RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 TTLL6Q8N841 843 aa28.1■■■□□ 2.09
PPP4R1-228ENST00000584074 NIP7Q9Y221 180 aaKnown RBP eCLIP28.1■■■□□ 2.09
PPP4R1-228ENST00000584074 ARFGEF1Q9Y6D6 1849 aa28.1■■■□□ 2.09
PPP4R1-228ENST00000584074 CHL1O00533 1208 aa28.09■■■□□ 2.09
PPP4R1-228ENST00000584074 CCDC184Q52MB2 194 aa28.09■■■□□ 2.09
PPP4R1-228ENST00000584074 TTLL7Q6ZT98 887 aa28.09■■■□□ 2.09
PPP4R1-228ENST00000584074 NBPF5PQ86XG9 351 aaPredicted RBP28.09■■■□□ 2.09
PPP4R1-228ENST00000584074 GPBP1L1Q9HC44 474 aaPredicted RBP28.09■■■□□ 2.09
PPP4R1-228ENST00000584074 LAS1LQ9Y4W2 734 aaKnown RBP28.09■■■□□ 2.09
PPP4R1-228ENST00000584074 EIF2S2P20042 333 aaKnown RBP28.08■■■□□ 2.09
PPP4R1-228ENST00000584074 ST5P78524 1137 aa28.08■■■□□ 2.09
PPP4R1-228ENST00000584074 ANKRD31Q8N7Z5 1873 aa28.07■■■□□ 2.08
PPP4R1-228ENST00000584074 APAF1O14727 1248 aa28.07■■■□□ 2.08
PPP4R1-228ENST00000584074 C1QTNF8P60827 252 aa28.06■■■□□ 2.08
PPP4R1-228ENST00000584074 C9orf131Q5VYM1 1079 aa28.06■■■□□ 2.08
PPP4R1-228ENST00000584074 ZNF622Q969S3 477 aaKnown RBP eCLIP28.06■■■□□ 2.083e-8■□□□□ 10.5
PPP4R1-228ENST00000584074 PDZRN3Q9UPQ7 1066 aa28.06■■■□□ 2.08
PPP4R1-228ENST00000584074 ERBB4Q15303 1308 aa28.06■■■□□ 2.08
PPP4R1-228ENST00000584074 FAM177BA6PVY3 158 aa28.05■■■□□ 2.08
PPP4R1-228ENST00000584074 ERVV-1B6SEH8 477 aa28.05■■■□□ 2.08
PPP4R1-228ENST00000584074 KRT24Q2M2I5 525 aa28.05■■■□□ 2.08
PPP4R1-228ENST00000584074 KIF6Q6ZMV9 814 aa28.05■■■□□ 2.08
PPP4R1-228ENST00000584074 MAP3K15Q6ZN16 1313 aa28.05■■■□□ 2.08
PPP4R1-228ENST00000584074 DLEC1Q9Y238 1755 aa28.05■■■□□ 2.08
PPP4R1-228ENST00000584074 PDIA6Q15084 440 aa28.04■■■□□ 2.08
PPP4R1-228ENST00000584074 ZBTB3Q9H5J0 574 aa28.04■■■□□ 2.08
PPP4R1-228ENST00000584074 PROSER3Q2NL68 480 aa28.03■■■□□ 2.08
PPP4R1-228ENST00000584074 TPTE2Q6XPS3 522 aa28.03■■■□□ 2.08
PPP4R1-228ENST00000584074 LRP10Q7Z4F1 713 aa28.03■■■□□ 2.08
PPP4R1-228ENST00000584074 NECTIN2Q92692 538 aa28.03■■■□□ 2.08
PPP4R1-228ENST00000584074 ANXA1P04083 346 aa28.02■■■□□ 2.08
PPP4R1-228ENST00000584074 COL11A2P13942 1736 aaPredicted RBP28.01■■■□□ 2.07
PPP4R1-228ENST00000584074 SRGNP10124 158 aa28.01■■■□□ 2.07
PPP4R1-228ENST00000584074 RASSF7Q02833 373 aa28.01■■■□□ 2.07
PPP4R1-228ENST00000584074 CFAP44Q96MT7 982 aa28■■■□□ 2.07
PPP4R1-228ENST00000584074 RNF181Q9P0P0 153 aa28■■■□□ 2.07
PPP4R1-228ENST00000584074 ZNF219Q9P2Y4 722 aaPredicted RBP28■■■□□ 2.07
PPP4R1-228ENST00000584074 GPTP24298 496 aa27.98■■■□□ 2.07
PPP4R1-228ENST00000584074 STYK1Q6J9G0 422 aa27.98■■■□□ 2.07
PPP4R1-228ENST00000584074 C21orf2O43822 256 aa27.97■■■□□ 2.07
PPP4R1-228ENST00000584074 MASTLQ96GX5 879 aa27.97■■■□□ 2.07
PPP4R1-228ENST00000584074 UBN2Q6ZU65 1347 aa27.96■■■□□ 2.07
PPP4R1-228ENST00000584074 KLRG2A4D1S0 409 aaPredicted RBP27.96■■■□□ 2.07
PPP4R1-228ENST00000584074 ANP32CO43423 234 aa27.96■■■□□ 2.07
PPP4R1-228ENST00000584074 GTF2E1P29083 439 aaPredicted RBP27.96■■■□□ 2.07
PPP4R1-228ENST00000584074 PRELPP51888 382 aa27.96■■■□□ 2.07
PPP4R1-228ENST00000584074 CNKSR1Q969H4 720 aa27.96■■■□□ 2.07
PPP4R1-228ENST00000584074 MBIPQ9NS73 344 aa27.96■■■□□ 2.07
PPP4R1-228ENST00000584074 NFKBIEO00221 500 aa27.95■■■□□ 2.06
PPP4R1-228ENST00000584074 PRPF40BQ6NWY9 871 aaKnown RBP27.95■■■□□ 2.06
PPP4R1-228ENST00000584074 GIGYF2Q6Y7W6 1299 aaKnown RBP27.95■■■□□ 2.06
PPP4R1-228ENST00000584074 NUTM1Q86Y26 1132 aa27.95■■■□□ 2.06
PPP4R1-228ENST00000584074 ZNF34Q8IZ26 560 aa27.95■■■□□ 2.06
PPP4R1-228ENST00000584074 ZNF853P0CG23 659 aa27.94■■■□□ 2.06
PPP4R1-228ENST00000584074 COPS6Q7L5N1 327 aa27.94■■■□□ 2.06
PPP4R1-228ENST00000584074 NYXQ9GZU5 481 aa27.94■■■□□ 2.06
PPP4R1-228ENST00000584074 SENP3-EIF4A1A0A087X0R7 540 aa27.93■■■□□ 2.06
PPP4R1-228ENST00000584074 NPR1P16066 1061 aa27.93■■■□□ 2.06
PPP4R1-228ENST00000584074 LMNB1P20700 586 aa27.93■■■□□ 2.06
PPP4R1-228ENST00000584074 AIMP1Q12904 312 aaKnown RBP27.93■■■□□ 2.06
PPP4R1-228ENST00000584074 SUSD4Q5VX71 490 aa27.93■■■□□ 2.06
PPP4R1-228ENST00000584074 XAGE3Q8WTP9 111 aa27.93■■■□□ 2.06
PPP4R1-228ENST00000584074 MRS2Q9HD23 443 aa27.93■■■□□ 2.06
PPP4R1-228ENST00000584074 DDX21Q9NR30 783 aaKnown RBP eCLIP27.93■■■□□ 2.06
PPP4R1-228ENST00000584074 NUP98P52948 1817 aa27.92■■■□□ 2.06
PPP4R1-228ENST00000584074 ABCC12Q96J65 1359 aa27.92■■■□□ 2.06
PPP4R1-228ENST00000584074 KIF3CO14782 793 aa27.92■■■□□ 2.06
PPP4R1-228ENST00000584074 ERFEQ4G0M1 354 aa27.92■■■□□ 2.06
PPP4R1-228ENST00000584074 HDGFL1Q5TGJ6 251 aa27.92■■■□□ 2.06
PPP4R1-228ENST00000584074 IFT57Q9NWB7 429 aa27.92■■■□□ 2.06
PPP4R1-228ENST00000584074 CHPF2Q9P2E5 772 aa27.92■■■□□ 2.06
PPP4R1-228ENST00000584074 HOXB7P09629 217 aa27.91■■■□□ 2.06
PPP4R1-228ENST00000584074 CALD1Q05682 793 aaKnown RBP27.91■■■□□ 2.06
PPP4R1-228ENST00000584074 DUSP27Q5VZP5 1158 aa27.91■■■□□ 2.06
PPP4R1-228ENST00000584074 GNAI1P63096 354 aa27.9■■■□□ 2.06
PPP4R1-228ENST00000584074 NMRK2Q9NPI5 230 aa27.9■■■□□ 2.06
PPP4R1-228ENST00000584074 SBF1O95248 1867 aa27.89■■■□□ 2.05
PPP4R1-228ENST00000584074 IBTKQ9P2D0 1353 aaPredicted RBP27.88■■■□□ 2.05
PPP4R1-228ENST00000584074 SLX4Q8IY92 1834 aa27.88■■■□□ 2.05
PPP4R1-228ENST00000584074 NTSR2O95665 410 aa27.88■■■□□ 2.05
PPP4R1-228ENST00000584074 C7orf43Q8WVR3 580 aa27.87■■■□□ 2.05
PPP4R1-228ENST00000584074 TNRC6CQ9HCJ0 1690 aaKnown RBP27.87■■■□□ 2.05
PPP4R1-228ENST00000584074 PARP10Q53GL7 1025 aa27.86■■■□□ 2.05
PPP4R1-228ENST00000584074 PPP1R42Q7Z4L9 355 aa27.86■■■□□ 2.05
PPP4R1-228ENST00000584074 DBF4Q9UBU7 674 aaPredicted RBP27.86■■■□□ 2.05
PPP4R1-228ENST00000584074 ELL2O00472 640 aaPredicted RBP27.85■■■□□ 2.05
PPP4R1-228ENST00000584074 CRY2Q49AN0 593 aa27.85■■■□□ 2.05
PPP4R1-228ENST00000584074 KDM2BQ8NHM5 1336 aa27.85■■■□□ 2.05
PPP4R1-228ENST00000584074 SOGA3Q5TF21 947 aa27.84■■■□□ 2.05
PPP4R1-228ENST00000584074 TAOK3Q9H2K8 898 aa27.84■■■□□ 2.05
PPP4R1-228ENST00000584074 ZC3H4Q9UPT8 1303 aaKnown RBP27.84■■■□□ 2.05
PPP4R1-228ENST00000584074 ALDH1B1P30837 517 aa27.83■■■□□ 2.05
PPP4R1-228ENST00000584074 HSP90AB3PQ58FF7 597 aa27.83■■■□□ 2.05
PPP4R1-228ENST00000584074 OLFM4Q6UX06 510 aa27.83■■■□□ 2.05
PPP4R1-228ENST00000584074 UTP14AQ9BVJ6 771 aaKnown RBP27.83■■■□□ 2.05
PPP4R1-228ENST00000584074 RIC1Q4ADV7 1423 aa27.83■■■□□ 2.05
PPP4R1-228ENST00000584074 CACNA1SQ13698 1873 aa27.83■■■□□ 2.04
PPP4R1-228ENST00000584074 ARFGEF2Q9Y6D5 1785 aa27.82■■■□□ 2.04
PPP4R1-228ENST00000584074 TCIRG1Q13488 830 aa27.82■■■□□ 2.04
PPP4R1-228ENST00000584074 C3orf67Q6ZVT6 689 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms