RNA–Protein interactions for RNA: ENST00000592561.5

PSMD8-208, Transcript of proteasome 26S subunit, non-ATPase 8, human

TSL 2

Gene PSMD8, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD8-208	ENST00000592561	DDX21	Q9NR30	783 aa	Known RBP eCLIP	14.06	□□□□□ -0.16
PSMD8-208	ENST00000592561	CHPF2	Q9P2E5	772 aa		14.06	□□□□□ -0.16
PSMD8-208	ENST00000592561	COL15A1	P39059	1388 aa		14.06	□□□□□ -0.16
PSMD8-208	ENST00000592561	PHF14	O94880	888 aa		14.05	□□□□□ -0.16
PSMD8-208	ENST00000592561	MYL6B	P14649	208 aa		14.05	□□□□□ -0.16
PSMD8-208	ENST00000592561	LRP10	Q7Z4F1	713 aa		14.05	□□□□□ -0.16
PSMD8-208	ENST00000592561	STK31	Q9BXU1	1019 aa		14.05	□□□□□ -0.16
PSMD8-208	ENST00000592561		A0A087WZG4	1122 aa		14.04	□□□□□ -0.16
PSMD8-208	ENST00000592561	ZBTB7A	O95365	584 aa		14.04	□□□□□ -0.16
PSMD8-208	ENST00000592561	PROSER3	Q2NL68	480 aa		14.04	□□□□□ -0.16
PSMD8-208	ENST00000592561	SMIM5	Q71RC9	77 aa		14.04	□□□□□ -0.16
PSMD8-208	ENST00000592561	NPM2	Q86SE8	214 aa	Known RBP	14.04	□□□□□ -0.16
PSMD8-208	ENST00000592561	COL23A1	Q86Y22	540 aa	Predicted RBP	14.04	□□□□□ -0.16
PSMD8-208	ENST00000592561	ARHGEF1	Q92888	912 aa	Known RBP	14.04	□□□□□ -0.16
PSMD8-208	ENST00000592561	HYPK	Q9NX55	129 aa		14.04	□□□□□ -0.16
PSMD8-208	ENST00000592561	ANXA1	P04083	346 aa		14.03	□□□□□ -0.16
PSMD8-208	ENST00000592561	RFC4	P35249	363 aa		14.03	□□□□□ -0.16
PSMD8-208	ENST00000592561	PPP4R2	Q9NY27	417 aa		14.03	□□□□□ -0.16
PSMD8-208	ENST00000592561	ZNF330	Q9Y3S2	320 aa	Predicted RBP	14.03	□□□□□ -0.16
PSMD8-208	ENST00000592561	C4A	P0C0L4	1744 aa		14.02	□□□□□ -0.16
PSMD8-208	ENST00000592561	ALDH1L2	Q3SY69	923 aa		14.02	□□□□□ -0.17
PSMD8-208	ENST00000592561	PDGFD	Q9GZP0	370 aa	Predicted RBP	14.02	□□□□□ -0.17
PSMD8-208	ENST00000592561	USP42	Q9H9J4	1324 aa	Known RBP	14.01	□□□□□ -0.17
PSMD8-208	ENST00000592561	TCERG1	O14776	1098 aa	Known RBP	14.01	□□□□□ -0.17
PSMD8-208	ENST00000592561	DZIP3	Q86Y13	1208 aa	Known RBP	14.01	□□□□□ -0.17
PSMD8-208	ENST00000592561	NARF	Q9UHQ1	456 aa		14.01	□□□□□ -0.17
PSMD8-208	ENST00000592561	CASZ1	Q86V15	1759 aa		14.01	□□□□□ -0.17
PSMD8-208	ENST00000592561	RGL2	O15211	777 aa		14	□□□□□ -0.17
PSMD8-208	ENST00000592561	ZPR1	O75312	459 aa		14	□□□□□ -0.17
PSMD8-208	ENST00000592561	KIF6	Q6ZMV9	814 aa		14	□□□□□ -0.17
PSMD8-208	ENST00000592561	COPS6	Q7L5N1	327 aa		14	□□□□□ -0.17
PSMD8-208	ENST00000592561	SLC16A10	Q8TF71	515 aa		14	□□□□□ -0.17
PSMD8-208	ENST00000592561	XAGE3	Q8WTP9	111 aa		14	□□□□□ -0.17
PSMD8-208	ENST00000592561	SSH1	Q8WYL5	1049 aa		14	□□□□□ -0.17
PSMD8-208	ENST00000592561	TBC1D2B	Q9UPU7	963 aa		14	□□□□□ -0.17
PSMD8-208	ENST00000592561	RNF123	Q5XPI4	1314 aa		13.99	□□□□□ -0.17
PSMD8-208	ENST00000592561	MAP3K15	Q6ZN16	1313 aa		13.99	□□□□□ -0.17
PSMD8-208	ENST00000592561	SCN7A	Q01118	1682 aa		13.99	□□□□□ -0.17
PSMD8-208	ENST00000592561	CAMTA2	O94983	1202 aa		13.99	□□□□□ -0.17
PSMD8-208	ENST00000592561	RARS	P54136	660 aa	Known RBP	13.99	□□□□□ -0.17
PSMD8-208	ENST00000592561	TTLL7	Q6ZT98	887 aa		13.99	□□□□□ -0.17
PSMD8-208	ENST00000592561	ARX	Q96QS3	562 aa		13.99	□□□□□ -0.17
PSMD8-208	ENST00000592561	PHAX	Q9H814	394 aa	Known RBP	13.99	□□□□□ -0.17
PSMD8-208	ENST00000592561	RTN4	Q9NQC3	1192 aa	Known RBP	13.99	□□□□□ -0.17
PSMD8-208	ENST00000592561	SRP68	Q9UHB9	627 aa	Known RBP	13.99	□□□□□ -0.17
PSMD8-208	ENST00000592561	CACNA1F	O60840	1977 aa		13.98	□□□□□ -0.17
PSMD8-208	ENST00000592561	ERVV-1	B6SEH8	477 aa		13.98	□□□□□ -0.17
PSMD8-208	ENST00000592561	GYS1	P13807	737 aa		13.98	□□□□□ -0.17
PSMD8-208	ENST00000592561	BRPF1	P55201	1214 aa	Predicted RBP	13.98	□□□□□ -0.17
PSMD8-208	ENST00000592561	AIMP1	Q12904	312 aa	Known RBP	13.98	□□□□□ -0.17
PSMD8-208	ENST00000592561	FLII	Q13045	1269 aa		13.98	□□□□□ -0.17
PSMD8-208	ENST00000592561	USPL1	Q5W0Q7	1092 aa		13.98	□□□□□ -0.17
PSMD8-208	ENST00000592561	G2E3	Q7L622	706 aa		13.98	□□□□□ -0.17
PSMD8-208	ENST00000592561	MRPL50	Q8N5N7	158 aa	Known RBP	13.98	□□□□□ -0.17
PSMD8-208	ENST00000592561	SMC4	Q9NTJ3	1288 aa		13.98	□□□□□ -0.17
PSMD8-208	ENST00000592561	BCOR	Q6W2J9	1755 aa		13.98	□□□□□ -0.17
PSMD8-208	ENST00000592561	DDX58	O95786	925 aa	Known RBP	13.97	□□□□□ -0.17
PSMD8-208	ENST00000592561	CLEC4G	Q6UXB4	293 aa		13.97	□□□□□ -0.17
PSMD8-208	ENST00000592561	PLBD2	Q8NHP8	589 aa		13.97	□□□□□ -0.17
PSMD8-208	ENST00000592561	BCL2L13	Q9BXK5	485 aa		13.97	□□□□□ -0.17
PSMD8-208	ENST00000592561	BCL2L12	Q9HB09	334 aa		13.97	□□□□□ -0.17
PSMD8-208	ENST00000592561	TSHZ2	Q9NRE2	1034 aa		13.97	□□□□□ -0.17
PSMD8-208	ENST00000592561	ZNF652	Q9Y2D9	606 aa		13.97	□□□□□ -0.17
PSMD8-208	ENST00000592561	ANKRD13D	Q6ZTN6	518 aa		13.96	□□□□□ -0.17
PSMD8-208	ENST00000592561	NLGN1	Q8N2Q7	840 aa		13.96	□□□□□ -0.17
PSMD8-208	ENST00000592561	MTFR1L	Q9H019	292 aa		13.96	□□□□□ -0.17
PSMD8-208	ENST00000592561	ZBTB3	Q9H5J0	574 aa		13.96	□□□□□ -0.17
PSMD8-208	ENST00000592561	SSUH2	Q9Y2M2	353 aa		13.96	□□□□□ -0.17
PSMD8-208	ENST00000592561	FKBP5	Q13451	457 aa	Predicted RBP	13.95	□□□□□ -0.18
PSMD8-208	ENST00000592561	HLF	Q16534	295 aa		13.95	□□□□□ -0.18
PSMD8-208	ENST00000592561	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.95	□□□□□ -0.18
PSMD8-208	ENST00000592561	KLHL34	Q8N239	644 aa		13.95	□□□□□ -0.18
PSMD8-208	ENST00000592561	PTPRC	P08575	1304 aa		13.94	□□□□□ -0.18
PSMD8-208	ENST00000592561	KIF16B	Q96L93	1317 aa		13.94	□□□□□ -0.18
PSMD8-208	ENST00000592561	PI4KAP2	A4QPH2	592 aa		13.94	□□□□□ -0.18
PSMD8-208	ENST00000592561	KSR2	Q6VAB6	950 aa		13.94	□□□□□ -0.18
PSMD8-208	ENST00000592561	RIC3	Q7Z5B4	369 aa		13.94	□□□□□ -0.18
PSMD8-208	ENST00000592561	PI4KAP1	Q8N8J0	262 aa		13.94	□□□□□ -0.18
PSMD8-208	ENST00000592561	RCAN3	Q9UKA8	241 aa		13.94	□□□□□ -0.18
PSMD8-208	ENST00000592561	ADCY9	O60503	1353 aa		13.94	□□□□□ -0.18
PSMD8-208	ENST00000592561	COL24A1	Q17RW2	1714 aa		13.93	□□□□□ -0.18
PSMD8-208	ENST00000592561	ATP10D	Q9P241	1426 aa		13.93	□□□□□ -0.18
PSMD8-208	ENST00000592561	BCAR3	O75815	825 aa		13.93	□□□□□ -0.18
PSMD8-208	ENST00000592561	HSP90AB3P	Q58FF7	597 aa		13.93	□□□□□ -0.18
PSMD8-208	ENST00000592561	MSL1	Q68DK7	614 aa		13.93	□□□□□ -0.18
PSMD8-208	ENST00000592561	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.93	□□□□□ -0.18
PSMD8-208	ENST00000592561	ARFGEF2	Q9Y6D5	1785 aa		13.93	□□□□□ -0.18
PSMD8-208	ENST00000592561	TM4SF1	P30408	202 aa		13.92	□□□□□ -0.18
PSMD8-208	ENST00000592561	NFIX	Q14938	502 aa		13.92	□□□□□ -0.18
PSMD8-208	ENST00000592561	TBC1D9B	Q66K14	1250 aa		13.92	□□□□□ -0.18
PSMD8-208	ENST00000592561	NOB1	Q9ULX3	412 aa	Known RBP	13.92	□□□□□ -0.18
PSMD8-208	ENST00000592561	MAP3K2	Q9Y2U5	619 aa		13.92	□□□□□ -0.18
PSMD8-208	ENST00000592561	NUP98	P52948	1817 aa		13.92	□□□□□ -0.18
PSMD8-208	ENST00000592561	PTGER2	P43116	358 aa		13.91	□□□□□ -0.18
PSMD8-208	ENST00000592561	VASP	P50552	380 aa	Predicted RBP	13.91	□□□□□ -0.18
PSMD8-208	ENST00000592561	TCIRG1	Q13488	830 aa		13.91	□□□□□ -0.18
PSMD8-208	ENST00000592561	ZNF34	Q8IZ26	560 aa		13.91	□□□□□ -0.18
PSMD8-208	ENST00000592561	DNAAF4	Q8WXU2	420 aa		13.91	□□□□□ -0.18
PSMD8-208	ENST00000592561	ARHGAP45	Q92619	1136 aa		13.91	□□□□□ -0.18
PSMD8-208	ENST00000592561	SETDB2	Q96T68	719 aa		13.91	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms