ -0.33
LINC01440-203ENST00000596828 TSPYL4Q9UJ04 414 aa13.01□□□□□ -0.33
LINC01440-203ENST00000596828 LAS1LQ9Y4W2 734 aaKnown RBP13.01□□□□□ -0.33
LINC01440-203ENST00000596828 CCDC88AQ3V6T2 1871 aa13.01□□□□□ -0.33
LINC01440-203ENST00000596828 SENP3-EIF4A1A0A087X0R7 540 aa13□□□□□ -0.33
LINC01440-203ENST00000596828 RGL2O15211 777 aa13□□□□□ -0.33
LINC01440-203ENST00000596828 NPHP1O15259 732 aa13□□□□□ -0.33
LINC01440-203ENST00000596828 CAMTA2O94983 1202 aa13□□□□□ -0.33
LINC01440-203ENST00000596828 KCNA3P22001 575 aa13□□□□□ -0.33
LINC01440-203ENST00000596828 EIF4A1P60842 406 aaKnown RBP13□□□□□ -0.33
LINC01440-203ENST00000596828 ARHGAP27Q6ZUM4 889 aa13□□□□□ -0.33
LINC01440-203ENST00000596828 CARMIL3Q8ND23 1372 aa12.99□□□□□ -0.33
LINC01440-203ENST00000596828 GIGYF1O75420 1035 aaPredicted RBP12.99□□□□□ -0.33
LINC01440-203ENST00000596828 MYL6BP14649 208 aa12.99□□□□□ -0.33
LINC01440-203ENST00000596828 LMOD3Q0VAK6 560 aa12.99□□□□□ -0.33
LINC01440-203ENST00000596828 PIM2Q9P1W9 311 aa12.99□□□□□ -0.33
LINC01440-203ENST00000596828 COL11A2P13942 1736 aaPredicted RBP12.99□□□□□ -0.33
LINC01440-203ENST00000596828 SBF1O95248 1867 aa12.98□□□□□ -0.33
LINC01440-203ENST00000596828 CCDC184Q52MB2 194 aa12.98□□□□□ -0.33
LINC01440-203ENST00000596828 ZNF526Q8TF50 670 aaPredicted RBP12.98□□□□□ -0.33
LINC01440-203ENST00000596828 SETDB2Q96T68 719 aa12.98□□□□□ -0.33
LINC01440-203ENST00000596828 FAM177BA6PVY3 158 aa12.97□□□□□ -0.33
LINC01440-203ENST00000596828 EIF2S2P20042 333 aaKnown RBP12.97□□□□□ -0.33
LINC01440-203ENST00000596828 DALRD3Q5D0E6 543 aaKnown RBP12.97□□□□□ -0.33
LINC01440-203ENST00000596828 C2CD5Q86YS7 1000 aa12.97□□□□□ -0.33
LINC01440-203ENST00000596828 NECTIN2Q92692 538 aa12.97□□□□□ -0.33
LINC01440-203ENST00000596828 TRIM35Q9UPQ4 493 aa12.97□□□□□ -0.33
LINC01440-203ENST00000596828 MNX1P50219 401 aaPredicted RBP12.96□□□□□ -0.33
LINC01440-203ENST00000596828 PRR5LQ6MZQ0 368 aa12.96□□□□□ -0.33
LINC01440-203ENST00000596828 ATP10DQ9P241 1426 aa12.96□□□□□ -0.34
LINC01440-203ENST00000596828 H0YIN7 160 aa12.95□□□□□ -0.34
LINC01440-203ENST00000596828 APAF1O14727 1248 aa12.95□□□□□ -0.34
LINC01440-203ENST00000596828 HLFQ16534 295 aa12.95□□□□□ -0.34
LINC01440-203ENST00000596828 KRT24Q2M2I5 525 aa12.95□□□□□ -0.34
LINC01440-203ENST00000596828 CNBD1Q8NA66 436 aa12.95□□□□□ -0.34
LINC01440-203ENST00000596828 ZNF652Q9Y2D9 606 aa12.95□□□□□ -0.34
LINC01440-203ENST00000596828 ANP32CO43423 234 aa12.94□□□□□ -0.34
LINC01440-203ENST00000596828 ANXA1P04083 346 aa12.94□□□□□ -0.34
LINC01440-203ENST00000596828 TTLL7Q6ZT98 887 aa12.94□□□□□ -0.34
LINC01440-203ENST00000596828 NBPF5PQ86XG9 351 aaPredicted RBP12.94□□□□□ -0.34
LINC01440-203ENST00000596828 ZNF622Q969S3 477 aaKnown RBP eCLIP12.94□□□□□ -0.34
LINC01440-203ENST00000596828 ZBTB3Q9H5J0 574 aa12.94□□□□□ -0.34
LINC01440-203ENST00000596828 NIP7Q9Y221 180 aaKnown RBP eCLIP12.94□□□□□ -0.34
LINC01440-203ENST00000596828 SLX4Q8IY92 1834 aa12.93□□□□□ -0.34
LINC01440-203ENST00000596828 PDE6BP35913 854 aa12.93□□□□□ -0.34
LINC01440-203ENST00000596828 ST5P78524 1137 aa12.93□□□□□ -0.34
LINC01440-203ENST00000596828 CLEC4GQ6UXB4 293 aa12.93□□□□□ -0.34
LINC01440-203ENST00000596828 KIF6Q6ZMV9 814 aa12.93□□□□□ -0.34
LINC01440-203ENST00000596828 ZNF579Q8NAF0 562 aaKnown RBP12.93□□□□□ -0.34
LINC01440-203ENST00000596828 ANKRD36CQ5JPF3 1778 aa12.92□□□□□ -0.34
LINC01440-203ENST00000596828 PROSER3Q2NL68 480 aa12.92□□□□□ -0.34
LINC01440-203ENST00000596828 TTLL6Q8N841 843 aa12.92□□□□□ -0.34
LINC01440-203ENST00000596828 BRIP1Q9BX63 1249 aa12.92□□□□□ -0.34
LINC01440-203ENST00000596828 MRS2Q9HD23 443 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms