RNA–Protein interactions for RNA: ENST00000588580.6

SUGP1-208, Transcript of SURP and G-patch domain containing 1, humanhuman

TSL 2

Gene SUGP1, Length 715 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-208ENST00000588580 SLFN5Q08AF3 891 aa20.53■□□□□ 0.88
SUGP1-208ENST00000588580 KRT24Q2M2I5 525 aa20.53■□□□□ 0.88
SUGP1-208ENST00000588580 TRMT2AQ8IZ69 625 aaKnown RBP20.53■□□□□ 0.88
SUGP1-208ENST00000588580 SBF1O95248 1867 aa20.52■□□□□ 0.88
SUGP1-208ENST00000588580 PRAMEF22A3QJZ6 481 aa20.52■□□□□ 0.88
SUGP1-208ENST00000588580 E9PSI1 815 aa20.52■□□□□ 0.88
SUGP1-208ENST00000588580 CHRNA5P30532 468 aa20.52■□□□□ 0.88
SUGP1-208ENST00000588580 DNAJC10Q8IXB1 793 aa20.51■□□□□ 0.87
SUGP1-208ENST00000588580 SNRPA1P09661 255 aaKnown RBP20.5■□□□□ 0.87
SUGP1-208ENST00000588580 VEGFAP15692 232 aaPredicted RBP20.5■□□□□ 0.87
SUGP1-208ENST00000588580 MYH16Q9H6N6 1097 aa20.5■□□□□ 0.87
SUGP1-208ENST00000588580 TNRC6CQ9HCJ0 1690 aaKnown RBP20.49■□□□□ 0.87
SUGP1-208ENST00000588580 C8orf58Q8NAV2 365 aa20.49■□□□□ 0.87
SUGP1-208ENST00000588580 CNTNAP4Q9C0A0 1308 aa20.49■□□□□ 0.87
SUGP1-208ENST00000588580 GLTPD2A6NH11 291 aa20.48■□□□□ 0.87
SUGP1-208ENST00000588580 SLC34A2O95436 690 aa20.48■□□□□ 0.87
SUGP1-208ENST00000588580 CYP19A1P11511 503 aaPredicted RBP20.48■□□□□ 0.87
SUGP1-208ENST00000588580 RASSF7Q02833 373 aa20.48■□□□□ 0.87
SUGP1-208ENST00000588580 DDR1Q08345 913 aa20.48■□□□□ 0.87
SUGP1-208ENST00000588580 FKBP8Q14318 412 aa20.48■□□□□ 0.87
SUGP1-208ENST00000588580 DUSP27Q5VZP5 1158 aa20.48■□□□□ 0.87
SUGP1-208ENST00000588580 SRP68Q9UHB9 627 aaKnown RBP20.48■□□□□ 0.87
SUGP1-208ENST00000588580 HOXB7P09629 217 aa20.47■□□□□ 0.87
SUGP1-208ENST00000588580 TSPYL6Q8N831 410 aa20.47■□□□□ 0.87
SUGP1-208ENST00000588580 USP16Q9Y5T5 823 aa20.47■□□□□ 0.87
SUGP1-208ENST00000588580 CACNA1FO60840 1977 aa20.46■□□□□ 0.87
SUGP1-208ENST00000588580 EXOSC9Q06265 439 aaKnown RBP20.46■□□□□ 0.87
SUGP1-208ENST00000588580 YTHDC1Q96MU7 727 aaKnown RBP20.46■□□□□ 0.87
SUGP1-208ENST00000588580 CRKLP46109 303 aaKnown RBP20.45■□□□□ 0.86
SUGP1-208ENST00000588580 INTS5Q6P9B9 1019 aaKnown RBP20.45■□□□□ 0.86
SUGP1-208ENST00000588580 TEX13AQ9BXU3 409 aaPredicted RBP20.45■□□□□ 0.86
SUGP1-208ENST00000588580 SOS1Q07889 1333 aaPredicted RBP20.45■□□□□ 0.86
SUGP1-208ENST00000588580 POTECB2RU33 542 aa20.44■□□□□ 0.86
SUGP1-208ENST00000588580 ZC3H4Q9UPT8 1303 aaKnown RBP20.44■□□□□ 0.86
SUGP1-208ENST00000588580 STARD3NLO95772 234 aa20.43■□□□□ 0.86
SUGP1-208ENST00000588580 TM4SF1P30408 202 aa20.43■□□□□ 0.86
SUGP1-208ENST00000588580 BCORQ6W2J9 1755 aa20.42■□□□□ 0.86
SUGP1-208ENST00000588580 POLRMTO00411 1230 aaKnown RBP20.42■□□□□ 0.86
SUGP1-208ENST00000588580 LMNB1P20700 586 aa20.42■□□□□ 0.86
SUGP1-208ENST00000588580 ZBTB1Q9Y2K1 713 aa20.42■□□□□ 0.86
SUGP1-208ENST00000588580 SCN7AQ01118 1682 aa20.42■□□□□ 0.86
SUGP1-208ENST00000588580 ELL2O00472 640 aaPredicted RBP20.41■□□□□ 0.86
SUGP1-208ENST00000588580 A1BGP04217 495 aa20.41■□□□□ 0.86
SUGP1-208ENST00000588580 TWISTNBQ3B726 338 aaPredicted RBP20.41■□□□□ 0.86
SUGP1-208ENST00000588580 USP42Q9H9J4 1324 aaKnown RBP20.41■□□□□ 0.86
SUGP1-208ENST00000588580 NBPF26B4DH59 902 aa20.4■□□□□ 0.86
SUGP1-208ENST00000588580 FOXN1O15353 648 aa20.4■□□□□ 0.86
SUGP1-208ENST00000588580 ERBB4Q15303 1308 aa20.4■□□□□ 0.86
SUGP1-208ENST00000588580 NBPF10Q6P3W6 841 aaKnown RBP20.4■□□□□ 0.86
SUGP1-208ENST00000588580 NBPF15Q8N660 670 aa20.4■□□□□ 0.86
SUGP1-208ENST00000588580 MKRN1Q9UHC7 482 aaKnown RBP20.4■□□□□ 0.86
SUGP1-208ENST00000588580 VAMP4O75379 141 aa20.39■□□□□ 0.85
SUGP1-208ENST00000588580 PDIA6Q15084 440 aa20.39■□□□□ 0.85
SUGP1-208ENST00000588580 HDGFL1Q5TGJ6 251 aa20.39■□□□□ 0.85
SUGP1-208ENST00000588580 LRP10Q7Z4F1 713 aa20.39■□□□□ 0.85
SUGP1-208ENST00000588580 EIF2S2P20042 333 aaKnown RBP20.37■□□□□ 0.85
SUGP1-208ENST00000588580 PIP4K2AP48426 406 aaPredicted RBP20.37■□□□□ 0.85
SUGP1-208ENST00000588580 PROSER3Q2NL68 480 aa20.37■□□□□ 0.85
SUGP1-208ENST00000588580 CREBZFQ9NS37 354 aa20.37■□□□□ 0.85
SUGP1-208ENST00000588580 COL15A1P39059 1388 aa20.36■□□□□ 0.85
SUGP1-208ENST00000588580 IL6STP40189 918 aaPredicted RBP20.36■□□□□ 0.85
SUGP1-208ENST00000588580 EIF5P55010 431 aaKnown RBP20.36■□□□□ 0.85
SUGP1-208ENST00000588580 NECTIN2Q92692 538 aa20.36■□□□□ 0.85
SUGP1-208ENST00000588580 PRDM10Q9NQV6 1147 aa20.36■□□□□ 0.85
SUGP1-208ENST00000588580 CT47B1P0C2W7 299 aaPredicted RBP20.35■□□□□ 0.85
SUGP1-208ENST00000588580 CANXP27824 592 aaKnown RBP20.35■□□□□ 0.85
SUGP1-208ENST00000588580 CHPF2Q9P2E5 772 aa20.35■□□□□ 0.85
SUGP1-208ENST00000588580 CCDC88AQ3V6T2 1871 aa20.35■□□□□ 0.85
SUGP1-208ENST00000588580 NFKBIEO00221 500 aa20.34■□□□□ 0.85
SUGP1-208ENST00000588580 USPL1Q5W0Q7 1092 aa20.34■□□□□ 0.85
SUGP1-208ENST00000588580 DPY19L2Q6NUT2 758 aa20.34■□□□□ 0.85
SUGP1-208ENST00000588580 TTLL6Q8N841 843 aa20.34■□□□□ 0.85
SUGP1-208ENST00000588580 DDX21Q9NR30 783 aaKnown RBP eCLIP20.34■□□□□ 0.85
SUGP1-208ENST00000588580 ARFGEF2Q9Y6D5 1785 aa20.34■□□□□ 0.85
SUGP1-208ENST00000588580 NUP98P52948 1817 aa20.33■□□□□ 0.85
SUGP1-208ENST00000588580 ANXA1P04083 346 aa20.33■□□□□ 0.85
SUGP1-208ENST00000588580 ANKRD36CQ5JPF3 1778 aa20.32■□□□□ 0.84
SUGP1-208ENST00000588580 ZPR1O75312 459 aa20.32■□□□□ 0.84
SUGP1-208ENST00000588580 CCDC30Q5VVM6 783 aa20.32■□□□□ 0.84
SUGP1-208ENST00000588580 CHADLQ6NUI6 762 aa20.32■□□□□ 0.84
SUGP1-208ENST00000588580 DBF4Q9UBU7 674 aaPredicted RBP20.32■□□□□ 0.84
SUGP1-208ENST00000588580 POTEIP0CG38 1075 aa20.31■□□□□ 0.84
SUGP1-208ENST00000588580 POTEJP0CG39 1038 aa20.31■□□□□ 0.84
SUGP1-208ENST00000588580 NFIXQ14938 502 aa20.31■□□□□ 0.84
SUGP1-208ENST00000588580 ZNF428Q96B54 188 aa20.31■□□□□ 0.84
SUGP1-208ENST00000588580 TCERG1O14776 1098 aaKnown RBP20.3■□□□□ 0.84
SUGP1-208ENST00000588580 MYL6BP14649 208 aa20.3■□□□□ 0.84
SUGP1-208ENST00000588580 CTCFP49711 727 aaPredicted RBP20.3■□□□□ 0.84
SUGP1-208ENST00000588580 CHMP4AQ9BY43 222 aa20.3■□□□□ 0.84
SUGP1-208ENST00000588580 C2CD5Q86YS7 1000 aa20.29■□□□□ 0.84
SUGP1-208ENST00000588580 CNTNAP1P78357 1384 aa20.29■□□□□ 0.84
SUGP1-208ENST00000588580 SERPINB2P05120 415 aa20.28■□□□□ 0.84
SUGP1-208ENST00000588580 TTLL7Q6ZT98 887 aa20.28■□□□□ 0.84
SUGP1-208ENST00000588580 SSH1Q8WYL5 1049 aa20.28■□□□□ 0.84
SUGP1-208ENST00000588580 HYPKQ9NX55 129 aa20.28■□□□□ 0.84
SUGP1-208ENST00000588580 AFDNP55196 1824 aaKnown RBP20.27■□□□□ 0.84
SUGP1-208ENST00000588580 RARSP54136 660 aaKnown RBP20.27■□□□□ 0.84
SUGP1-208ENST00000588580 FAM161AQ3B820 660 aa20.27■□□□□ 0.84
SUGP1-208ENST00000588580 ALDH1L2Q3SY69 923 aa20.27■□□□□ 0.84
SUGP1-208ENST00000588580 ERFEQ4G0M1 354 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms