RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 CNBD1Q8NA66 436 aa19.25■□□□□ 0.67
ATG4D-207ENST00000587256 GOLGB1Q14789 3259 aaKnown RBP19.25■□□□□ 0.67
ATG4D-207ENST00000587256 MAP3K15Q6ZN16 1313 aa19.25■□□□□ 0.67
ATG4D-207ENST00000587256 ANXA1P04083 346 aa19.24■□□□□ 0.67
ATG4D-207ENST00000587256 TTLL7Q6ZT98 887 aa19.24■□□□□ 0.67
ATG4D-207ENST00000587256 ZBTB3Q9H5J0 574 aa19.24■□□□□ 0.67
ATG4D-207ENST00000587256 NIP7Q9Y221 180 aaKnown RBP eCLIP19.24■□□□□ 0.67
ATG4D-207ENST00000587256 BCS1LQ9Y276 419 aa19.24■□□□□ 0.67
ATG4D-207ENST00000587256 UTRNP46939 3433 aa19.24■□□□□ 0.67
ATG4D-207ENST00000587256 CHD4Q14839 1912 aa19.23■□□□□ 0.67
ATG4D-207ENST00000587256 CHRNA5P30532 468 aa19.23■□□□□ 0.67
ATG4D-207ENST00000587256 PROSER3Q2NL68 480 aa19.23■□□□□ 0.67
ATG4D-207ENST00000587256 DUSP27Q5VZP5 1158 aa19.23■□□□□ 0.67
ATG4D-207ENST00000587256 PRR5LQ6MZQ0 368 aa19.23■□□□□ 0.67
ATG4D-207ENST00000587256 NBPF5PQ86XG9 351 aaPredicted RBP19.23■□□□□ 0.67
ATG4D-207ENST00000587256 WWC1Q8IX03 1113 aa19.23■□□□□ 0.67
ATG4D-207ENST00000587256 SALL2Q9Y467 1007 aaPredicted RBP19.23■□□□□ 0.67
ATG4D-207ENST00000587256 BRCA1P38398 1863 aaKnown RBP19.22■□□□□ 0.67
ATG4D-207ENST00000587256 ERVV-1B6SEH8 477 aa19.22■□□□□ 0.67
ATG4D-207ENST00000587256 ST5P78524 1137 aa19.22■□□□□ 0.67
ATG4D-207ENST00000587256 PDIA6Q15084 440 aa19.22■□□□□ 0.67
ATG4D-207ENST00000587256 HLFQ16534 295 aa19.22■□□□□ 0.67
ATG4D-207ENST00000587256 NCBP3Q53F19 620 aaKnown RBP19.21■□□□□ 0.67
ATG4D-207ENST00000587256 CCDC24Q8N4L8 307 aa19.21■□□□□ 0.67
ATG4D-207ENST00000587256 PIM2Q9P1W9 311 aa19.21■□□□□ 0.67
ATG4D-207ENST00000587256 ATP10DQ9P241 1426 aa19.21■□□□□ 0.67
ATG4D-207ENST00000587256 CHPF2Q9P2E5 772 aa19.21■□□□□ 0.67
ATG4D-207ENST00000587256 FAM177BA6PVY3 158 aa19.2■□□□□ 0.66
ATG4D-207ENST00000587256 C2CD5Q86YS7 1000 aa19.2■□□□□ 0.66
ATG4D-207ENST00000587256 TSR2Q969E8 191 aaKnown RBP19.2■□□□□ 0.66
ATG4D-207ENST00000587256 DDX21Q9NR30 783 aaKnown RBP eCLIP19.2■□□□□ 0.66
ATG4D-207ENST00000587256 ANKRD31Q8N7Z5 1873 aa19.2■□□□□ 0.66
ATG4D-207ENST00000587256 DLEC1Q9Y238 1755 aa19.19■□□□□ 0.66
ATG4D-207ENST00000587256 NUP98P52948 1817 aa19.19■□□□□ 0.66
ATG4D-207ENST00000587256 ELL2O00472 640 aaPredicted RBP19.19■□□□□ 0.66
ATG4D-207ENST00000587256 KCNA3P22001 575 aa19.19■□□□□ 0.66
ATG4D-207ENST00000587256 AIMP1Q12904 312 aaKnown RBP19.19■□□□□ 0.66
ATG4D-207ENST00000587256 DALRD3Q5D0E6 543 aaKnown RBP19.19■□□□□ 0.66
ATG4D-207ENST00000587256 LRP10Q7Z4F1 713 aa19.19■□□□□ 0.66
ATG4D-207ENST00000587256 XAGE3Q8WTP9 111 aa19.19■□□□□ 0.66
ATG4D-207ENST00000587256 BRIP1Q9BX63 1249 aa19.19■□□□□ 0.66
ATG4D-207ENST00000587256 IL16Q14005 1332 aa19.19■□□□□ 0.66
ATG4D-207ENST00000587256 H0YIN7 160 aa19.18■□□□□ 0.66
ATG4D-207ENST00000587256 PDE6BP35913 854 aa19.18■□□□□ 0.66
ATG4D-207ENST00000587256 DBF4Q9UBU7 674 aaPredicted RBP19.18■□□□□ 0.66
ATG4D-207ENST00000587256 COL11A2P13942 1736 aaPredicted RBP19.17■□□□□ 0.66
ATG4D-207ENST00000587256 GPTP24298 496 aa19.17■□□□□ 0.66
ATG4D-207ENST00000587256 GTF2E1P29083 439 aaPredicted RBP19.17■□□□□ 0.66
ATG4D-207ENST00000587256 TPTE2Q6XPS3 522 aa19.17■□□□□ 0.66
ATG4D-207ENST00000587256 GIGYF2Q6Y7W6 1299 aaKnown RBP19.17■□□□□ 0.66
ATG4D-207ENST00000587256 COPS6Q7L5N1 327 aa19.17■□□□□ 0.66
ATG4D-207ENST00000587256 ARFGEF1Q9Y6D6 1849 aa19.16■□□□□ 0.66
ATG4D-207ENST00000587256 C8orf58Q8NAV2 365 aa19.16■□□□□ 0.66
ATG4D-207ENST00000587256 PDZRN3Q9UPQ7 1066 aa19.16■□□□□ 0.66
ATG4D-207ENST00000587256 CCER2I3L3R5 266 aa19.15■□□□□ 0.66
ATG4D-207ENST00000587256 NYXQ9GZU5 481 aa19.15■□□□□ 0.66
ATG4D-207ENST00000587256 HYPKQ9NX55 129 aa19.15■□□□□ 0.66
ATG4D-207ENST00000587256 UBN2Q6ZU65 1347 aa19.15■□□□□ 0.66
ATG4D-207ENST00000587256 IBTKQ9P2D0 1353 aaPredicted RBP19.15■□□□□ 0.66
ATG4D-207ENST00000587256 WDR63Q8IWG1 891 aa19.14■□□□□ 0.65
ATG4D-207ENST00000587256 CHMP4AQ9BY43 222 aa19.14■□□□□ 0.65
ATG4D-207ENST00000587256 FANCIQ9NVI1 1328 aa19.14■□□□□ 0.65
ATG4D-207ENST00000587256 ANKRD36CQ5JPF3 1778 aa19.14■□□□□ 0.65
ATG4D-207ENST00000587256 HSP90AB3PQ58FF7 597 aa19.13■□□□□ 0.65
ATG4D-207ENST00000587256 ARHGAP27Q6ZUM4 889 aa19.13■□□□□ 0.65
ATG4D-207ENST00000587256 TTLL6Q8N841 843 aa19.13■□□□□ 0.65
ATG4D-207ENST00000587256 ZNF622Q969S3 477 aaKnown RBP eCLIP19.13■□□□□ 0.65
ATG4D-207ENST00000587256 ABCC12Q96J65 1359 aa19.13■□□□□ 0.65
ATG4D-207ENST00000587256 PARP10Q53GL7 1025 aa19.12■□□□□ 0.65
ATG4D-207ENST00000587256 CCDC30Q5VVM6 783 aa19.12■□□□□ 0.65
ATG4D-207ENST00000587256 NUTM1Q86Y26 1132 aa19.12■□□□□ 0.65
ATG4D-207ENST00000587256 ZNF34Q8IZ26 560 aa19.12■□□□□ 0.65
ATG4D-207ENST00000587256 TSPYL6Q8N831 410 aa19.12■□□□□ 0.65
ATG4D-207ENST00000587256 TNRC6CQ9HCJ0 1690 aaKnown RBP19.11■□□□□ 0.65
ATG4D-207ENST00000587256 TWISTNBQ3B726 338 aaPredicted RBP19.11■□□□□ 0.65
ATG4D-207ENST00000587256 DIEXFQ68CQ4 756 aaKnown RBP19.11■□□□□ 0.65
ATG4D-207ENST00000587256 GOLGA2Q08379 1002 aa19.1■□□□□ 0.65
ATG4D-207ENST00000587256 SUSD4Q5VX71 490 aa19.1■□□□□ 0.65
ATG4D-207ENST00000587256 PPP1R42Q7Z4L9 355 aa19.1■□□□□ 0.65
ATG4D-207ENST00000587256 PLBD2Q8NHP8 589 aa19.1■□□□□ 0.65
ATG4D-207ENST00000587256 STK31Q9BXU1 1019 aa19.1■□□□□ 0.65
ATG4D-207ENST00000587256 MYH16Q9H6N6 1097 aa19.1■□□□□ 0.65
ATG4D-207ENST00000587256 NTSR2O95665 410 aa19.09■□□□□ 0.65
ATG4D-207ENST00000587256 SRGNP10124 158 aa19.09■□□□□ 0.65
ATG4D-207ENST00000587256 ERFEQ4G0M1 354 aa19.09■□□□□ 0.65
ATG4D-207ENST00000587256 STYK1Q6J9G0 422 aa19.09■□□□□ 0.65
ATG4D-207ENST00000587256 ANKRD13DQ6ZTN6 518 aa19.09■□□□□ 0.65
ATG4D-207ENST00000587256 ZNF784Q8NCA9 323 aaPredicted RBP19.09■□□□□ 0.65
ATG4D-207ENST00000587256 MASTLQ96GX5 879 aa19.09■□□□□ 0.65
ATG4D-207ENST00000587256 ARFGEF2Q9Y6D5 1785 aa19.09■□□□□ 0.65
ATG4D-207ENST00000587256 RIC1Q4ADV7 1423 aa19.08■□□□□ 0.65
ATG4D-207ENST00000587256 TCIRG1Q13488 830 aa19.08■□□□□ 0.64
ATG4D-207ENST00000587256 CNKSR1Q969H4 720 aa19.08■□□□□ 0.64
ATG4D-207ENST00000587256 UTP14AQ9BVJ6 771 aaKnown RBP19.08■□□□□ 0.64
ATG4D-207ENST00000587256 PHAXQ9H814 394 aaKnown RBP19.08■□□□□ 0.64
ATG4D-207ENST00000587256 CACNA1SQ13698 1873 aa19.07■□□□□ 0.64
ATG4D-207ENST00000587256 NPR1P16066 1061 aa19.07■□□□□ 0.64
ATG4D-207ENST00000587256 ZNF219Q9P2Y4 722 aaPredicted RBP19.07■□□□□ 0.64
ATG4D-207ENST00000587256 ADCY9O60503 1353 aa19.06■□□□□ 0.64
ATG4D-207ENST00000587256 RNF123Q5XPI4 1314 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms