RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 DDX21Q9NR30 783 aaKnown RBP eCLIP21.1■□□□□ 0.97
ERBB2-222ENST00000584908 CHD4Q14839 1912 aa21.1■□□□□ 0.97
ERBB2-222ENST00000584908 ANKRD31Q8N7Z5 1873 aa21.1■□□□□ 0.97
ERBB2-222ENST00000584908 SENP3-EIF4A1A0A087X0R7 540 aa21.09■□□□□ 0.97
ERBB2-222ENST00000584908 PROSER3Q2NL68 480 aa21.09■□□□□ 0.97
ERBB2-222ENST00000584908 TTLL7Q6ZT98 887 aa21.09■□□□□ 0.97
ERBB2-222ENST00000584908 SETDB2Q96T68 719 aa21.09■□□□□ 0.97
ERBB2-222ENST00000584908 DLEC1Q9Y238 1755 aa21.09■□□□□ 0.97
ERBB2-222ENST00000584908 ATP10DQ9P241 1426 aa21.09■□□□□ 0.97
ERBB2-222ENST00000584908 HLFQ16534 295 aa21.08■□□□□ 0.97
ERBB2-222ENST00000584908 HDGFL1Q5TGJ6 251 aa21.08■□□□□ 0.97
ERBB2-222ENST00000584908 BICDL1Q6ZP65 573 aa21.08■□□□□ 0.97
ERBB2-222ENST00000584908 GPR162Q16538 588 aa21.07■□□□□ 0.96
ERBB2-222ENST00000584908 KIF6Q6ZMV9 814 aa21.07■□□□□ 0.96
ERBB2-222ENST00000584908 C8orf58Q8NAV2 365 aa21.07■□□□□ 0.96
ERBB2-222ENST00000584908 ZNF521Q96K83 1311 aa21.07■□□□□ 0.96
ERBB2-222ENST00000584908 YBX3P16989 372 aaKnown RBP eCLIP21.06■□□□□ 0.96
ERBB2-222ENST00000584908 KCNA3P22001 575 aa21.06■□□□□ 0.96
ERBB2-222ENST00000584908 TSR2Q969E8 191 aaKnown RBP21.06■□□□□ 0.96
ERBB2-222ENST00000584908 DBF4Q9UBU7 674 aaPredicted RBP21.06■□□□□ 0.96
ERBB2-222ENST00000584908 ARFGEF1Q9Y6D6 1849 aa21.06■□□□□ 0.96
ERBB2-222ENST00000584908 ANXA1P04083 346 aa21.05■□□□□ 0.96
ERBB2-222ENST00000584908 DPEP1P16444 411 aa21.05■□□□□ 0.96
ERBB2-222ENST00000584908 PRR5LQ6MZQ0 368 aa21.05■□□□□ 0.96
ERBB2-222ENST00000584908 NECTIN2Q92692 538 aa21.05■□□□□ 0.96
ERBB2-222ENST00000584908 CHMP4AQ9BY43 222 aa21.05■□□□□ 0.96
ERBB2-222ENST00000584908 CHPF2Q9P2E5 772 aa21.05■□□□□ 0.96
ERBB2-222ENST00000584908 ANKRD36CQ5JPF3 1778 aa21.05■□□□□ 0.96
ERBB2-222ENST00000584908 A0A0G2JLW4 131 aa21.04■□□□□ 0.96
ERBB2-222ENST00000584908 GIGYF2Q6Y7W6 1299 aaKnown RBP21.04■□□□□ 0.96
ERBB2-222ENST00000584908 SALL2Q9Y467 1007 aaPredicted RBP21.04■□□□□ 0.96
ERBB2-222ENST00000584908 GRIN3BO60391 1043 aa21.04■□□□□ 0.96
ERBB2-222ENST00000584908 COPS6Q7L5N1 327 aa21.04■□□□□ 0.96
ERBB2-222ENST00000584908 NIP7Q9Y221 180 aaKnown RBP eCLIP21.04■□□□□ 0.964e-6■□□□□ 10.9
ERBB2-222ENST00000584908 FANCIQ9NVI1 1328 aa21.03■□□□□ 0.96
ERBB2-222ENST00000584908 TSPYL6Q8N831 410 aa21.03■□□□□ 0.96
ERBB2-222ENST00000584908 CNBD1Q8NA66 436 aa21.03■□□□□ 0.96
ERBB2-222ENST00000584908 XAGE3Q8WTP9 111 aa21.03■□□□□ 0.96
ERBB2-222ENST00000584908 BRIP1Q9BX63 1249 aa21.03■□□□□ 0.96
ERBB2-222ENST00000584908 ZBTB3Q9H5J0 574 aa21.03■□□□□ 0.96
ERBB2-222ENST00000584908 HYPKQ9NX55 129 aa21.03■□□□□ 0.96
ERBB2-222ENST00000584908 IBTKQ9P2D0 1353 aaPredicted RBP21.02■□□□□ 0.96
ERBB2-222ENST00000584908 CACNA1FO60840 1977 aa21.02■□□□□ 0.96
ERBB2-222ENST00000584908 ELL2O00472 640 aaPredicted RBP21.02■□□□□ 0.95
ERBB2-222ENST00000584908 ZNF34Q8IZ26 560 aa21.02■□□□□ 0.95
ERBB2-222ENST00000584908 PDZRN3Q9UPQ7 1066 aa21.02■□□□□ 0.95
ERBB2-222ENST00000584908 COL11A2P13942 1736 aaPredicted RBP21.01■□□□□ 0.95
ERBB2-222ENST00000584908 NBPF5PQ86XG9 351 aaPredicted RBP21.01■□□□□ 0.95
ERBB2-222ENST00000584908 PELP1Q8IZL8 1130 aaKnown RBP21.01■□□□□ 0.95
ERBB2-222ENST00000584908 MIER1Q8N108 512 aa21.01■□□□□ 0.95
ERBB2-222ENST00000584908 SPINK5Q9NQ38 1064 aaPredicted RBP21.01■□□□□ 0.95
ERBB2-222ENST00000584908 CCDC30Q5VVM6 783 aa21■□□□□ 0.95
ERBB2-222ENST00000584908 TPTE2Q6XPS3 522 aa21■□□□□ 0.95
ERBB2-222ENST00000584908 PIM2Q9P1W9 311 aa21■□□□□ 0.95
ERBB2-222ENST00000584908 ARFGEF2Q9Y6D5 1785 aa20.99■□□□□ 0.95
ERBB2-222ENST00000584908 UBN2Q6ZU65 1347 aa20.99■□□□□ 0.95
ERBB2-222ENST00000584908 CHRNA5P30532 468 aa20.99■□□□□ 0.95
ERBB2-222ENST00000584908 PDE6BP35913 854 aa20.99■□□□□ 0.95
ERBB2-222ENST00000584908 ST5P78524 1137 aa20.99■□□□□ 0.95
ERBB2-222ENST00000584908 TWISTNBQ3B726 338 aaPredicted RBP20.99■□□□□ 0.95
ERBB2-222ENST00000584908 KLRG2A4D1S0 409 aaPredicted RBP20.98■□□□□ 0.95
ERBB2-222ENST00000584908 AIMP1Q12904 312 aaKnown RBP20.98■□□□□ 0.95
ERBB2-222ENST00000584908 PLBD2Q8NHP8 589 aa20.98■□□□□ 0.95
ERBB2-222ENST00000584908 MYH16Q9H6N6 1097 aa20.98■□□□□ 0.95
ERBB2-222ENST00000584908 RIC1Q4ADV7 1423 aa20.97■□□□□ 0.95
ERBB2-222ENST00000584908 GOLGA2Q08379 1002 aa20.97■□□□□ 0.95
ERBB2-222ENST00000584908 PARP10Q53GL7 1025 aa20.97■□□□□ 0.95
ERBB2-222ENST00000584908 HSP90AB3PQ58FF7 597 aa20.97■□□□□ 0.95
ERBB2-222ENST00000584908 ANKRD13DQ6ZTN6 518 aa20.97■□□□□ 0.95
ERBB2-222ENST00000584908 NYXQ9GZU5 481 aa20.97■□□□□ 0.95
ERBB2-222ENST00000584908 H0YIN7 160 aa20.96■□□□□ 0.95
ERBB2-222ENST00000584908 TCIRG1Q13488 830 aa20.96■□□□□ 0.95
ERBB2-222ENST00000584908 C2CD5Q86YS7 1000 aa20.96■□□□□ 0.95
ERBB2-222ENST00000584908 NPHP1O15259 732 aa20.95■□□□□ 0.94
ERBB2-222ENST00000584908 GPTP24298 496 aa20.95■□□□□ 0.94
ERBB2-222ENST00000584908 DALRD3Q5D0E6 543 aaKnown RBP20.95■□□□□ 0.94
ERBB2-222ENST00000584908 CCDC24Q8N4L8 307 aa20.95■□□□□ 0.94
ERBB2-222ENST00000584908 WWC3Q9ULE0 1092 aa20.95■□□□□ 0.94
ERBB2-222ENST00000584908 BCS1LQ9Y276 419 aa20.95■□□□□ 0.94
ERBB2-222ENST00000584908 TNRC6CQ9HCJ0 1690 aaKnown RBP20.94■□□□□ 0.94
ERBB2-222ENST00000584908 VAMP4O75379 141 aa20.94■□□□□ 0.94
ERBB2-222ENST00000584908 NTSR2O95665 410 aa20.94■□□□□ 0.94
ERBB2-222ENST00000584908 EXOSC9Q06265 439 aaKnown RBP20.94■□□□□ 0.94
ERBB2-222ENST00000584908 SUSD4Q5VX71 490 aa20.94■□□□□ 0.94
ERBB2-222ENST00000584908 PHAXQ9H814 394 aaKnown RBP20.94■□□□□ 0.94
ERBB2-222ENST00000584908 RNF123Q5XPI4 1314 aa20.94■□□□□ 0.94
ERBB2-222ENST00000584908 SRGNP10124 158 aa20.93■□□□□ 0.94
ERBB2-222ENST00000584908 PPP1R42Q7Z4L9 355 aa20.93■□□□□ 0.94
ERBB2-222ENST00000584908 YY1P25490 414 aa20.92■□□□□ 0.94
ERBB2-222ENST00000584908 TTLL6Q8N841 843 aa20.92■□□□□ 0.94
ERBB2-222ENST00000584908 STK31Q9BXU1 1019 aa20.92■□□□□ 0.94
ERBB2-222ENST00000584908 ABCC12Q96J65 1359 aa20.92■□□□□ 0.94
ERBB2-222ENST00000584908 FAM177BA6PVY3 158 aa20.91■□□□□ 0.94
ERBB2-222ENST00000584908 TRIM28Q13263 835 aaKnown RBP20.91■□□□□ 0.94
ERBB2-222ENST00000584908 STYK1Q6J9G0 422 aa20.91■□□□□ 0.94
ERBB2-222ENST00000584908 NLRP10Q86W26 655 aa20.91■□□□□ 0.94
ERBB2-222ENST00000584908 ISCA1Q9BUE6 129 aa20.91■□□□□ 0.94
ERBB2-222ENST00000584908 E9PSI1 815 aa20.9■□□□□ 0.94
ERBB2-222ENST00000584908 GTF2E1P29083 439 aaPredicted RBP20.9■□□□□ 0.94
ERBB2-222ENST00000584908 CRY2Q49AN0 593 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms