RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 LAMB4A4D0S4 1761 aa30.06■■■□□ 2.4
LSM7-202ENST00000585395 CAPN15O75808 1086 aa30.06■■■□□ 2.4
LSM7-202ENST00000585395 PRELPP51888 382 aa30.06■■■□□ 2.4
LSM7-202ENST00000585395 PIP4K2AP48426 406 aaPredicted RBP30.05■■■□□ 2.4
LSM7-202ENST00000585395 RRAGCQ9HB90 399 aa30.05■■■□□ 2.4
LSM7-202ENST00000585395 TBC1D2BQ9UPU7 963 aa30.05■■■□□ 2.4
LSM7-202ENST00000585395 SMC1BQ8NDV3 1235 aa30.04■■■□□ 2.4
LSM7-202ENST00000585395 BICDL1Q6ZP65 573 aa30.03■■■□□ 2.4
LSM7-202ENST00000585395 LAS1LQ9Y4W2 734 aaKnown RBP30.03■■■□□ 2.4
LSM7-202ENST00000585395 EIF4A1P60842 406 aaKnown RBP30.02■■■□□ 2.4
LSM7-202ENST00000585395 DDR1Q08345 913 aa30.02■■■□□ 2.4
LSM7-202ENST00000585395 GNAI1P63096 354 aa30.01■■■□□ 2.39
LSM7-202ENST00000585395 DZIP3Q86Y13 1208 aaKnown RBP30.01■■■□□ 2.39
LSM7-202ENST00000585395 SCN7AQ01118 1682 aa30.01■■■□□ 2.39
LSM7-202ENST00000585395 POLRMTO00411 1230 aaKnown RBP30■■■□□ 2.39
LSM7-202ENST00000585395 NFIXQ14938 502 aa30■■■□□ 2.39
LSM7-202ENST00000585395 CFAP44Q96MT7 982 aa30■■■□□ 2.39
LSM7-202ENST00000585395 SBF1O95248 1867 aa29.99■■■□□ 2.39
LSM7-202ENST00000585395 ZC3H4Q9UPT8 1303 aaKnown RBP29.99■■■□□ 2.39
LSM7-202ENST00000585395 TM4SF1P30408 202 aa29.99■■■□□ 2.39
LSM7-202ENST00000585395 WWC1Q8IX03 1113 aa29.99■■■□□ 2.39
LSM7-202ENST00000585395 IFT57Q9NWB7 429 aa29.99■■■□□ 2.39
LSM7-202ENST00000585395 BCL2L12Q9HB09 334 aa29.98■■■□□ 2.39
LSM7-202ENST00000585395 CHL1O00533 1208 aa29.97■■■□□ 2.39
LSM7-202ENST00000585395 NPHP1O15259 732 aa29.97■■■□□ 2.39
LSM7-202ENST00000585395 IL16Q14005 1332 aa29.96■■■□□ 2.39
LSM7-202ENST00000585395 WDR63Q8IWG1 891 aa29.96■■■□□ 2.39
LSM7-202ENST00000585395 SALL2Q9Y467 1007 aaPredicted RBP29.96■■■□□ 2.39
LSM7-202ENST00000585395 AFDNP55196 1824 aaKnown RBP29.96■■■□□ 2.39
LSM7-202ENST00000585395 SERPINB2P05120 415 aa29.95■■■□□ 2.39
LSM7-202ENST00000585395 ZNF652Q9Y2D9 606 aa29.95■■■□□ 2.39
LSM7-202ENST00000585395 BCORQ6W2J9 1755 aa29.95■■■□□ 2.38
LSM7-202ENST00000585395 CHRNA5P30532 468 aa29.94■■■□□ 2.38
LSM7-202ENST00000585395 TBC1D9BQ66K14 1250 aa29.94■■■□□ 2.38
LSM7-202ENST00000585395 CAMTA2O94983 1202 aa29.93■■■□□ 2.38
LSM7-202ENST00000585395 NBPF26B4DH59 902 aa29.92■■■□□ 2.38
LSM7-202ENST00000585395 NBPF10Q6P3W6 841 aaKnown RBP29.92■■■□□ 2.38
LSM7-202ENST00000585395 NBPF15Q8N660 670 aa29.92■■■□□ 2.38
LSM7-202ENST00000585395 MYL6BP14649 208 aa29.91■■■□□ 2.38
LSM7-202ENST00000585395 EIF2S2P20042 333 aaKnown RBP29.91■■■□□ 2.38
LSM7-202ENST00000585395 SETDB2Q96T68 719 aa29.91■■■□□ 2.38
LSM7-202ENST00000585395 CARMIL3Q8ND23 1372 aa29.9■■■□□ 2.38
LSM7-202ENST00000585395 ZNF853P0CG23 659 aa29.9■■■□□ 2.38
LSM7-202ENST00000585395 VEGFAP15692 232 aaPredicted RBP29.9■■■□□ 2.38
LSM7-202ENST00000585395 HSPA1AP0DMV8 641 aaKnown RBP29.89■■■□□ 2.38
LSM7-202ENST00000585395 HSPA1BP0DMV9 641 aaKnown RBP29.89■■■□□ 2.38
LSM7-202ENST00000585395 KIF6Q6ZMV9 814 aa29.89■■■□□ 2.38
LSM7-202ENST00000585395 GLTPD2A6NH11 291 aa29.88■■■□□ 2.37
LSM7-202ENST00000585395 LMNB1P20700 586 aa29.88■■■□□ 2.37
LSM7-202ENST00000585395 CHMP4AQ9BY43 222 aa29.88■■■□□ 2.37
LSM7-202ENST00000585395 MBIPQ9NS73 344 aa29.88■■■□□ 2.37
LSM7-202ENST00000585395 NRXN2Q9P2S2 1712 aa29.87■■■□□ 2.37
LSM7-202ENST00000585395 CLEC4GQ6UXB4 293 aa29.86■■■□□ 2.37
LSM7-202ENST00000585395 ERBB4Q15303 1308 aa29.86■■■□□ 2.37
LSM7-202ENST00000585395 RASSF7Q02833 373 aa29.85■■■□□ 2.37
LSM7-202ENST00000585395 NECTIN2Q92692 538 aa29.85■■■□□ 2.37
LSM7-202ENST00000585395 MYH16Q9H6N6 1097 aa29.85■■■□□ 2.37
LSM7-202ENST00000585395 HOXB7P09629 217 aa29.84■■■□□ 2.37
LSM7-202ENST00000585395 CNBD1Q8NA66 436 aa29.84■■■□□ 2.37
LSM7-202ENST00000585395 ST5P78524 1137 aa29.83■■■□□ 2.37
LSM7-202ENST00000585395 NBPF5PQ86XG9 351 aaPredicted RBP29.82■■■□□ 2.36
LSM7-202ENST00000585395 NIP7Q9Y221 180 aaKnown RBP eCLIP29.82■■■□□ 2.36
LSM7-202ENST00000585395 H0YIN7 160 aa29.8■■■□□ 2.36
LSM7-202ENST00000585395 GOLGA2Q08379 1002 aa29.8■■■□□ 2.36
LSM7-202ENST00000585395 PRR5LQ6MZQ0 368 aa29.8■■■□□ 2.36
LSM7-202ENST00000585395 C2CD5Q86YS7 1000 aa29.8■■■□□ 2.36
LSM7-202ENST00000585395 CCDC24Q8N4L8 307 aa29.8■■■□□ 2.36
LSM7-202ENST00000585395 MAP3K15Q6ZN16 1313 aa29.79■■■□□ 2.36
LSM7-202ENST00000585395 ZNF521Q96K83 1311 aa29.79■■■□□ 2.36
LSM7-202ENST00000585395 RGL2O15211 777 aa29.79■■■□□ 2.36
LSM7-202ENST00000585395 PDE6BP35913 854 aa29.79■■■□□ 2.36
LSM7-202ENST00000585395 KRT24Q2M2I5 525 aa29.79■■■□□ 2.36
LSM7-202ENST00000585395 ZBTB3Q9H5J0 574 aa29.79■■■□□ 2.36
LSM7-202ENST00000585395 FAM177BA6PVY3 158 aa29.78■■■□□ 2.36
LSM7-202ENST00000585395 TTLL7Q6ZT98 887 aa29.78■■■□□ 2.36
LSM7-202ENST00000585395 DLEC1Q9Y238 1755 aa29.77■■■□□ 2.36
LSM7-202ENST00000585395 ERVV-1B6SEH8 477 aa29.77■■■□□ 2.36
LSM7-202ENST00000585395 GTF2E1P29083 439 aaPredicted RBP29.77■■■□□ 2.36
LSM7-202ENST00000585395 HLFQ16534 295 aa29.77■■■□□ 2.36
LSM7-202ENST00000585395 HDGFL1Q5TGJ6 251 aa29.77■■■□□ 2.36
LSM7-202ENST00000585395 TTLL6Q8N841 843 aa29.77■■■□□ 2.36
LSM7-202ENST00000585395 NUP98P52948 1817 aa29.77■■■□□ 2.36
LSM7-202ENST00000585395 TIAM2Q8IVF5 1701 aa29.76■■■□□ 2.36
LSM7-202ENST00000585395 E9PSI1 815 aa29.76■■■□□ 2.35
LSM7-202ENST00000585395 ANXA1P04083 346 aa29.76■■■□□ 2.35
LSM7-202ENST00000585395 HNRNPUQ00839 825 aaKnown RBP eCLIP29.76■■■□□ 2.35
LSM7-202ENST00000585395 DUSP27Q5VZP5 1158 aa29.76■■■□□ 2.35
LSM7-202ENST00000585395 BRIP1Q9BX63 1249 aa29.76■■■□□ 2.35
LSM7-202ENST00000585395 TSR2Q969E8 191 aaKnown RBP29.75■■■□□ 2.35
LSM7-202ENST00000585395 PDZRN3Q9UPQ7 1066 aa29.75■■■□□ 2.35
LSM7-202ENST00000585395 FANCIQ9NVI1 1328 aa29.74■■■□□ 2.35
LSM7-202ENST00000585395 ANKRD31Q8N7Z5 1873 aa29.74■■■□□ 2.35
LSM7-202ENST00000585395 TPTE2Q6XPS3 522 aa29.74■■■□□ 2.35
LSM7-202ENST00000585395 ZNF622Q969S3 477 aaKnown RBP eCLIP29.74■■■□□ 2.35
LSM7-202ENST00000585395 AIMP1Q12904 312 aaKnown RBP29.73■■■□□ 2.35
LSM7-202ENST00000585395 DPY19L2Q6NUT2 758 aa29.73■■■□□ 2.35
LSM7-202ENST00000585395 CCDC88AQ3V6T2 1871 aa29.72■■■□□ 2.35
LSM7-202ENST00000585395 PROSER3Q2NL68 480 aa29.72■■■□□ 2.35
LSM7-202ENST00000585395 POTECB2RU33 542 aa29.71■■■□□ 2.35
LSM7-202ENST00000585395 GPTP24298 496 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms