RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 CALD1Q05682 793 aaKnown RBP35.52■■■■□ 3.28
SMAD4-213ENST00000591914 HLFQ16534 295 aa35.52■■■■□ 3.28
SMAD4-213ENST00000591914 KRT24Q2M2I5 525 aa35.52■■■■□ 3.28
SMAD4-213ENST00000591914 LRP10Q7Z4F1 713 aa35.52■■■■□ 3.28
SMAD4-213ENST00000591914 ZNF784Q8NCA9 323 aaPredicted RBP35.52■■■■□ 3.28
SMAD4-213ENST00000591914 ERVV-1B6SEH8 477 aa35.51■■■■□ 3.28
SMAD4-213ENST00000591914 MAP3K15Q6ZN16 1313 aa35.51■■■■□ 3.27
SMAD4-213ENST00000591914 DALRD3Q5D0E6 543 aaKnown RBP35.5■■■■□ 3.27
SMAD4-213ENST00000591914 TTLL7Q6ZT98 887 aa35.5■■■■□ 3.27
SMAD4-213ENST00000591914 CNBD1Q8NA66 436 aa35.5■■■■□ 3.27
SMAD4-213ENST00000591914 BRIP1Q9BX63 1249 aa35.5■■■■□ 3.27
SMAD4-213ENST00000591914 MBIPQ9NS73 344 aa35.5■■■■□ 3.27
SMAD4-213ENST00000591914 IFT57Q9NWB7 429 aa35.5■■■■□ 3.27
SMAD4-213ENST00000591914 KIF6Q6ZMV9 814 aa35.49■■■■□ 3.27
SMAD4-213ENST00000591914 NIP7Q9Y221 180 aaKnown RBP eCLIP35.49■■■■□ 3.27
SMAD4-213ENST00000591914 HOXB7P09629 217 aa35.47■■■■□ 3.27
SMAD4-213ENST00000591914 C2CD5Q86YS7 1000 aa35.47■■■■□ 3.27
SMAD4-213ENST00000591914 NUP98P52948 1817 aa35.47■■■■□ 3.27
SMAD4-213ENST00000591914 GNAI1P63096 354 aa35.46■■■■□ 3.27
SMAD4-213ENST00000591914 PROSER3Q2NL68 480 aa35.46■■■■□ 3.27
SMAD4-213ENST00000591914 NBPF5PQ86XG9 351 aaPredicted RBP35.46■■■■□ 3.27
SMAD4-213ENST00000591914 CCDC24Q8N4L8 307 aa35.46■■■■□ 3.27
SMAD4-213ENST00000591914 H0YIN7 160 aa35.45■■■■□ 3.27
SMAD4-213ENST00000591914 PDE6BP35913 854 aa35.45■■■■□ 3.27
SMAD4-213ENST00000591914 CCDC27Q2M243 656 aa35.45■■■■□ 3.27
SMAD4-213ENST00000591914 PDZRN3Q9UPQ7 1066 aa35.45■■■■□ 3.27
SMAD4-213ENST00000591914 ATP10DQ9P241 1426 aa35.45■■■■□ 3.27
SMAD4-213ENST00000591914 ST5P78524 1137 aa35.44■■■■□ 3.26
SMAD4-213ENST00000591914 NECTIN2Q92692 538 aa35.44■■■■□ 3.26
SMAD4-213ENST00000591914 COL11A2P13942 1736 aaPredicted RBP35.43■■■■□ 3.26
SMAD4-213ENST00000591914 NPHP1O15259 732 aa35.43■■■■□ 3.26
SMAD4-213ENST00000591914 ZBTB3Q9H5J0 574 aa35.43■■■■□ 3.26
SMAD4-213ENST00000591914 ADCY9O60503 1353 aa35.42■■■■□ 3.26
SMAD4-213ENST00000591914 ANXA1P04083 346 aa35.42■■■■□ 3.26
SMAD4-213ENST00000591914 NCBP3Q53F19 620 aaKnown RBP35.42■■■■□ 3.26
SMAD4-213ENST00000591914 DDX21Q9NR30 783 aaKnown RBP eCLIP35.42■■■■□ 3.26
SMAD4-213ENST00000591914 TPTE2Q6XPS3 522 aa35.41■■■■□ 3.26
SMAD4-213ENST00000591914 ARHGAP27Q6ZUM4 889 aa35.41■■■■□ 3.26
SMAD4-213ENST00000591914 HDGFL1Q5TGJ6 251 aa35.4■■■■□ 3.26
SMAD4-213ENST00000591914 DUSP27Q5VZP5 1158 aa35.4■■■■□ 3.26
SMAD4-213ENST00000591914 GIGYF2Q6Y7W6 1299 aaKnown RBP35.39■■■■□ 3.26
SMAD4-213ENST00000591914 WWC1Q8IX03 1113 aa35.39■■■■□ 3.26
SMAD4-213ENST00000591914 TTLL6Q8N841 843 aa35.39■■■■□ 3.26
SMAD4-213ENST00000591914 SENP3-EIF4A1A0A087X0R7 540 aa35.37■■■■□ 3.25
SMAD4-213ENST00000591914 CHPF2Q9P2E5 772 aa35.37■■■■□ 3.25
SMAD4-213ENST00000591914 COPS6Q7L5N1 327 aa35.35■■■■□ 3.25
SMAD4-213ENST00000591914 ZNF34Q8IZ26 560 aa35.35■■■■□ 3.25
SMAD4-213ENST00000591914 XAGE3Q8WTP9 111 aa35.35■■■■□ 3.25
SMAD4-213ENST00000591914 UBN2Q6ZU65 1347 aa35.34■■■■□ 3.25
SMAD4-213ENST00000591914 FAM177BA6PVY3 158 aa35.34■■■■□ 3.25
SMAD4-213ENST00000591914 SRGNP10124 158 aa35.34■■■■□ 3.25
SMAD4-213ENST00000591914 DBF4Q9UBU7 674 aaPredicted RBP35.34■■■■□ 3.25
SMAD4-213ENST00000591914 IBTKQ9P2D0 1353 aaPredicted RBP35.34■■■■□ 3.25
SMAD4-213ENST00000591914 GPTP24298 496 aa35.33■■■■□ 3.25
SMAD4-213ENST00000591914 ZNF622Q969S3 477 aaKnown RBP eCLIP35.33■■■■□ 3.25
SMAD4-213ENST00000591914 NYXQ9GZU5 481 aa35.33■■■■□ 3.25
SMAD4-213ENST00000591914 KLRG2A4D1S0 409 aaPredicted RBP35.32■■■■□ 3.24
SMAD4-213ENST00000591914 STYK1Q6J9G0 422 aa35.32■■■■□ 3.24
SMAD4-213ENST00000591914 AIMP1Q12904 312 aaKnown RBP35.31■■■■□ 3.24
SMAD4-213ENST00000591914 IL16Q14005 1332 aa35.31■■■■□ 3.24
SMAD4-213ENST00000591914 FAM9BQ8IZU0 186 aa35.3■■■■□ 3.24
SMAD4-213ENST00000591914 C8orf58Q8NAV2 365 aa35.3■■■■□ 3.24
SMAD4-213ENST00000591914 GTF2E1P29083 439 aaPredicted RBP35.29■■■■□ 3.24
SMAD4-213ENST00000591914 MASTLQ96GX5 879 aa35.29■■■■□ 3.24
SMAD4-213ENST00000591914 ANKRD36CQ5JPF3 1778 aa35.28■■■■□ 3.24
SMAD4-213ENST00000591914 ELL2O00472 640 aaPredicted RBP35.28■■■■□ 3.24
SMAD4-213ENST00000591914 PARP10Q53GL7 1025 aa35.28■■■■□ 3.24
SMAD4-213ENST00000591914 SUSD4Q5VX71 490 aa35.28■■■■□ 3.24
SMAD4-213ENST00000591914 HYPKQ9NX55 129 aa35.28■■■■□ 3.24
SMAD4-213ENST00000591914 ABCC12Q96J65 1359 aa35.27■■■■□ 3.24
SMAD4-213ENST00000591914 NUTM1Q86Y26 1132 aa35.27■■■■□ 3.24
SMAD4-213ENST00000591914 TSR2Q969E8 191 aaKnown RBP35.27■■■■□ 3.24
SMAD4-213ENST00000591914 CNKSR1Q969H4 720 aa35.27■■■■□ 3.24
SMAD4-213ENST00000591914 ARFGEF2Q9Y6D5 1785 aa35.27■■■■□ 3.24
SMAD4-213ENST00000591914 TNRC6CQ9HCJ0 1690 aaKnown RBP35.27■■■■□ 3.24
SMAD4-213ENST00000591914 RIC1Q4ADV7 1423 aa35.26■■■■□ 3.24
SMAD4-213ENST00000591914 NTSR2O95665 410 aa35.25■■■■□ 3.23
SMAD4-213ENST00000591914 ERFEQ4G0M1 354 aa35.25■■■■□ 3.23
SMAD4-213ENST00000591914 HSP90AB3PQ58FF7 597 aa35.25■■■■□ 3.23
SMAD4-213ENST00000591914 NPR1P16066 1061 aa35.24■■■■□ 3.23
SMAD4-213ENST00000591914 PPP1R42Q7Z4L9 355 aa35.24■■■■□ 3.23
SMAD4-213ENST00000591914 SLX4Q8IY92 1834 aa35.24■■■■□ 3.23
SMAD4-213ENST00000591914 SBF1O95248 1867 aa35.24■■■■□ 3.23
SMAD4-213ENST00000591914 C9orf131Q5VYM1 1079 aa35.23■■■■□ 3.23
SMAD4-213ENST00000591914 PLBD2Q8NHP8 589 aa35.23■■■■□ 3.23
SMAD4-213ENST00000591914 CACNA1SQ13698 1873 aa35.22■■■■□ 3.23
SMAD4-213ENST00000591914 TCIRG1Q13488 830 aa35.22■■■■□ 3.23
SMAD4-213ENST00000591914 PRPF40BQ6NWY9 871 aaKnown RBP35.22■■■■□ 3.23
SMAD4-213ENST00000591914 WDR63Q8IWG1 891 aa35.22■■■■□ 3.23
SMAD4-213ENST00000591914 TSPYL6Q8N831 410 aa35.22■■■■□ 3.23
SMAD4-213ENST00000591914 SALL2Q9Y467 1007 aaPredicted RBP35.22■■■■□ 3.23
SMAD4-213ENST00000591914 CRY2Q49AN0 593 aa35.21■■■■□ 3.23
SMAD4-213ENST00000591914 ANKRD13DQ6ZTN6 518 aa35.21■■■■□ 3.23
SMAD4-213ENST00000591914 CHMP4AQ9BY43 222 aa35.21■■■■□ 3.23
SMAD4-213ENST00000591914 C21orf2O43822 256 aa35.2■■■■□ 3.23
SMAD4-213ENST00000591914 RASSF7Q02833 373 aa35.2■■■■□ 3.23
SMAD4-213ENST00000591914 NLRP10Q86W26 655 aa35.19■■■■□ 3.22
SMAD4-213ENST00000591914 UTP14AQ9BVJ6 771 aaKnown RBP35.19■■■■□ 3.22
SMAD4-213ENST00000591914 RNF123Q5XPI4 1314 aa35.18■■■■□ 3.22
SMAD4-213ENST00000591914 NFKBIEO00221 500 aa35.18■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms