RNA–Protein interactions for RNA: ENST00000595786.5

ZNF558-203, Transcript of zinc finger protein 558, humanhuman

TSL 3

Gene ZNF558, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-203ENST00000595786 ERVV-1B6SEH8 477 aa33.31■■■□□ 2.92
ZNF558-203ENST00000595786 C9orf131Q5VYM1 1079 aa33.31■■■□□ 2.92
ZNF558-203ENST00000595786 NBPF5PQ86XG9 351 aaPredicted RBP33.3■■■□□ 2.92
ZNF558-203ENST00000595786 ZNF526Q8TF50 670 aaPredicted RBP33.3■■■□□ 2.92
ZNF558-203ENST00000595786 TPTE2Q6XPS3 522 aa33.29■■■□□ 2.92
ZNF558-203ENST00000595786 NIP7Q9Y221 180 aaKnown RBP eCLIP33.29■■■□□ 2.92
ZNF558-203ENST00000595786 RRP7AQ9Y3A4 280 aaKnown RBP33.28■■■□□ 2.92
ZNF558-203ENST00000595786 ZNF622Q969S3 477 aaKnown RBP eCLIP33.27■■■□□ 2.921e-6■□□□□ 10.8
ZNF558-203ENST00000595786 NEUROD2Q15784 382 aa33.26■■■□□ 2.91
ZNF558-203ENST00000595786 HLFQ16534 295 aa33.26■■■□□ 2.91
ZNF558-203ENST00000595786 STYK1Q6J9G0 422 aa33.26■■■□□ 2.91
ZNF558-203ENST00000595786 CCDC24Q8N4L8 307 aa33.26■■■□□ 2.91
ZNF558-203ENST00000595786 TRIM35Q9UPQ4 493 aa33.26■■■□□ 2.91
ZNF558-203ENST00000595786 MAP3K15Q6ZN16 1313 aa33.26■■■□□ 2.91
ZNF558-203ENST00000595786 CHL1O00533 1208 aa33.25■■■□□ 2.91
ZNF558-203ENST00000595786 CNKSR1Q969H4 720 aa33.25■■■□□ 2.91
ZNF558-203ENST00000595786 SRGNP10124 158 aa33.24■■■□□ 2.91
ZNF558-203ENST00000595786 KIF6Q6ZMV9 814 aa33.24■■■□□ 2.91
ZNF558-203ENST00000595786 NGEFQ8N5V2 710 aa33.24■■■□□ 2.91
ZNF558-203ENST00000595786 RNF181Q9P0P0 153 aa33.24■■■□□ 2.91
ZNF558-203ENST00000595786 SBF1O95248 1867 aa33.24■■■□□ 2.91
ZNF558-203ENST00000595786 MASTLQ96GX5 879 aa33.23■■■□□ 2.91
ZNF558-203ENST00000595786 KLRG2A4D1S0 409 aaPredicted RBP33.22■■■□□ 2.91
ZNF558-203ENST00000595786 MYL6BP14649 208 aa33.22■■■□□ 2.91
ZNF558-203ENST00000595786 ZC3H4Q9UPT8 1303 aaKnown RBP33.22■■■□□ 2.91
ZNF558-203ENST00000595786 KIF3CO14782 793 aa33.21■■■□□ 2.91
ZNF558-203ENST00000595786 LMNB1P20700 586 aa33.2■■■□□ 2.91
ZNF558-203ENST00000595786 TTLL7Q6ZT98 887 aa33.2■■■□□ 2.91
ZNF558-203ENST00000595786 SENP3-EIF4A1A0A087X0R7 540 aa33.19■■■□□ 2.9
ZNF558-203ENST00000595786 NYXQ9GZU5 481 aa33.19■■■□□ 2.9
ZNF558-203ENST00000595786 EIF2S2P20042 333 aaKnown RBP33.18■■■□□ 2.9
ZNF558-203ENST00000595786 PDIA6Q15084 440 aa33.18■■■□□ 2.9
ZNF558-203ENST00000595786 COL11A2P13942 1736 aaPredicted RBP33.18■■■□□ 2.9
ZNF558-203ENST00000595786 NUP98P52948 1817 aa33.18■■■□□ 2.9
ZNF558-203ENST00000595786 RASSF7Q02833 373 aa33.17■■■□□ 2.9
ZNF558-203ENST00000595786 LRP10Q7Z4F1 713 aa33.17■■■□□ 2.9
ZNF558-203ENST00000595786 NPR1P16066 1061 aa33.16■■■□□ 2.9
ZNF558-203ENST00000595786 GTF2E1P29083 439 aaPredicted RBP33.16■■■□□ 2.9
ZNF558-203ENST00000595786 SOGA3Q5TF21 947 aa33.16■■■□□ 2.9
ZNF558-203ENST00000595786 GIGYF2Q6Y7W6 1299 aaKnown RBP33.16■■■□□ 2.9
ZNF558-203ENST00000595786 KDM2BQ8NHM5 1336 aa33.16■■■□□ 2.9
ZNF558-203ENST00000595786 C21orf2O43822 256 aa33.15■■■□□ 2.9
ZNF558-203ENST00000595786 CFAP44Q96MT7 982 aa33.15■■■□□ 2.9
ZNF558-203ENST00000595786 IBTKQ9P2D0 1353 aaPredicted RBP33.14■■■□□ 2.9
ZNF558-203ENST00000595786 NFKBIEO00221 500 aa33.14■■■□□ 2.9
ZNF558-203ENST00000595786 ZBTB3Q9H5J0 574 aa33.14■■■□□ 2.9
ZNF558-203ENST00000595786 HOXB7P09629 217 aa33.13■■■□□ 2.89
ZNF558-203ENST00000595786 PRPF40BQ6NWY9 871 aaKnown RBP33.13■■■□□ 2.89
ZNF558-203ENST00000595786 ZNF34Q8IZ26 560 aa33.13■■■□□ 2.89
ZNF558-203ENST00000595786 LAS1LQ9Y4W2 734 aaKnown RBP33.13■■■□□ 2.89
ZNF558-203ENST00000595786 LTBP3Q9NS15 1303 aa33.12■■■□□ 2.89
ZNF558-203ENST00000595786 ZNF316A6NFI3 1004 aaPredicted RBP33.12■■■□□ 2.89
ZNF558-203ENST00000595786 FAM177BA6PVY3 158 aa33.12■■■□□ 2.89
ZNF558-203ENST00000595786 CALD1Q05682 793 aaKnown RBP33.11■■■□□ 2.89
ZNF558-203ENST00000595786 SLX4Q8IY92 1834 aa33.11■■■□□ 2.89
ZNF558-203ENST00000595786 APAF1O14727 1248 aa33.1■■■□□ 2.89
ZNF558-203ENST00000595786 TOMM70O94826 608 aa33.1■■■□□ 2.89
ZNF558-203ENST00000595786 PRELPP51888 382 aa33.1■■■□□ 2.89
ZNF558-203ENST00000595786 NMRK2Q9NPI5 230 aa33.1■■■□□ 2.89
ZNF558-203ENST00000595786 DDX21Q9NR30 783 aaKnown RBP eCLIP33.1■■■□□ 2.89
ZNF558-203ENST00000595786 ARFGEF2Q9Y6D5 1785 aa33.1■■■□□ 2.89
ZNF558-203ENST00000595786 ALDH1B1P30837 517 aa33.09■■■□□ 2.89
ZNF558-203ENST00000595786 PARP10Q53GL7 1025 aa33.09■■■□□ 2.89
ZNF558-203ENST00000595786 C7orf43Q8WVR3 580 aa33.09■■■□□ 2.89
ZNF558-203ENST00000595786 FER1L6Q2WGJ9 1857 aa33.09■■■□□ 2.89
ZNF558-203ENST00000595786 PROSER3Q2NL68 480 aa33.08■■■□□ 2.89
ZNF558-203ENST00000595786 ZNF219Q9P2Y4 722 aaPredicted RBP33.08■■■□□ 2.89
ZNF558-203ENST00000595786 RIC1Q4ADV7 1423 aa33.08■■■□□ 2.89
ZNF558-203ENST00000595786 UBN2Q6ZU65 1347 aa33.07■■■□□ 2.88
ZNF558-203ENST00000595786 ZNF853P0CG23 659 aa33.07■■■□□ 2.88
ZNF558-203ENST00000595786 CRY2Q49AN0 593 aa33.07■■■□□ 2.88
ZNF558-203ENST00000595786 PPP1R42Q7Z4L9 355 aa33.07■■■□□ 2.88
ZNF558-203ENST00000595786 CCDC88AQ3V6T2 1871 aa33.06■■■□□ 2.88
ZNF558-203ENST00000595786 GPTP24298 496 aa33.06■■■□□ 2.88
ZNF558-203ENST00000595786 SUSD4Q5VX71 490 aa33.06■■■□□ 2.88
ZNF558-203ENST00000595786 TAOK3Q9H2K8 898 aa33.06■■■□□ 2.88
ZNF558-203ENST00000595786 GLTPD2A6NH11 291 aa33.05■■■□□ 2.88
ZNF558-203ENST00000595786 KRT24Q2M2I5 525 aa33.05■■■□□ 2.88
ZNF558-203ENST00000595786 HSP90AB3PQ58FF7 597 aa33.05■■■□□ 2.88
ZNF558-203ENST00000595786 COPS6Q7L5N1 327 aa33.05■■■□□ 2.88
ZNF558-203ENST00000595786 ANXA1P04083 346 aa33.04■■■□□ 2.88
ZNF558-203ENST00000595786 HSPA6P17066 643 aa33.04■■■□□ 2.88
ZNF558-203ENST00000595786 ERFEQ4G0M1 354 aa33.04■■■□□ 2.88
ZNF558-203ENST00000595786 NUTM1Q86Y26 1132 aa33.04■■■□□ 2.88
ZNF558-203ENST00000595786 IFT57Q9NWB7 429 aa33.04■■■□□ 2.88
ZNF558-203ENST00000595786 GNAI1P63096 354 aa33.03■■■□□ 2.88
ZNF558-203ENST00000595786 CCDC93Q567U6 631 aa33.03■■■□□ 2.88
ZNF558-203ENST00000595786 HDGFL1Q5TGJ6 251 aa33.03■■■□□ 2.88
ZNF558-203ENST00000595786 XAGE3Q8WTP9 111 aa33.03■■■□□ 2.88
ZNF558-203ENST00000595786 NECTIN2Q92692 538 aa33.03■■■□□ 2.88
ZNF558-203ENST00000595786 MBIPQ9NS73 344 aa33.03■■■□□ 2.88
ZNF558-203ENST00000595786 NTSR2O95665 410 aa33.02■■■□□ 2.88
ZNF558-203ENST00000595786 CACNA1SQ13698 1873 aa33.01■■■□□ 2.88
ZNF558-203ENST00000595786 ABCC12Q96J65 1359 aa33.01■■■□□ 2.88
ZNF558-203ENST00000595786 DICER1Q9UPY3 1922 aaKnown RBP33.01■■■□□ 2.88
ZNF558-203ENST00000595786 C16orf71Q8IYS4 520 aaPredicted RBP33.01■■■□□ 2.87
ZNF558-203ENST00000595786 RBM46Q8TBY0 533 aaKnown RBP33.01■■■□□ 2.87
ZNF558-203ENST00000595786 DBF4Q9UBU7 674 aaPredicted RBP33.01■■■□□ 2.87
ZNF558-203ENST00000595786 RNF123Q5XPI4 1314 aa33.01■■■□□ 2.87
ZNF558-203ENST00000595786 HOXA10P31260 410 aaPredicted RBP33■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms