RNA–Protein interactions for RNA: ENST00000592905.5

ERCC1-217, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-217ENST00000592905 HDGFL1Q5TGJ6 251 aa19.65■□□□□ 0.74
ERCC1-217ENST00000592905 CCDC24Q8N4L8 307 aa19.65■□□□□ 0.74
ERCC1-217ENST00000592905 ZBTB3Q9H5J0 574 aa19.65■□□□□ 0.74
ERCC1-217ENST00000592905 ERBB4Q15303 1308 aa19.65■□□□□ 0.74
ERCC1-217ENST00000592905 KIAA1551Q9HCM1 1747 aa19.65■□□□□ 0.74
ERCC1-217ENST00000592905 LRP10Q7Z4F1 713 aa19.64■□□□□ 0.73
ERCC1-217ENST00000592905 SETDB2Q96T68 719 aa19.64■□□□□ 0.73
ERCC1-217ENST00000592905 CHPF2Q9P2E5 772 aa19.64■□□□□ 0.73
ERCC1-217ENST00000592905 NRXN2Q9P2S2 1712 aa19.64■□□□□ 0.73
ERCC1-217ENST00000592905 DPEP1P16444 411 aa19.63■□□□□ 0.73
ERCC1-217ENST00000592905 AIMP1Q12904 312 aaKnown RBP19.63■□□□□ 0.73
ERCC1-217ENST00000592905 KIF6Q6ZMV9 814 aa19.63■□□□□ 0.73
ERCC1-217ENST00000592905 WDR63Q8IWG1 891 aa19.63■□□□□ 0.73
ERCC1-217ENST00000592905 TSPYL6Q8N831 410 aa19.63■□□□□ 0.73
ERCC1-217ENST00000592905 ZNF652Q9Y2D9 606 aa19.63■□□□□ 0.73
ERCC1-217ENST00000592905 IL16Q14005 1332 aa19.62■□□□□ 0.73
ERCC1-217ENST00000592905 MAP3K15Q6ZN16 1313 aa19.62■□□□□ 0.73
ERCC1-217ENST00000592905 FAM177BA6PVY3 158 aa19.62■□□□□ 0.73
ERCC1-217ENST00000592905 HOXB7P09629 217 aa19.62■□□□□ 0.73
ERCC1-217ENST00000592905 YBX3P16989 372 aaKnown RBP eCLIP19.62■□□□□ 0.73
ERCC1-217ENST00000592905 CLEC4GQ6UXB4 293 aa19.62■□□□□ 0.73
ERCC1-217ENST00000592905 COPS6Q7L5N1 327 aa19.62■□□□□ 0.73
ERCC1-217ENST00000592905 XAGE3Q8WTP9 111 aa19.62■□□□□ 0.73
ERCC1-217ENST00000592905 SPINK5Q9NQ38 1064 aaPredicted RBP19.62■□□□□ 0.73
ERCC1-217ENST00000592905 DDX21Q9NR30 783 aaKnown RBP eCLIP19.62■□□□□ 0.73
ERCC1-217ENST00000592905 NIP7Q9Y221 180 aaKnown RBP eCLIP19.62■□□□□ 0.73
ERCC1-217ENST00000592905 PXDNLA1KZ92 1463 aa19.61■□□□□ 0.73
ERCC1-217ENST00000592905 TGFB2P61812 414 aa19.61■□□□□ 0.73
ERCC1-217ENST00000592905 CARMIL3Q8ND23 1372 aa19.6■□□□□ 0.73
ERCC1-217ENST00000592905 ERVV-1B6SEH8 477 aa19.6■□□□□ 0.73
ERCC1-217ENST00000592905 CHRNA5P30532 468 aa19.6■□□□□ 0.73
ERCC1-217ENST00000592905 FANCIQ9NVI1 1328 aa19.59■□□□□ 0.73
ERCC1-217ENST00000592905 ANKRD31Q8N7Z5 1873 aa19.59■□□□□ 0.73
ERCC1-217ENST00000592905 GPTP24298 496 aa19.59■□□□□ 0.73
ERCC1-217ENST00000592905 PRR5LQ6MZQ0 368 aa19.59■□□□□ 0.73
ERCC1-217ENST00000592905 DBF4Q9UBU7 674 aaPredicted RBP19.59■□□□□ 0.73
ERCC1-217ENST00000592905 TCERG1O14776 1098 aaKnown RBP19.58■□□□□ 0.72
ERCC1-217ENST00000592905 NPHP1O15259 732 aa19.58■□□□□ 0.72
ERCC1-217ENST00000592905 KCNA3P22001 575 aa19.58■□□□□ 0.72
ERCC1-217ENST00000592905 NBPF5PQ86XG9 351 aaPredicted RBP19.58■□□□□ 0.72
ERCC1-217ENST00000592905 BRCA1P38398 1863 aaKnown RBP19.57■□□□□ 0.72
ERCC1-217ENST00000592905 CNBD1Q8NA66 436 aa19.57■□□□□ 0.72
ERCC1-217ENST00000592905 EXOSC9Q06265 439 aaKnown RBP19.56■□□□□ 0.72
ERCC1-217ENST00000592905 TWISTNBQ3B726 338 aaPredicted RBP19.56■□□□□ 0.72
ERCC1-217ENST00000592905 GIGYF2Q6Y7W6 1299 aaKnown RBP19.56■□□□□ 0.72
ERCC1-217ENST00000592905 PHAXQ9H814 394 aaKnown RBP19.56■□□□□ 0.72
ERCC1-217ENST00000592905 CHD4Q14839 1912 aa19.55■□□□□ 0.72
ERCC1-217ENST00000592905 RGL2O15211 777 aa19.55■□□□□ 0.72
ERCC1-217ENST00000592905 GOLGA2Q08379 1002 aa19.55■□□□□ 0.72
ERCC1-217ENST00000592905 C2CD5Q86YS7 1000 aa19.55■□□□□ 0.72
ERCC1-217ENST00000592905 HYPKQ9NX55 129 aa19.55■□□□□ 0.72
ERCC1-217ENST00000592905 BCS1LQ9Y276 419 aa19.55■□□□□ 0.72
ERCC1-217ENST00000592905 ZNF521Q96K83 1311 aa19.54■□□□□ 0.72
ERCC1-217ENST00000592905 CCDC30Q5VVM6 783 aa19.54■□□□□ 0.72
ERCC1-217ENST00000592905 ZNF34Q8IZ26 560 aa19.54■□□□□ 0.72
ERCC1-217ENST00000592905 ZNF428Q96B54 188 aa19.54■□□□□ 0.72
ERCC1-217ENST00000592905 UBN2Q6ZU65 1347 aa19.53■□□□□ 0.72
ERCC1-217ENST00000592905 ST5P78524 1137 aa19.53■□□□□ 0.72
ERCC1-217ENST00000592905 TPTE2Q6XPS3 522 aa19.53■□□□□ 0.72
ERCC1-217ENST00000592905 BRIP1Q9BX63 1249 aa19.53■□□□□ 0.72
ERCC1-217ENST00000592905 PIM2Q9P1W9 311 aa19.53■□□□□ 0.72
ERCC1-217ENST00000592905 ANKRD36CQ5JPF3 1778 aa19.52■□□□□ 0.72
ERCC1-217ENST00000592905 ATP10DQ9P241 1426 aa19.52■□□□□ 0.72
ERCC1-217ENST00000592905 H0YIN7 160 aa19.52■□□□□ 0.72
ERCC1-217ENST00000592905 GRIN3BO60391 1043 aa19.52■□□□□ 0.72
ERCC1-217ENST00000592905 GTF2E1P29083 439 aaPredicted RBP19.52■□□□□ 0.72
ERCC1-217ENST00000592905 SUSD4Q5VX71 490 aa19.52■□□□□ 0.72
ERCC1-217ENST00000592905 ANKRD13DQ6ZTN6 518 aa19.52■□□□□ 0.72
ERCC1-217ENST00000592905 NUTM1Q86Y26 1132 aa19.52■□□□□ 0.72
ERCC1-217ENST00000592905 MYH16Q9H6N6 1097 aa19.52■□□□□ 0.72
ERCC1-217ENST00000592905 COL11A2P13942 1736 aaPredicted RBP19.51■□□□□ 0.71
ERCC1-217ENST00000592905 DLEC1Q9Y238 1755 aa19.51■□□□□ 0.71
ERCC1-217ENST00000592905 CACNA1SQ13698 1873 aa19.5■□□□□ 0.71
ERCC1-217ENST00000592905 VAMP4O75379 141 aa19.5■□□□□ 0.71
ERCC1-217ENST00000592905 PDE6BP35913 854 aa19.5■□□□□ 0.71
ERCC1-217ENST00000592905 TCIRG1Q13488 830 aa19.5■□□□□ 0.71
ERCC1-217ENST00000592905 ERFEQ4G0M1 354 aa19.5■□□□□ 0.71
ERCC1-217ENST00000592905 DALRD3Q5D0E6 543 aaKnown RBP19.5■□□□□ 0.71
ERCC1-217ENST00000592905 PLBD2Q8NHP8 589 aa19.5■□□□□ 0.71
ERCC1-217ENST00000592905 ZNF622Q969S3 477 aaKnown RBP eCLIP19.5■□□□□ 0.71
ERCC1-217ENST00000592905 ARFGEF2Q9Y6D5 1785 aa19.49■□□□□ 0.71
ERCC1-217ENST00000592905 ARFGEF1Q9Y6D6 1849 aa19.49■□□□□ 0.71
ERCC1-217ENST00000592905 G2E3Q7L622 706 aa19.49■□□□□ 0.71
ERCC1-217ENST00000592905 RIC3Q7Z5B4 369 aa19.49■□□□□ 0.71
ERCC1-217ENST00000592905 CDCA7LQ96GN5 454 aa19.49■□□□□ 0.71
ERCC1-217ENST00000592905 STK31Q9BXU1 1019 aa19.49■□□□□ 0.71
ERCC1-217ENST00000592905 ATP5J2-PTCD1G3V325 749 aa19.48■□□□□ 0.71
ERCC1-217ENST00000592905 SLC4A2P04920 1241 aa19.48■□□□□ 0.71
ERCC1-217ENST00000592905 YY1P25490 414 aa19.48■□□□□ 0.71
ERCC1-217ENST00000592905 HSP90AB3PQ58FF7 597 aa19.48■□□□□ 0.71
ERCC1-217ENST00000592905 CHMP4AQ9BY43 222 aa19.48■□□□□ 0.71
ERCC1-217ENST00000592905 NYXQ9GZU5 481 aa19.48■□□□□ 0.71
ERCC1-217ENST00000592905 ABCC12Q96J65 1359 aa19.47■□□□□ 0.71
ERCC1-217ENST00000592905 CACNA1FO60840 1977 aa19.47■□□□□ 0.71
ERCC1-217ENST00000592905 NTSR2O95665 410 aa19.47■□□□□ 0.71
ERCC1-217ENST00000592905 PPP1R42Q7Z4L9 355 aa19.47■□□□□ 0.71
ERCC1-217ENST00000592905 NLRP10Q86W26 655 aa19.47■□□□□ 0.71
ERCC1-217ENST00000592905 TNRC6CQ9HCJ0 1690 aaKnown RBP19.46■□□□□ 0.71
ERCC1-217ENST00000592905 SLFN5Q08AF3 891 aa19.46■□□□□ 0.71
ERCC1-217ENST00000592905 PARP10Q53GL7 1025 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms