RNA–Protein interactions for RNA: ENST00000587223.1

NPC1-206, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-206ENST00000587223 TSPYL6Q8N831 410 aa8.45□□□□□ -1.06
NPC1-206ENST00000587223 DDX21Q9NR30 783 aaKnown RBP eCLIP8.45□□□□□ -1.06
NPC1-206ENST00000587223 DBF4Q9UBU7 674 aaPredicted RBP8.45□□□□□ -1.06
NPC1-206ENST00000587223 ZNF521Q96K83 1311 aa8.45□□□□□ -1.06
NPC1-206ENST00000587223 FANCIQ9NVI1 1328 aa8.45□□□□□ -1.06
NPC1-206ENST00000587223 E9PSI1 815 aa8.44□□□□□ -1.06
NPC1-206ENST00000587223 CAMTA2O94983 1202 aa8.44□□□□□ -1.06
NPC1-206ENST00000587223 TM4SF1P30408 202 aa8.44□□□□□ -1.06
NPC1-206ENST00000587223 AIMP1Q12904 312 aaKnown RBP8.44□□□□□ -1.06
NPC1-206ENST00000587223 KIF6Q6ZMV9 814 aa8.44□□□□□ -1.06
NPC1-206ENST00000587223 TTLL7Q6ZT98 887 aa8.44□□□□□ -1.06
NPC1-206ENST00000587223 COPS6Q7L5N1 327 aa8.44□□□□□ -1.06
NPC1-206ENST00000587223 FHDC1Q9C0D6 1143 aaPredicted RBP8.44□□□□□ -1.06
NPC1-206ENST00000587223 BCL2L12Q9HB09 334 aa8.44□□□□□ -1.06
NPC1-206ENST00000587223 HYPKQ9NX55 129 aa8.44□□□□□ -1.06
NPC1-206ENST00000587223 CHPF2Q9P2E5 772 aa8.44□□□□□ -1.06
NPC1-206ENST00000587223 ZNF652Q9Y2D9 606 aa8.44□□□□□ -1.06
NPC1-206ENST00000587223 ERVV-1B6SEH8 477 aa8.43□□□□□ -1.06
NPC1-206ENST00000587223 TCERG1O14776 1098 aaKnown RBP8.43□□□□□ -1.06
NPC1-206ENST00000587223 VAMP4O75379 141 aa8.43□□□□□ -1.06
NPC1-206ENST00000587223 SLFN5Q08AF3 891 aa8.43□□□□□ -1.06
NPC1-206ENST00000587223 NFIXQ14938 502 aa8.43□□□□□ -1.06
NPC1-206ENST00000587223 PROSER3Q2NL68 480 aa8.43□□□□□ -1.06
NPC1-206ENST00000587223 TBC1D9BQ66K14 1250 aa8.43□□□□□ -1.06
NPC1-206ENST00000587223 CLEC4GQ6UXB4 293 aa8.43□□□□□ -1.06
NPC1-206ENST00000587223 XAGE3Q8WTP9 111 aa8.43□□□□□ -1.06
NPC1-206ENST00000587223 CDCA7LQ96GN5 454 aa8.43□□□□□ -1.06
NPC1-206ENST00000587223 SETDB2Q96T68 719 aa8.43□□□□□ -1.06
NPC1-206ENST00000587223 SYT17Q9BSW7 474 aa8.43□□□□□ -1.06
NPC1-206ENST00000587223 STK31Q9BXU1 1019 aa8.43□□□□□ -1.06
NPC1-206ENST00000587223 ZBTB3Q9H5J0 574 aa8.43□□□□□ -1.06
NPC1-206ENST00000587223 MAP3K15Q6ZN16 1313 aa8.43□□□□□ -1.06
NPC1-206ENST00000587223 NPHP1O15259 732 aa8.42□□□□□ -1.06
NPC1-206ENST00000587223 CAPN15O75808 1086 aa8.42□□□□□ -1.06
NPC1-206ENST00000587223 SERPINB2P05120 415 aa8.42□□□□□ -1.06
NPC1-206ENST00000587223 DDR1Q08345 913 aa8.42□□□□□ -1.06
NPC1-206ENST00000587223 HLFQ16534 295 aa8.42□□□□□ -1.06
NPC1-206ENST00000587223 LRP10Q7Z4F1 713 aa8.42□□□□□ -1.06
NPC1-206ENST00000587223 NIP7Q9Y221 180 aaKnown RBP eCLIP8.42□□□□□ -1.06
NPC1-206ENST00000587223 CD2APQ9Y5K6 639 aa8.42□□□□□ -1.06
NPC1-206ENST00000587223 LRP5O75197 1615 aa8.42□□□□□ -1.06
NPC1-206ENST00000587223 LAMB4A4D0S4 1761 aa8.42□□□□□ -1.06
NPC1-206ENST00000587223 POLRMTO00411 1230 aaKnown RBP8.41□□□□□ -1.06
NPC1-206ENST00000587223 RGL2O15211 777 aa8.41□□□□□ -1.06
NPC1-206ENST00000587223 POLA2Q14181 598 aa8.41□□□□□ -1.06
NPC1-206ENST00000587223 GIGYF2Q6Y7W6 1299 aaKnown RBP8.41□□□□□ -1.06
NPC1-206ENST00000587223 ANKRD13DQ6ZTN6 518 aa8.41□□□□□ -1.06
NPC1-206ENST00000587223 PHAXQ9H814 394 aaKnown RBP8.41□□□□□ -1.06
NPC1-206ENST00000587223 C4AP0C0L4 1744 aa8.4□□□□□ -1.06
NPC1-206ENST00000587223 FAM177BA6PVY3 158 aa8.4□□□□□ -1.06
NPC1-206ENST00000587223 DDX58O95786 925 aaKnown RBP8.4□□□□□ -1.06
NPC1-206ENST00000587223 GPTP24298 496 aa8.4□□□□□ -1.06
NPC1-206ENST00000587223 GTF2E1P29083 439 aaPredicted RBP8.4□□□□□ -1.06
NPC1-206ENST00000587223 HSP90AB3PQ58FF7 597 aa8.4□□□□□ -1.06
NPC1-206ENST00000587223 TPTE2Q6XPS3 522 aa8.4□□□□□ -1.06
NPC1-206ENST00000587223 RIC3Q7Z5B4 369 aa8.4□□□□□ -1.06
NPC1-206ENST00000587223 NBPF5PQ86XG9 351 aaPredicted RBP8.4□□□□□ -1.06
NPC1-206ENST00000587223 TRMT2AQ8IZ69 625 aaKnown RBP8.4□□□□□ -1.06
NPC1-206ENST00000587223 PLBD2Q8NHP8 589 aa8.4□□□□□ -1.06
NPC1-206ENST00000587223 RNF39Q9H2S5 420 aa8.4□□□□□ -1.06
NPC1-206ENST00000587223 FBXO3Q9UK99 471 aa8.4□□□□□ -1.06
NPC1-206ENST00000587223 COL24A1Q17RW2 1714 aa8.4□□□□□ -1.07
NPC1-206ENST00000587223 TGFB2P61812 414 aa8.39□□□□□ -1.07
NPC1-206ENST00000587223 TCIRG1Q13488 830 aa8.39□□□□□ -1.07
NPC1-206ENST00000587223 CNBD1Q8NA66 436 aa8.39□□□□□ -1.07
NPC1-206ENST00000587223 CARMIL3Q8ND23 1372 aa8.38□□□□□ -1.07
NPC1-206ENST00000587223 A0A0G2JLW4 131 aa8.38□□□□□ -1.07
NPC1-206ENST00000587223 ST5P78524 1137 aa8.38□□□□□ -1.07
NPC1-206ENST00000587223 PARP10Q53GL7 1025 aa8.38□□□□□ -1.07
NPC1-206ENST00000587223 G2E3Q7L622 706 aa8.38□□□□□ -1.07
NPC1-206ENST00000587223 PPP1R42Q7Z4L9 355 aa8.38□□□□□ -1.07
NPC1-206ENST00000587223 ZNF34Q8IZ26 560 aa8.38□□□□□ -1.07
NPC1-206ENST00000587223 PELP1Q8IZL8 1130 aaKnown RBP8.38□□□□□ -1.07
NPC1-206ENST00000587223 CCDC24Q8N4L8 307 aa8.38□□□□□ -1.07
NPC1-206ENST00000587223 NLGN2Q8NFZ4 835 aa8.38□□□□□ -1.07
NPC1-206ENST00000587223 NYXQ9GZU5 481 aa8.38□□□□□ -1.07
NPC1-206ENST00000587223 ZBED9Q6R2W3 1325 aa8.37□□□□□ -1.07
NPC1-206ENST00000587223 PI4KAP2A4QPH2 592 aa8.37□□□□□ -1.07
NPC1-206ENST00000587223 ATP5J2-PTCD1G3V325 749 aa8.37□□□□□ -1.07
NPC1-206ENST00000587223 DPEP1P16444 411 aa8.37□□□□□ -1.07
NPC1-206ENST00000587223 FLIIQ13045 1269 aa8.37□□□□□ -1.07
NPC1-206ENST00000587223 FKBP5Q13451 457 aaPredicted RBP8.37□□□□□ -1.07
NPC1-206ENST00000587223 GPR162Q16538 588 aa8.37□□□□□ -1.07
NPC1-206ENST00000587223 SUSD4Q5VX71 490 aa8.37□□□□□ -1.07
NPC1-206ENST00000587223 PRR5LQ6MZQ0 368 aa8.37□□□□□ -1.07
NPC1-206ENST00000587223 KSR2Q6VAB6 950 aa8.37□□□□□ -1.07
NPC1-206ENST00000587223 PI4KAP1Q8N8J0 262 aa8.37□□□□□ -1.07
NPC1-206ENST00000587223 ZNF428Q96B54 188 aa8.37□□□□□ -1.07
NPC1-206ENST00000587223 UTP14AQ9BVJ6 771 aaKnown RBP8.37□□□□□ -1.07
NPC1-206ENST00000587223 BRIP1Q9BX63 1249 aa8.37□□□□□ -1.07
NPC1-206ENST00000587223 MAP3K2Q9Y2U5 619 aa8.37□□□□□ -1.07
NPC1-206ENST00000587223 NUP98P52948 1817 aa8.37□□□□□ -1.07
NPC1-206ENST00000587223 H0YIN7 160 aa8.36□□□□□ -1.07
NPC1-206ENST00000587223 CT47B1P0C2W7 299 aaPredicted RBP8.36□□□□□ -1.07
NPC1-206ENST00000587223 PDE6BP35913 854 aa8.36□□□□□ -1.07
NPC1-206ENST00000587223 NEXNQ0ZGT2 675 aa8.36□□□□□ -1.07
NPC1-206ENST00000587223 NLRP10Q86W26 655 aa8.36□□□□□ -1.07
NPC1-206ENST00000587223 C2CD5Q86YS7 1000 aa8.36□□□□□ -1.07
NPC1-206ENST00000587223 MYD88Q99836 296 aa8.36□□□□□ -1.07
NPC1-206ENST00000587223 METTL22Q9BUU2 404 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms