RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 PRKRIP1Q9H875 184 aaPredicted RBP29.38■■■□□ 2.29
CASC3-207ENST00000581849 RNF181Q9P0P0 153 aa29.38■■■□□ 2.29
CASC3-207ENST00000581849 TSPYL4Q9UJ04 414 aa29.38■■■□□ 2.29
CASC3-207ENST00000581849 WDR43Q15061 677 aaKnown RBP eCLIP29.37■■■□□ 2.29
CASC3-207ENST00000581849 NBPF5PQ86XG9 351 aaPredicted RBP29.37■■■□□ 2.29
CASC3-207ENST00000581849 ERVV-1B6SEH8 477 aa29.36■■■□□ 2.29
CASC3-207ENST00000581849 RUNDC1Q96C34 613 aa29.36■■■□□ 2.29
CASC3-207ENST00000581849 STYK1Q6J9G0 422 aa29.35■■■□□ 2.29
CASC3-207ENST00000581849 TPTE2Q6XPS3 522 aa29.35■■■□□ 2.29
CASC3-207ENST00000581849 ZNF622Q969S3 477 aaKnown RBP eCLIP29.35■■■□□ 2.298e-7■■■□□ 15.4
CASC3-207ENST00000581849 NIP7Q9Y221 180 aaKnown RBP eCLIP29.35■■■□□ 2.29
CASC3-207ENST00000581849 ARFGEF2Q9Y6D5 1785 aa29.34■■■□□ 2.29
CASC3-207ENST00000581849 CNKSR1Q969H4 720 aa29.34■■■□□ 2.29
CASC3-207ENST00000581849 SRGNP10124 158 aa29.33■■■□□ 2.29
CASC3-207ENST00000581849 LMNB1P20700 586 aa29.33■■■□□ 2.29
CASC3-207ENST00000581849 CCDC24Q8N4L8 307 aa29.33■■■□□ 2.29
CASC3-207ENST00000581849 KDM2BQ8NHM5 1336 aa29.33■■■□□ 2.29
CASC3-207ENST00000581849 MAP3K15Q6ZN16 1313 aa29.32■■■□□ 2.28
CASC3-207ENST00000581849 MASTLQ96GX5 879 aa29.32■■■□□ 2.28
CASC3-207ENST00000581849 KLRG2A4D1S0 409 aaPredicted RBP29.31■■■□□ 2.28
CASC3-207ENST00000581849 RASSF7Q02833 373 aa29.31■■■□□ 2.28
CASC3-207ENST00000581849 HLFQ16534 295 aa29.31■■■□□ 2.28
CASC3-207ENST00000581849 KIF6Q6ZMV9 814 aa29.31■■■□□ 2.28
CASC3-207ENST00000581849 NUP98P52948 1817 aa29.31■■■□□ 2.28
CASC3-207ENST00000581849 ZEB1P37275 1124 aaPredicted RBP29.3■■■□□ 2.28
CASC3-207ENST00000581849 CCDC146Q8IYE0 955 aa29.3■■■□□ 2.28
CASC3-207ENST00000581849 RRP7AQ9Y3A4 280 aaKnown RBP29.3■■■□□ 2.28
CASC3-207ENST00000581849 FER1L6Q2WGJ9 1857 aa29.29■■■□□ 2.28
CASC3-207ENST00000581849 NFKBIEO00221 500 aa29.29■■■□□ 2.28
CASC3-207ENST00000581849 TOMM70O94826 608 aa29.29■■■□□ 2.28
CASC3-207ENST00000581849 SOGA3Q5TF21 947 aa29.29■■■□□ 2.28
CASC3-207ENST00000581849 ADAMTS8Q9UP79 889 aa29.29■■■□□ 2.28
CASC3-207ENST00000581849 IBTKQ9P2D0 1353 aaPredicted RBP29.28■■■□□ 2.28
CASC3-207ENST00000581849 NMRK2Q9NPI5 230 aa29.28■■■□□ 2.28
CASC3-207ENST00000581849 TNRC6CQ9HCJ0 1690 aaKnown RBP29.28■■■□□ 2.28
CASC3-207ENST00000581849 LTBP3Q9NS15 1303 aa29.27■■■□□ 2.28
CASC3-207ENST00000581849 NYXQ9GZU5 481 aa29.27■■■□□ 2.28
CASC3-207ENST00000581849 SLX4Q8IY92 1834 aa29.27■■■□□ 2.28
CASC3-207ENST00000581849 CHL1O00533 1208 aa29.26■■■□□ 2.27
CASC3-207ENST00000581849 C21orf2O43822 256 aa29.26■■■□□ 2.27
CASC3-207ENST00000581849 MYL6BP14649 208 aa29.26■■■□□ 2.27
CASC3-207ENST00000581849 NPR1P16066 1061 aa29.26■■■□□ 2.27
CASC3-207ENST00000581849 HSPA6P17066 643 aa29.26■■■□□ 2.27
CASC3-207ENST00000581849 PRPF40BQ6NWY9 871 aaKnown RBP29.26■■■□□ 2.27
CASC3-207ENST00000581849 TTLL7Q6ZT98 887 aa29.26■■■□□ 2.27
CASC3-207ENST00000581849 NGEFQ8N5V2 710 aa29.26■■■□□ 2.27
CASC3-207ENST00000581849 TRIM35Q9UPQ4 493 aa29.26■■■□□ 2.27
CASC3-207ENST00000581849 CCDC88AQ3V6T2 1871 aa29.25■■■□□ 2.27
CASC3-207ENST00000581849 PRELPP51888 382 aa29.25■■■□□ 2.27
CASC3-207ENST00000581849 TIAM2Q8IVF5 1701 aa29.25■■■□□ 2.27
CASC3-207ENST00000581849 CACNA1SQ13698 1873 aa29.24■■■□□ 2.27
CASC3-207ENST00000581849 NEUROD2Q15784 382 aa29.24■■■□□ 2.27
CASC3-207ENST00000581849 RIC1Q4ADV7 1423 aa29.24■■■□□ 2.27
CASC3-207ENST00000581849 LRP10Q7Z4F1 713 aa29.24■■■□□ 2.27
CASC3-207ENST00000581849 DICER1Q9UPY3 1922 aaKnown RBP29.23■■■□□ 2.27
CASC3-207ENST00000581849 GTF2E1P29083 439 aaPredicted RBP29.22■■■□□ 2.27
CASC3-207ENST00000581849 PDIA6Q15084 440 aa29.22■■■□□ 2.27
CASC3-207ENST00000581849 GIGYF2Q6Y7W6 1299 aaKnown RBP29.22■■■□□ 2.27
CASC3-207ENST00000581849 RBM46Q8TBY0 533 aaKnown RBP29.21■■■□□ 2.27
CASC3-207ENST00000581849 TAOK3Q9H2K8 898 aa29.21■■■□□ 2.27
CASC3-207ENST00000581849 ZBTB3Q9H5J0 574 aa29.21■■■□□ 2.27
CASC3-207ENST00000581849 GLTPD2A6NH11 291 aa29.2■■■□□ 2.26
CASC3-207ENST00000581849 EIF2S2P20042 333 aaKnown RBP29.2■■■□□ 2.26
CASC3-207ENST00000581849 ZNF34Q8IZ26 560 aa29.2■■■□□ 2.26
CASC3-207ENST00000581849 FAM177BA6PVY3 158 aa29.19■■■□□ 2.26
CASC3-207ENST00000581849 HOXB7P09629 217 aa29.19■■■□□ 2.26
CASC3-207ENST00000581849 C16orf71Q8IYS4 520 aaPredicted RBP29.19■■■□□ 2.26
CASC3-207ENST00000581849 C7orf43Q8WVR3 580 aa29.19■■■□□ 2.26
CASC3-207ENST00000581849 CRY2Q49AN0 593 aa29.18■■■□□ 2.26
CASC3-207ENST00000581849 PARP10Q53GL7 1025 aa29.18■■■□□ 2.26
CASC3-207ENST00000581849 ZNF219Q9P2Y4 722 aaPredicted RBP29.18■■■□□ 2.26
CASC3-207ENST00000581849 UBN2Q6ZU65 1347 aa29.18■■■□□ 2.26
CASC3-207ENST00000581849 ABCC12Q96J65 1359 aa29.17■■■□□ 2.26
CASC3-207ENST00000581849 ALDH1B1P30837 517 aa29.17■■■□□ 2.26
CASC3-207ENST00000581849 CCDC93Q567U6 631 aa29.17■■■□□ 2.26
CASC3-207ENST00000581849 CFAP44Q96MT7 982 aa29.16■■■□□ 2.26
CASC3-207ENST00000581849 PROSER3Q2NL68 480 aa29.15■■■□□ 2.26
CASC3-207ENST00000581849 RRAGCQ9HB90 399 aa29.15■■■□□ 2.26
CASC3-207ENST00000581849 DDX21Q9NR30 783 aaKnown RBP eCLIP29.15■■■□□ 2.26
CASC3-207ENST00000581849 CEP350Q5VT06 3117 aa29.15■■■□□ 2.26
CASC3-207ENST00000581849 GPTP24298 496 aa29.14■■■□□ 2.26
CASC3-207ENST00000581849 FSTL1Q12841 308 aa29.14■■■□□ 2.26
CASC3-207ENST00000581849 ERFEQ4G0M1 354 aa29.14■■■□□ 2.26
CASC3-207ENST00000581849 SUSD4Q5VX71 490 aa29.14■■■□□ 2.26
CASC3-207ENST00000581849 PPP1R42Q7Z4L9 355 aa29.14■■■□□ 2.26
CASC3-207ENST00000581849 RNF123Q5XPI4 1314 aa29.14■■■□□ 2.25
CASC3-207ENST00000581849 NTSR2O95665 410 aa29.13■■■□□ 2.25
CASC3-207ENST00000581849 CALD1Q05682 793 aaKnown RBP29.13■■■□□ 2.25
CASC3-207ENST00000581849 HSP90AB3PQ58FF7 597 aa29.13■■■□□ 2.25
CASC3-207ENST00000581849 DPY19L2Q6NUT2 758 aa29.13■■■□□ 2.25
CASC3-207ENST00000581849 NUTM1Q86Y26 1132 aa29.13■■■□□ 2.25
CASC3-207ENST00000581849 LAS1LQ9Y4W2 734 aaKnown RBP29.13■■■□□ 2.25
CASC3-207ENST00000581849 ANKRD36CQ5JPF3 1778 aa29.13■■■□□ 2.25
CASC3-207ENST00000581849 WDR90Q96KV7 1748 aa29.12■■■□□ 2.25
CASC3-207ENST00000581849 VEGFAP15692 232 aaPredicted RBP29.12■■■□□ 2.25
CASC3-207ENST00000581849 HOXA10P31260 410 aaPredicted RBP29.11■■■□□ 2.25
CASC3-207ENST00000581849 APLP1P51693 650 aa29.11■■■□□ 2.25
CASC3-207ENST00000581849 RTKN2Q8IZC4 609 aa29.11■■■□□ 2.25
CASC3-207ENST00000581849 APAF1O14727 1248 aa29.1■■■□□ 2.25
CASC3-207ENST00000581849 ANXA1P04083 346 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms