RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 NUP98P52948 1817 aa18.17■□□□□ 0.5
GGA3-215ENST00000582821 MYL6BP14649 208 aa18.17■□□□□ 0.5
GGA3-215ENST00000582821 HLFQ16534 295 aa18.17■□□□□ 0.5
GGA3-215ENST00000582821 KRT24Q2M2I5 525 aa18.17■□□□□ 0.5
GGA3-215ENST00000582821 TTLL7Q6ZT98 887 aa18.17■□□□□ 0.5
GGA3-215ENST00000582821 PIM2Q9P1W9 311 aa18.17■□□□□ 0.5
GGA3-215ENST00000582821 MAP3K15Q6ZN16 1313 aa18.17■□□□□ 0.5
GGA3-215ENST00000582821 DUSP27Q5VZP5 1158 aa18.16■□□□□ 0.5
GGA3-215ENST00000582821 PRR5LQ6MZQ0 368 aa18.16■□□□□ 0.5
GGA3-215ENST00000582821 NGEFQ8N5V2 710 aa18.16■□□□□ 0.5
GGA3-215ENST00000582821 BRIP1Q9BX63 1249 aa18.16■□□□□ 0.5
GGA3-215ENST00000582821 DDX21Q9NR30 783 aaKnown RBP eCLIP18.16■□□□□ 0.5
GGA3-215ENST00000582821 PDZRN3Q9UPQ7 1066 aa18.16■□□□□ 0.5
GGA3-215ENST00000582821 KIF6Q6ZMV9 814 aa18.15■□□□□ 0.5
GGA3-215ENST00000582821 CHRNA5P30532 468 aa18.14■□□□□ 0.49
GGA3-215ENST00000582821 PROSER3Q2NL68 480 aa18.14■□□□□ 0.49
GGA3-215ENST00000582821 FAM9BQ8IZU0 186 aa18.14■□□□□ 0.49
GGA3-215ENST00000582821 NIP7Q9Y221 180 aaKnown RBP eCLIP18.14■□□□□ 0.49
GGA3-215ENST00000582821 IL16Q14005 1332 aa18.14■□□□□ 0.49
GGA3-215ENST00000582821 PDE6BP35913 854 aa18.13■□□□□ 0.49
GGA3-215ENST00000582821 HDGFL1Q5TGJ6 251 aa18.13■□□□□ 0.49
GGA3-215ENST00000582821 TPTE2Q6XPS3 522 aa18.13■□□□□ 0.49
GGA3-215ENST00000582821 GIGYF2Q6Y7W6 1299 aaKnown RBP18.13■□□□□ 0.49
GGA3-215ENST00000582821 CNBD1Q8NA66 436 aa18.13■□□□□ 0.49
GGA3-215ENST00000582821 WWC3Q9ULE0 1092 aa18.13■□□□□ 0.49
GGA3-215ENST00000582821 BCS1LQ9Y276 419 aa18.13■□□□□ 0.49
GGA3-215ENST00000582821 ARFGEF1Q9Y6D6 1849 aa18.13■□□□□ 0.49
GGA3-215ENST00000582821 ANKRD31Q8N7Z5 1873 aa18.13■□□□□ 0.49
GGA3-215ENST00000582821 H0YIN7 160 aa18.12■□□□□ 0.49
GGA3-215ENST00000582821 DALRD3Q5D0E6 543 aaKnown RBP18.12■□□□□ 0.49
GGA3-215ENST00000582821 NBPF5PQ86XG9 351 aaPredicted RBP18.12■□□□□ 0.49
GGA3-215ENST00000582821 WDR63Q8IWG1 891 aa18.12■□□□□ 0.49
GGA3-215ENST00000582821 NECTIN2Q92692 538 aa18.12■□□□□ 0.49
GGA3-215ENST00000582821 CHMP4AQ9BY43 222 aa18.12■□□□□ 0.49
GGA3-215ENST00000582821 DBF4Q9UBU7 674 aaPredicted RBP18.12■□□□□ 0.49
GGA3-215ENST00000582821 ATP10DQ9P241 1426 aa18.12■□□□□ 0.49
GGA3-215ENST00000582821 ANXA1P04083 346 aa18.11■□□□□ 0.49
GGA3-215ENST00000582821 ST5P78524 1137 aa18.11■□□□□ 0.49
GGA3-215ENST00000582821 COPS6Q7L5N1 327 aa18.11■□□□□ 0.49
GGA3-215ENST00000582821 C2CD5Q86YS7 1000 aa18.11■□□□□ 0.49
GGA3-215ENST00000582821 ZNF34Q8IZ26 560 aa18.11■□□□□ 0.49
GGA3-215ENST00000582821 DLEC1Q9Y238 1755 aa18.11■□□□□ 0.49
GGA3-215ENST00000582821 KLRG2A4D1S0 409 aaPredicted RBP18.1■□□□□ 0.49
GGA3-215ENST00000582821 C8orf58Q8NAV2 365 aa18.1■□□□□ 0.49
GGA3-215ENST00000582821 XAGE3Q8WTP9 111 aa18.1■□□□□ 0.49
GGA3-215ENST00000582821 ZBTB3Q9H5J0 574 aa18.1■□□□□ 0.49
GGA3-215ENST00000582821 CHPF2Q9P2E5 772 aa18.1■□□□□ 0.49
GGA3-215ENST00000582821 CCER2I3L3R5 266 aa18.09■□□□□ 0.49
GGA3-215ENST00000582821 NPHP1O15259 732 aa18.09■□□□□ 0.49
GGA3-215ENST00000582821 CCDC24Q8N4L8 307 aa18.09■□□□□ 0.49
GGA3-215ENST00000582821 HYPKQ9NX55 129 aa18.09■□□□□ 0.49
GGA3-215ENST00000582821 SENP3-EIF4A1A0A087X0R7 540 aa18.08■□□□□ 0.48
GGA3-215ENST00000582821 TTLL6Q8N841 843 aa18.08■□□□□ 0.48
GGA3-215ENST00000582821 NYXQ9GZU5 481 aa18.08■□□□□ 0.48
GGA3-215ENST00000582821 IBTKQ9P2D0 1353 aaPredicted RBP18.07■□□□□ 0.48
GGA3-215ENST00000582821 ELL2O00472 640 aaPredicted RBP18.07■□□□□ 0.48
GGA3-215ENST00000582821 SRGNP10124 158 aa18.07■□□□□ 0.48
GGA3-215ENST00000582821 AIMP1Q12904 312 aaKnown RBP18.07■□□□□ 0.48
GGA3-215ENST00000582821 PARP10Q53GL7 1025 aa18.07■□□□□ 0.48
GGA3-215ENST00000582821 HSP90AB3PQ58FF7 597 aa18.07■□□□□ 0.48
GGA3-215ENST00000582821 UBN2Q6ZU65 1347 aa18.06■□□□□ 0.48
GGA3-215ENST00000582821 TCIRG1Q13488 830 aa18.06■□□□□ 0.48
GGA3-215ENST00000582821 STYK1Q6J9G0 422 aa18.06■□□□□ 0.48
GGA3-215ENST00000582821 ARHGAP27Q6ZUM4 889 aa18.06■□□□□ 0.48
GGA3-215ENST00000582821 TSPYL6Q8N831 410 aa18.06■□□□□ 0.48
GGA3-215ENST00000582821 ZNF784Q8NCA9 323 aaPredicted RBP18.06■□□□□ 0.48
GGA3-215ENST00000582821 PLBD2Q8NHP8 589 aa18.06■□□□□ 0.48
GGA3-215ENST00000582821 TSR2Q969E8 191 aaKnown RBP18.06■□□□□ 0.48
GGA3-215ENST00000582821 SALL2Q9Y467 1007 aaPredicted RBP18.06■□□□□ 0.48
GGA3-215ENST00000582821 GPTP24298 496 aa18.05■□□□□ 0.48
GGA3-215ENST00000582821 CCDC30Q5VVM6 783 aa18.05■□□□□ 0.48
GGA3-215ENST00000582821 SUSD4Q5VX71 490 aa18.05■□□□□ 0.48
GGA3-215ENST00000582821 ANKRD13DQ6ZTN6 518 aa18.05■□□□□ 0.48
GGA3-215ENST00000582821 MASTLQ96GX5 879 aa18.05■□□□□ 0.48
GGA3-215ENST00000582821 FAM177BA6PVY3 158 aa18.04■□□□□ 0.48
GGA3-215ENST00000582821 GTF2E1P29083 439 aaPredicted RBP18.04■□□□□ 0.48
GGA3-215ENST00000582821 PPP1R42Q7Z4L9 355 aa18.04■□□□□ 0.48
GGA3-215ENST00000582821 CNKSR1Q969H4 720 aa18.04■□□□□ 0.48
GGA3-215ENST00000582821 ZNF622Q969S3 477 aaKnown RBP eCLIP18.04■□□□□ 0.488e-7■■□□□ 12.4
GGA3-215ENST00000582821 NTSR2O95665 410 aa18.03■□□□□ 0.48
GGA3-215ENST00000582821 ANKRD36CQ5JPF3 1778 aa18.03■□□□□ 0.48
GGA3-215ENST00000582821 RIC1Q4ADV7 1423 aa18.03■□□□□ 0.48
GGA3-215ENST00000582821 COL11A2P13942 1736 aaPredicted RBP18.03■□□□□ 0.48
GGA3-215ENST00000582821 CACNA1FO60840 1977 aa18.02■□□□□ 0.48
GGA3-215ENST00000582821 RNF123Q5XPI4 1314 aa18.02■□□□□ 0.48
GGA3-215ENST00000582821 ZNF521Q96K83 1311 aa18.02■□□□□ 0.48
GGA3-215ENST00000582821 FANCIQ9NVI1 1328 aa18.02■□□□□ 0.48
GGA3-215ENST00000582821 NPR1P16066 1061 aa18.02■□□□□ 0.48
GGA3-215ENST00000582821 ERFEQ4G0M1 354 aa18.02■□□□□ 0.48
GGA3-215ENST00000582821 SLC10A5Q5PT55 438 aa18.02■□□□□ 0.48
GGA3-215ENST00000582821 ADCY9O60503 1353 aa18.02■□□□□ 0.47
GGA3-215ENST00000582821 SBF1O95248 1867 aa18.01■□□□□ 0.47
GGA3-215ENST00000582821 GOLGA2Q08379 1002 aa18.01■□□□□ 0.47
GGA3-215ENST00000582821 TRIM28Q13263 835 aaKnown RBP18.01■□□□□ 0.47
GGA3-215ENST00000582821 TWISTNBQ3B726 338 aaPredicted RBP18.01■□□□□ 0.47
GGA3-215ENST00000582821 CRY2Q49AN0 593 aa18.01■□□□□ 0.47
GGA3-215ENST00000582821 NLRP10Q86W26 655 aa18.01■□□□□ 0.47
GGA3-215ENST00000582821 NUTM1Q86Y26 1132 aa18.01■□□□□ 0.47
GGA3-215ENST00000582821 ISCA1Q9BUE6 129 aa18.01■□□□□ 0.47
GGA3-215ENST00000582821 UTP14AQ9BVJ6 771 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms