RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 GOLGA2P5Q9HBQ8 144 aa8.78□□□□□ -1
ZNF540-204ENST00000586792 NEUROD1Q13562 356 aa8.77□□□□□ -1.01
ZNF540-204ENST00000586792 COL9A3Q14050 684 aaPredicted RBP8.77□□□□□ -1.01
ZNF540-204ENST00000586792 GRIK4Q16099 956 aa8.77□□□□□ -1.01
ZNF540-204ENST00000586792 MAP7D1Q3KQU3 841 aa8.77□□□□□ -1.01
ZNF540-204ENST00000586792 PRM3Q9NNZ6 103 aa8.77□□□□□ -1.01
ZNF540-204ENST00000586792 HYAL3O43820 417 aaPredicted RBP8.76□□□□□ -1.01
ZNF540-204ENST00000586792 ZNF295-AS1Q8N0V1 137 aa8.76□□□□□ -1.01
ZNF540-204ENST00000586792 MICALL1Q8N3F8 863 aa8.76□□□□□ -1.01
ZNF540-204ENST00000586792 SERTAD1Q9UHV2 236 aa8.76□□□□□ -1.01
ZNF540-204ENST00000586792 IQSEC3Q9UPP2 1182 aaPredicted RBP8.76□□□□□ -1.01
ZNF540-204ENST00000586792 NRG1Q02297 640 aaPredicted RBP8.75□□□□□ -1.01
ZNF540-204ENST00000586792 NEUROD4Q9HD90 331 aa8.75□□□□□ -1.01
ZNF540-204ENST00000586792 ADGRE1Q14246 886 aa8.74□□□□□ -1.01
ZNF540-204ENST00000586792 TRAPPC3LQ5T215 181 aa8.74□□□□□ -1.01
ZNF540-204ENST00000586792 EIF4G1Q04637 1599 aaKnown RBP8.73□□□□□ -1.01
ZNF540-204ENST00000586792 ALBP02768 609 aa8.73□□□□□ -1.01
ZNF540-204ENST00000586792 NID1P14543 1247 aa8.73□□□□□ -1.01
ZNF540-204ENST00000586792 TXNRD3Q86VQ6 643 aa8.73□□□□□ -1.01
ZNF540-204ENST00000586792 KRTAP9-9Q9BYP9 154 aa8.73□□□□□ -1.01
ZNF540-204ENST00000586792 KRTAP9-4Q9BYQ2 154 aa8.73□□□□□ -1.01
ZNF540-204ENST00000586792 STARD13Q9Y3M8 1113 aa8.73□□□□□ -1.01
ZNF540-204ENST00000586792 GPC6Q9Y625 555 aaPredicted RBP8.73□□□□□ -1.01
ZNF540-204ENST00000586792 BACH1O14867 736 aa8.72□□□□□ -1.01
ZNF540-204ENST00000586792 ELNP15502 786 aa8.72□□□□□ -1.01
ZNF540-204ENST00000586792 TMEM229AB2RXF0 380 aa8.71□□□□□ -1.02
ZNF540-204ENST00000586792 ADH7P40394 386 aa8.71□□□□□ -1.02
ZNF540-204ENST00000586792 MBTPS1Q14703 1052 aa8.71□□□□□ -1.02
ZNF540-204ENST00000586792 LENG1Q96BZ8 264 aaPredicted RBP8.71□□□□□ -1.02
ZNF540-204ENST00000586792 SNRKQ9NRH2 765 aa8.71□□□□□ -1.02
ZNF540-204ENST00000586792 CC2D2AQ9P2K1 1620 aa8.71□□□□□ -1.02
ZNF540-204ENST00000586792 LILRB5O75023 590 aa8.7□□□□□ -1.02
ZNF540-204ENST00000586792 LRRC69Q6ZNQ3 347 aa8.7□□□□□ -1.02
ZNF540-204ENST00000586792 C8orf86Q6ZUL3 223 aa8.7□□□□□ -1.02
ZNF540-204ENST00000586792 KRTAP19-1Q8IUB9 90 aa8.7□□□□□ -1.02
ZNF540-204ENST00000586792 IL27Q8NEV9 243 aa8.7□□□□□ -1.02
ZNF540-204ENST00000586792 RAC1P63000 192 aa8.69□□□□□ -1.02
ZNF540-204ENST00000586792 PLPP7Q8NBV4 271 aa8.69□□□□□ -1.02
ZNF540-204ENST00000586792 TP53INP1Q96A56 240 aa8.69□□□□□ -1.02
ZNF540-204ENST00000586792 PARP3Q9Y6F1 533 aa8.69□□□□□ -1.02
ZNF540-204ENST00000586792 SELPP16109 830 aa8.68□□□□□ -1.02
ZNF540-204ENST00000586792 TXLNAP40222 546 aa8.68□□□□□ -1.02
ZNF540-204ENST00000586792 C20orf204Q6ZNR8 217 aa8.68□□□□□ -1.02
ZNF540-204ENST00000586792 L3MBTL2Q969R5 705 aa8.68□□□□□ -1.02
ZNF540-204ENST00000586792 SLC30A3Q99726 388 aa8.68□□□□□ -1.02
ZNF540-204ENST00000586792 USP3Q9Y6I4 520 aa8.68□□□□□ -1.02
ZNF540-204ENST00000586792 A0A0A0MRY4 1105 aa8.67□□□□□ -1.02
ZNF540-204ENST00000586792 EML1O00423 815 aa8.67□□□□□ -1.02
ZNF540-204ENST00000586792 SPEM2Q0P670 501 aa8.67□□□□□ -1.02
ZNF540-204ENST00000586792 SFSWAPQ12872 951 aaKnown RBP8.67□□□□□ -1.02
ZNF540-204ENST00000586792 TEAD4Q15561 434 aa8.67□□□□□ -1.02
ZNF540-204ENST00000586792 CECR2Q9BXF3 1484 aa8.66□□□□□ -1.02
ZNF540-204ENST00000586792 NOS2P35228 1153 aa8.66□□□□□ -1.02
ZNF540-204ENST00000586792 SCHIP1Q9P0W5 487 aaPredicted RBP8.66□□□□□ -1.02
ZNF540-204ENST00000586792 TBC1D2BQ9UPU7 963 aa8.66□□□□□ -1.02
ZNF540-204ENST00000586792 RNF112Q9ULX5 631 aa8.65□□□□□ -1.02
ZNF540-204ENST00000586792 KRTAP4-8A0A0G2JLE6 195 aa8.64□□□□□ -1.03
ZNF540-204ENST00000586792 MCTP1Q6DN14 999 aa8.64□□□□□ -1.03
ZNF540-204ENST00000586792 ANKIB1Q9P2G1 1089 aa8.64□□□□□ -1.03
ZNF540-204ENST00000586792 USP21Q9UK80 565 aa8.64□□□□□ -1.03
ZNF540-204ENST00000586792 PAX4O43316 350 aa8.63□□□□□ -1.03
ZNF540-204ENST00000586792 ZDHHC1Q8WTX9 485 aa8.63□□□□□ -1.03
ZNF540-204ENST00000586792 ZNF232Q9UNY5 417 aa8.63□□□□□ -1.03
ZNF540-204ENST00000586792 PCDHGA11Q9Y5H2 935 aa8.63□□□□□ -1.03
ZNF540-204ENST00000586792 TXKP42681 527 aa8.62□□□□□ -1.03
ZNF540-204ENST00000586792 KCNQ4P56696 695 aa8.62□□□□□ -1.03
ZNF540-204ENST00000586792 SEMA3FQ13275 785 aa8.62□□□□□ -1.03
ZNF540-204ENST00000586792 IRF5Q13568 498 aa8.62□□□□□ -1.03
ZNF540-204ENST00000586792 RHPN1Q8TCX5 695 aa8.62□□□□□ -1.03
ZNF540-204ENST00000586792 BRD7Q9NPI1 651 aa8.62□□□□□ -1.03
ZNF540-204ENST00000586792 VAC14Q08AM6 782 aa8.61□□□□□ -1.03
ZNF540-204ENST00000586792 NEUROD2Q15784 382 aa8.61□□□□□ -1.03
ZNF540-204ENST00000586792 WASHC4Q2M389 1173 aa8.61□□□□□ -1.03
ZNF540-204ENST00000586792 C7orf43Q8WVR3 580 aa8.61□□□□□ -1.03
ZNF540-204ENST00000586792 CEP63Q96MT8 703 aa8.61□□□□□ -1.03
ZNF540-204ENST00000586792 SSBP4Q9BWG4 385 aaPredicted RBP8.61□□□□□ -1.03
ZNF540-204ENST00000586792 JPH1Q9HDC5 661 aaPredicted RBP8.61□□□□□ -1.03
ZNF540-204ENST00000586792 KCNH4Q9UQ05 1017 aa8.61□□□□□ -1.03
ZNF540-204ENST00000586792 SERTM1A2A2V5 107 aa8.6□□□□□ -1.03
ZNF540-204ENST00000586792 LZTS3O60299 673 aaPredicted RBP8.6□□□□□ -1.03
ZNF540-204ENST00000586792 SOX11P35716 441 aa8.6□□□□□ -1.03
ZNF540-204ENST00000586792 EML3Q32P44 896 aa8.6□□□□□ -1.03
ZNF540-204ENST00000586792 SHISA2Q6UWI4 295 aa8.6□□□□□ -1.03
ZNF540-204ENST00000586792 RAB44Q7Z6P3 723 aaPredicted RBP8.6□□□□□ -1.03
ZNF540-204ENST00000586792 EFCC1Q9HA90 598 aa8.6□□□□□ -1.03
ZNF540-204ENST00000586792 NOD1Q9Y239 953 aa8.6□□□□□ -1.03
ZNF540-204ENST00000586792 COL17A1Q9UMD9 1497 aaPredicted RBP8.59□□□□□ -1.03
ZNF540-204ENST00000586792 FMR1NBQ8N0W7 255 aaPredicted RBP8.59□□□□□ -1.03
ZNF540-204ENST00000586792 UBE2OQ9C0C9 1292 aaKnown RBP8.59□□□□□ -1.03
ZNF540-204ENST00000586792 C1orf53Q5VUE5 145 aa8.58□□□□□ -1.04
ZNF540-204ENST00000586792 SLC51AQ86UW1 340 aa8.58□□□□□ -1.04
ZNF540-204ENST00000586792 BHMTQ93088 406 aa8.58□□□□□ -1.04
ZNF540-204ENST00000586792 ZNF358Q9NW07 568 aa8.58□□□□□ -1.04
ZNF540-204ENST00000586792 CHMP3Q9Y3E7 222 aa8.58□□□□□ -1.04
ZNF540-204ENST00000586792 YBX3P16989 372 aaKnown RBP eCLIP8.57□□□□□ -1.04
ZNF540-204ENST00000586792 PSME1Q06323 249 aa8.57□□□□□ -1.04
ZNF540-204ENST00000586792 SLC9A9Q8IVB4 645 aa8.57□□□□□ -1.04
ZNF540-204ENST00000586792 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.57□□□□□ -1.04
ZNF540-204ENST00000586792 SLC6A14Q9UN76 642 aa8.57□□□□□ -1.04
ZNF540-204ENST00000586792 SFI1A8K8P3 1242 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms