RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 LMOD3Q0VAK6 560 aa30.65■■■□□ 2.5
MBD3-211ENST00000592965 CCDC88AQ3V6T2 1871 aa30.65■■■□□ 2.5
MBD3-211ENST00000592965 RASSF7Q02833 373 aa30.64■■■□□ 2.5
MBD3-211ENST00000592965 NBPF5PQ86XG9 351 aaPredicted RBP30.64■■■□□ 2.5
MBD3-211ENST00000592965 ZC3H4Q9UPT8 1303 aaKnown RBP30.64■■■□□ 2.5
MBD3-211ENST00000592965 NUP98P52948 1817 aa30.63■■■□□ 2.49
MBD3-211ENST00000592965 ZNF622Q969S3 477 aaKnown RBP eCLIP30.63■■■□□ 2.49
MBD3-211ENST00000592965 CACNA1SQ13698 1873 aa30.63■■■□□ 2.49
MBD3-211ENST00000592965 FER1L6Q2WGJ9 1857 aa30.63■■■□□ 2.49
MBD3-211ENST00000592965 BABAM1Q9NWV8 329 aa30.62■■■□□ 2.49
MBD3-211ENST00000592965 TSPYL4Q9UJ04 414 aa30.62■■■□□ 2.49
MBD3-211ENST00000592965 TNRC6CQ9HCJ0 1690 aaKnown RBP30.62■■■□□ 2.49
MBD3-211ENST00000592965 LMNB1P20700 586 aa30.61■■■□□ 2.49
MBD3-211ENST00000592965 STYK1Q6J9G0 422 aa30.61■■■□□ 2.49
MBD3-211ENST00000592965 NMRK2Q9NPI5 230 aa30.61■■■□□ 2.49
MBD3-211ENST00000592965 NIP7Q9Y221 180 aaKnown RBP eCLIP30.61■■■□□ 2.49
MBD3-211ENST00000592965 TIAM2Q8IVF5 1701 aa30.61■■■□□ 2.49
MBD3-211ENST00000592965 SLX4Q8IY92 1834 aa30.61■■■□□ 2.49
MBD3-211ENST00000592965 SRGNP10124 158 aa30.6■■■□□ 2.49
MBD3-211ENST00000592965 ERBB4Q15303 1308 aa30.6■■■□□ 2.49
MBD3-211ENST00000592965 KDM2BQ8NHM5 1336 aa30.59■■■□□ 2.49
MBD3-211ENST00000592965 NFKBIEO00221 500 aa30.59■■■□□ 2.49
MBD3-211ENST00000592965 HLFQ16534 295 aa30.59■■■□□ 2.49
MBD3-211ENST00000592965 CNKSR1Q969H4 720 aa30.59■■■□□ 2.49
MBD3-211ENST00000592965 ERVV-1B6SEH8 477 aa30.58■■■□□ 2.49
MBD3-211ENST00000592965 PRELPP51888 382 aa30.58■■■□□ 2.49
MBD3-211ENST00000592965 WDR43Q15061 677 aaKnown RBP eCLIP30.58■■■□□ 2.49
MBD3-211ENST00000592965 PRKRIP1Q9H875 184 aaPredicted RBP30.58■■■□□ 2.49
MBD3-211ENST00000592965 DICER1Q9UPY3 1922 aaKnown RBP30.57■■■□□ 2.48
MBD3-211ENST00000592965 MAP3K15Q6ZN16 1313 aa30.57■■■□□ 2.48
MBD3-211ENST00000592965 HSPA6P17066 643 aa30.57■■■□□ 2.48
MBD3-211ENST00000592965 TPTE2Q6XPS3 522 aa30.57■■■□□ 2.48
MBD3-211ENST00000592965 CCDC146Q8IYE0 955 aa30.57■■■□□ 2.48
MBD3-211ENST00000592965 RUNDC1Q96C34 613 aa30.57■■■□□ 2.48
MBD3-211ENST00000592965 MASTLQ96GX5 879 aa30.57■■■□□ 2.48
MBD3-211ENST00000592965 RRP7AQ9Y3A4 280 aaKnown RBP30.57■■■□□ 2.48
MBD3-211ENST00000592965 TOMM70O94826 608 aa30.56■■■□□ 2.48
MBD3-211ENST00000592965 KLRG2A4D1S0 409 aaPredicted RBP30.55■■■□□ 2.48
MBD3-211ENST00000592965 C21orf2O43822 256 aa30.55■■■□□ 2.48
MBD3-211ENST00000592965 KIF6Q6ZMV9 814 aa30.55■■■□□ 2.48
MBD3-211ENST00000592965 NGEFQ8N5V2 710 aa30.55■■■□□ 2.48
MBD3-211ENST00000592965 PRPF40BQ6NWY9 871 aaKnown RBP30.54■■■□□ 2.48
MBD3-211ENST00000592965 TTLL7Q6ZT98 887 aa30.54■■■□□ 2.48
MBD3-211ENST00000592965 MYL6BP14649 208 aa30.53■■■□□ 2.48
MBD3-211ENST00000592965 LTBP3Q9NS15 1303 aa30.52■■■□□ 2.48
MBD3-211ENST00000592965 ADAMTS8Q9UP79 889 aa30.52■■■□□ 2.48
MBD3-211ENST00000592965 NPR1P16066 1061 aa30.51■■■□□ 2.47
MBD3-211ENST00000592965 SOGA3Q5TF21 947 aa30.51■■■□□ 2.47
MBD3-211ENST00000592965 ZNF219Q9P2Y4 722 aaPredicted RBP30.51■■■□□ 2.47
MBD3-211ENST00000592965 IBTKQ9P2D0 1353 aaPredicted RBP30.51■■■□□ 2.47
MBD3-211ENST00000592965 NEUROD2Q15784 382 aa30.5■■■□□ 2.47
MBD3-211ENST00000592965 NYXQ9GZU5 481 aa30.5■■■□□ 2.47
MBD3-211ENST00000592965 TRIM35Q9UPQ4 493 aa30.5■■■□□ 2.47
MBD3-211ENST00000592965 FAM177BA6PVY3 158 aa30.49■■■□□ 2.47
MBD3-211ENST00000592965 LRP10Q7Z4F1 713 aa30.49■■■□□ 2.47
MBD3-211ENST00000592965 RBM46Q8TBY0 533 aaKnown RBP30.49■■■□□ 2.47
MBD3-211ENST00000592965 TAOK3Q9H2K8 898 aa30.48■■■□□ 2.47
MBD3-211ENST00000592965 ZBTB3Q9H5J0 574 aa30.48■■■□□ 2.47
MBD3-211ENST00000592965 RIC1Q4ADV7 1423 aa30.47■■■□□ 2.47
MBD3-211ENST00000592965 ABCC12Q96J65 1359 aa30.47■■■□□ 2.47
MBD3-211ENST00000592965 CHL1O00533 1208 aa30.47■■■□□ 2.47
MBD3-211ENST00000592965 PDIA6Q15084 440 aa30.47■■■□□ 2.47
MBD3-211ENST00000592965 GLTPD2A6NH11 291 aa30.46■■■□□ 2.47
MBD3-211ENST00000592965 EIF2S2P20042 333 aaKnown RBP30.46■■■□□ 2.47
MBD3-211ENST00000592965 GTF2E1P29083 439 aaPredicted RBP30.46■■■□□ 2.47
MBD3-211ENST00000592965 C16orf71Q8IYS4 520 aaPredicted RBP30.46■■■□□ 2.47
MBD3-211ENST00000592965 C7orf43Q8WVR3 580 aa30.46■■■□□ 2.47
MBD3-211ENST00000592965 UBN2Q6ZU65 1347 aa30.46■■■□□ 2.47
MBD3-211ENST00000592965 RRAGCQ9HB90 399 aa30.45■■■□□ 2.47
MBD3-211ENST00000592965 GIGYF2Q6Y7W6 1299 aaKnown RBP30.44■■■□□ 2.46
MBD3-211ENST00000592965 ZNF34Q8IZ26 560 aa30.44■■■□□ 2.46
MBD3-211ENST00000592965 ANKRD36CQ5JPF3 1778 aa30.43■■■□□ 2.46
MBD3-211ENST00000592965 GPTP24298 496 aa30.43■■■□□ 2.46
MBD3-211ENST00000592965 PROSER3Q2NL68 480 aa30.43■■■□□ 2.46
MBD3-211ENST00000592965 CRY2Q49AN0 593 aa30.43■■■□□ 2.46
MBD3-211ENST00000592965 CCDC93Q567U6 631 aa30.42■■■□□ 2.46
MBD3-211ENST00000592965 NUTM1Q86Y26 1132 aa30.42■■■□□ 2.46
MBD3-211ENST00000592965 WDR90Q96KV7 1748 aa30.42■■■□□ 2.46
MBD3-211ENST00000592965 ERFEQ4G0M1 354 aa30.41■■■□□ 2.46
MBD3-211ENST00000592965 ALDH1B1P30837 517 aa30.4■■■□□ 2.46
MBD3-211ENST00000592965 APLP1P51693 650 aa30.4■■■□□ 2.46
MBD3-211ENST00000592965 FSTL1Q12841 308 aa30.4■■■□□ 2.46
MBD3-211ENST00000592965 ANXA1P04083 346 aa30.39■■■□□ 2.46
MBD3-211ENST00000592965 PARP10Q53GL7 1025 aa30.39■■■□□ 2.46
MBD3-211ENST00000592965 SUSD4Q5VX71 490 aa30.39■■■□□ 2.46
MBD3-211ENST00000592965 LAS1LQ9Y4W2 734 aaKnown RBP30.39■■■□□ 2.46
MBD3-211ENST00000592965 NTSR2O95665 410 aa30.38■■■□□ 2.45
MBD3-211ENST00000592965 VEGFAP15692 232 aaPredicted RBP30.38■■■□□ 2.45
MBD3-211ENST00000592965 ZEB1P37275 1124 aaPredicted RBP30.38■■■□□ 2.45
MBD3-211ENST00000592965 KRT24Q2M2I5 525 aa30.38■■■□□ 2.45
MBD3-211ENST00000592965 HOXB7P09629 217 aa30.37■■■□□ 2.45
MBD3-211ENST00000592965 CFAP44Q96MT7 982 aa30.37■■■□□ 2.45
MBD3-211ENST00000592965 DDX21Q9NR30 783 aaKnown RBP eCLIP30.37■■■□□ 2.45
MBD3-211ENST00000592965 DPY19L2Q6NUT2 758 aa30.36■■■□□ 2.45
MBD3-211ENST00000592965 PPP1R42Q7Z4L9 355 aa30.36■■■□□ 2.45
MBD3-211ENST00000592965 NECTIN2Q92692 538 aa30.36■■■□□ 2.45
MBD3-211ENST00000592965 HOXA10P31260 410 aaPredicted RBP30.35■■■□□ 2.45
MBD3-211ENST00000592965 FKBP4Q02790 459 aaKnown RBP eCLIP30.35■■■□□ 2.451e-6■■■□□ 15.1
MBD3-211ENST00000592965 COPS6Q7L5N1 327 aa30.35■■■□□ 2.45
MBD3-211ENST00000592965 RTKN2Q8IZC4 609 aa30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms