RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 MYL6BP14649 208 aa13.43□□□□□ -0.26
TOP3A-212ENST00000582122 YBX3P16989 372 aaKnown RBP eCLIP13.43□□□□□ -0.26
TOP3A-212ENST00000582122 STK31Q9BXU1 1019 aa13.43□□□□□ -0.26
TOP3A-212ENST00000582122 PDZRN3Q9UPQ7 1066 aa13.43□□□□□ -0.26
TOP3A-212ENST00000582122 MAP3K15Q6ZN16 1313 aa13.42□□□□□ -0.26
TOP3A-212ENST00000582122 TGFB2P61812 414 aa13.42□□□□□ -0.26
TOP3A-212ENST00000582122 NFIXQ14938 502 aa13.42□□□□□ -0.26
TOP3A-212ENST00000582122 TWISTNBQ3B726 338 aaPredicted RBP13.42□□□□□ -0.26
TOP3A-212ENST00000582122 HSP90AB3PQ58FF7 597 aa13.42□□□□□ -0.26
TOP3A-212ENST00000582122 CARMIL3Q8ND23 1372 aa13.42□□□□□ -0.26
TOP3A-212ENST00000582122 FANCIQ9NVI1 1328 aa13.41□□□□□ -0.26
TOP3A-212ENST00000582122 POLRMTO00411 1230 aaKnown RBP13.41□□□□□ -0.26
TOP3A-212ENST00000582122 PIP4K2AP48426 406 aaPredicted RBP13.41□□□□□ -0.26
TOP3A-212ENST00000582122 PDIA6Q15084 440 aa13.41□□□□□ -0.26
TOP3A-212ENST00000582122 C8orf58Q8NAV2 365 aa13.41□□□□□ -0.26
TOP3A-212ENST00000582122 TSR2Q969E8 191 aaKnown RBP13.41□□□□□ -0.26
TOP3A-212ENST00000582122 BCL2L12Q9HB09 334 aa13.41□□□□□ -0.26
TOP3A-212ENST00000582122 GPBP1L1Q9HC44 474 aaPredicted RBP13.41□□□□□ -0.26
TOP3A-212ENST00000582122 CHPF2Q9P2E5 772 aa13.41□□□□□ -0.26
TOP3A-212ENST00000582122 ADCY9O60503 1353 aa13.41□□□□□ -0.26
TOP3A-212ENST00000582122 SCN7AQ01118 1682 aa13.4□□□□□ -0.26
TOP3A-212ENST00000582122 NPHP1O15259 732 aa13.4□□□□□ -0.26
TOP3A-212ENST00000582122 DDX58O95786 925 aaKnown RBP13.4□□□□□ -0.26
TOP3A-212ENST00000582122 KRT24Q2M2I5 525 aa13.4□□□□□ -0.26
TOP3A-212ENST00000582122 ZNF428Q96B54 188 aa13.4□□□□□ -0.26
TOP3A-212ENST00000582122 ELL2O00472 640 aaPredicted RBP13.39□□□□□ -0.27
TOP3A-212ENST00000582122 SERPINB2P05120 415 aa13.39□□□□□ -0.27
TOP3A-212ENST00000582122 PARP10Q53GL7 1025 aa13.39□□□□□ -0.27
TOP3A-212ENST00000582122 TBC1D9BQ66K14 1250 aa13.39□□□□□ -0.27
TOP3A-212ENST00000582122 TPTE2Q6XPS3 522 aa13.39□□□□□ -0.27
TOP3A-212ENST00000582122 GIGYF2Q6Y7W6 1299 aaKnown RBP13.39□□□□□ -0.27
TOP3A-212ENST00000582122 COPS6Q7L5N1 327 aa13.39□□□□□ -0.27
TOP3A-212ENST00000582122 LRP10Q7Z4F1 713 aa13.39□□□□□ -0.27
TOP3A-212ENST00000582122 PLBD2Q8NHP8 589 aa13.39□□□□□ -0.27
TOP3A-212ENST00000582122 NECTIN2Q92692 538 aa13.39□□□□□ -0.27
TOP3A-212ENST00000582122 NYXQ9GZU5 481 aa13.39□□□□□ -0.27
TOP3A-212ENST00000582122 NIP7Q9Y221 180 aaKnown RBP eCLIP13.39□□□□□ -0.27
TOP3A-212ENST00000582122 CT47B1P0C2W7 299 aaPredicted RBP13.38□□□□□ -0.27
TOP3A-212ENST00000582122 HSPA6P17066 643 aa13.38□□□□□ -0.27
TOP3A-212ENST00000582122 ST5P78524 1137 aa13.38□□□□□ -0.27
TOP3A-212ENST00000582122 DDR1Q08345 913 aa13.38□□□□□ -0.27
TOP3A-212ENST00000582122 ANKRD13DQ6ZTN6 518 aa13.38□□□□□ -0.27
TOP3A-212ENST00000582122 XAGE3Q8WTP9 111 aa13.38□□□□□ -0.27
TOP3A-212ENST00000582122 C10orf71Q711Q0 1435 aa13.38□□□□□ -0.27
TOP3A-212ENST00000582122 RNF123Q5XPI4 1314 aa13.38□□□□□ -0.27
TOP3A-212ENST00000582122 BCORQ6W2J9 1755 aa13.37□□□□□ -0.27
TOP3A-212ENST00000582122 IBTKQ9P2D0 1353 aaPredicted RBP13.37□□□□□ -0.27
TOP3A-212ENST00000582122 PDE6BP35913 854 aa13.37□□□□□ -0.27
TOP3A-212ENST00000582122 EXOSC9Q06265 439 aaKnown RBP13.37□□□□□ -0.27
TOP3A-212ENST00000582122 SLFN5Q08AF3 891 aa13.37□□□□□ -0.27
TOP3A-212ENST00000582122 BICDL1Q6ZP65 573 aa13.37□□□□□ -0.27
TOP3A-212ENST00000582122 TTLL7Q6ZT98 887 aa13.37□□□□□ -0.27
TOP3A-212ENST00000582122 PPP1R42Q7Z4L9 355 aa13.37□□□□□ -0.27
TOP3A-212ENST00000582122 NBPF5PQ86XG9 351 aaPredicted RBP13.37□□□□□ -0.27
TOP3A-212ENST00000582122 TSPYL6Q8N831 410 aa13.37□□□□□ -0.27
TOP3A-212ENST00000582122 CNBD1Q8NA66 436 aa13.37□□□□□ -0.27
TOP3A-212ENST00000582122 VAMP4O75379 141 aa13.36□□□□□ -0.27
TOP3A-212ENST00000582122 GTF2E1P29083 439 aaPredicted RBP13.36□□□□□ -0.27
TOP3A-212ENST00000582122 AIMP1Q12904 312 aaKnown RBP13.36□□□□□ -0.27
TOP3A-212ENST00000582122 PROSER3Q2NL68 480 aa13.36□□□□□ -0.27
TOP3A-212ENST00000582122 BRIP1Q9BX63 1249 aa13.36□□□□□ -0.27
TOP3A-212ENST00000582122 ZBTB3Q9H5J0 574 aa13.36□□□□□ -0.27
TOP3A-212ENST00000582122 CACNA1FO60840 1977 aa13.36□□□□□ -0.27
TOP3A-212ENST00000582122 HSP90B1P14625 803 aaKnown RBP13.35□□□□□ -0.27
TOP3A-212ENST00000582122 HNRNPUQ00839 825 aaKnown RBP eCLIP13.35□□□□□ -0.27
TOP3A-212ENST00000582122 HLFQ16534 295 aa13.35□□□□□ -0.27
TOP3A-212ENST00000582122 RIC3Q7Z5B4 369 aa13.35□□□□□ -0.27
TOP3A-212ENST00000582122 ZNF34Q8IZ26 560 aa13.35□□□□□ -0.27
TOP3A-212ENST00000582122 KIF13BQ9NQT8 1826 aa13.34□□□□□ -0.27
TOP3A-212ENST00000582122 NRXN2Q9P2S2 1712 aa13.34□□□□□ -0.27
TOP3A-212ENST00000582122 ANXA1P04083 346 aa13.34□□□□□ -0.27
TOP3A-212ENST00000582122 SLC4A2P04920 1241 aa13.34□□□□□ -0.27
TOP3A-212ENST00000582122 TRIM28Q13263 835 aaKnown RBP13.34□□□□□ -0.27
TOP3A-212ENST00000582122 TCIRG1Q13488 830 aa13.34□□□□□ -0.27
TOP3A-212ENST00000582122 SPINK5Q9NQ38 1064 aaPredicted RBP13.34□□□□□ -0.27
TOP3A-212ENST00000582122 H0YIN7 160 aa13.33□□□□□ -0.28
TOP3A-212ENST00000582122 NEXNQ0ZGT2 675 aa13.33□□□□□ -0.28
TOP3A-212ENST00000582122 PRR5LQ6MZQ0 368 aa13.33□□□□□ -0.28
TOP3A-212ENST00000582122 TRMT2AQ8IZ69 625 aaKnown RBP13.33□□□□□ -0.28
TOP3A-212ENST00000582122 PIM2Q9P1W9 311 aa13.33□□□□□ -0.28
TOP3A-212ENST00000582122 NUP98P52948 1817 aa13.32□□□□□ -0.28
TOP3A-212ENST00000582122 KSR2Q6VAB6 950 aa13.32□□□□□ -0.28
TOP3A-212ENST00000582122 ZNF526Q8TF50 670 aaPredicted RBP13.32□□□□□ -0.28
TOP3A-212ENST00000582122 UTP14AQ9BVJ6 771 aaKnown RBP13.32□□□□□ -0.28
TOP3A-212ENST00000582122 ZBED9Q6R2W3 1325 aa13.32□□□□□ -0.28
TOP3A-212ENST00000582122 PXDNLA1KZ92 1463 aa13.31□□□□□ -0.28
TOP3A-212ENST00000582122 PHAXQ9H814 394 aaKnown RBP13.31□□□□□ -0.28
TOP3A-212ENST00000582122 AFDNP55196 1824 aaKnown RBP13.31□□□□□ -0.28
TOP3A-212ENST00000582122 RIC1Q4ADV7 1423 aa13.3□□□□□ -0.28
TOP3A-212ENST00000582122 DPEP1P16444 411 aa13.3□□□□□ -0.28
TOP3A-212ENST00000582122 GPTP24298 496 aa13.3□□□□□ -0.28
TOP3A-212ENST00000582122 FLIIQ13045 1269 aa13.3□□□□□ -0.28
TOP3A-212ENST00000582122 ALDH1L2Q3SY69 923 aa13.3□□□□□ -0.28
TOP3A-212ENST00000582122 NLRP10Q86W26 655 aa13.3□□□□□ -0.28
TOP3A-212ENST00000582122 CCDC191Q8NCU4 936 aa13.3□□□□□ -0.28
TOP3A-212ENST00000582122 A0A0G2JLW4 131 aa13.29□□□□□ -0.28
TOP3A-212ENST00000582122 KLRG2A4D1S0 409 aaPredicted RBP13.29□□□□□ -0.28
TOP3A-212ENST00000582122 FKBP5Q13451 457 aaPredicted RBP13.29□□□□□ -0.28
TOP3A-212ENST00000582122 DALRD3Q5D0E6 543 aaKnown RBP13.29□□□□□ -0.28
TOP3A-212ENST00000582122 SLC10A5Q5PT55 438 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms