RNA–Protein interactions for RNA: ENST00000581540.5

SUPT4H1-207, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-207ENST00000581540 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.67□□□□□ -0.71e-6■■□□□ 12.2
SUPT4H1-207ENST00000581540 STIM2Q9P246 746 aa10.67□□□□□ -0.7
SUPT4H1-207ENST00000581540 KIAA0556O60303 1618 aa10.66□□□□□ -0.7
SUPT4H1-207ENST00000581540 HS2ST1Q7LGA3 356 aa10.66□□□□□ -0.7
SUPT4H1-207ENST00000581540 JAZF1Q86VZ6 243 aa10.66□□□□□ -0.7
SUPT4H1-207ENST00000581540 MCF2L2Q86YR7 1114 aa10.66□□□□□ -0.7
SUPT4H1-207ENST00000581540 SCUBE3Q8IX30 993 aa10.66□□□□□ -0.7
SUPT4H1-207ENST00000581540 USP5P45974 858 aa10.65□□□□□ -0.7
SUPT4H1-207ENST00000581540 ZNF394Q53GI3 561 aa10.65□□□□□ -0.7
SUPT4H1-207ENST00000581540 PCDH10Q9P2E7 1040 aa10.65□□□□□ -0.7
SUPT4H1-207ENST00000581540 AK5Q9Y6K8 562 aa10.65□□□□□ -0.7
SUPT4H1-207ENST00000581540 GABBR2O75899 941 aa10.64□□□□□ -0.71
SUPT4H1-207ENST00000581540 FGRP09769 529 aa10.64□□□□□ -0.71
SUPT4H1-207ENST00000581540 XRCC5P13010 732 aaKnown RBP10.64□□□□□ -0.71
SUPT4H1-207ENST00000581540 NBPF6Q5VWK0 638 aa10.64□□□□□ -0.71
SUPT4H1-207ENST00000581540 SH3RF1Q7Z6J0 888 aa10.64□□□□□ -0.71
SUPT4H1-207ENST00000581540 BPHLQ86WA6 291 aaPredicted RBP10.64□□□□□ -0.71
SUPT4H1-207ENST00000581540 CKAP2LQ8IYA6 745 aa10.64□□□□□ -0.71
SUPT4H1-207ENST00000581540 LRCH3Q96II8 777 aa10.64□□□□□ -0.71
SUPT4H1-207ENST00000581540 NBPF4Q96M43 638 aa10.64□□□□□ -0.71
SUPT4H1-207ENST00000581540 NIF3L1Q9GZT8 377 aa10.64□□□□□ -0.71
SUPT4H1-207ENST00000581540 ESF1Q9H501 851 aaKnown RBP10.64□□□□□ -0.71
SUPT4H1-207ENST00000581540 CDV3Q9UKY7 258 aaKnown RBP10.64□□□□□ -0.71
SUPT4H1-207ENST00000581540 SPG7Q9UQ90 795 aa10.64□□□□□ -0.71
SUPT4H1-207ENST00000581540 BCORL1Q5H9F3 1711 aa10.64□□□□□ -0.71
SUPT4H1-207ENST00000581540 ATAD2Q6PL18 1390 aa10.64□□□□□ -0.71
SUPT4H1-207ENST00000581540 UNC93B1Q9H1C4 597 aa10.63□□□□□ -0.71
SUPT4H1-207ENST00000581540 KLHL42Q9P2K6 505 aa10.63□□□□□ -0.71
SUPT4H1-207ENST00000581540 DMGDHQ9UI17 866 aaKnown RBP10.63□□□□□ -0.71
SUPT4H1-207ENST00000581540 PCDHGB7Q9Y5F8 929 aa10.63□□□□□ -0.71
SUPT4H1-207ENST00000581540 ZBTB24O43167 697 aaPredicted RBP10.62□□□□□ -0.71
SUPT4H1-207ENST00000581540 PSEN2P49810 448 aa10.62□□□□□ -0.71
SUPT4H1-207ENST00000581540 MMP16P51512 607 aa10.62□□□□□ -0.71
SUPT4H1-207ENST00000581540 RACK1P63244 317 aaKnown RBP10.62□□□□□ -0.71
SUPT4H1-207ENST00000581540 PTPN12Q05209 780 aaKnown RBP10.62□□□□□ -0.71
SUPT4H1-207ENST00000581540 ERFEQ4G0M1 354 aa10.62□□□□□ -0.71
SUPT4H1-207ENST00000581540 FAM9AQ8IZU1 332 aaPredicted RBP10.62□□□□□ -0.71
SUPT4H1-207ENST00000581540 ZFRQ96KR1 1074 aaKnown RBP10.62□□□□□ -0.71
SUPT4H1-207ENST00000581540 SETDB2Q96T68 719 aa10.62□□□□□ -0.71
SUPT4H1-207ENST00000581540 SAP130Q9H0E3 1048 aa10.62□□□□□ -0.71
SUPT4H1-207ENST00000581540 MYH16Q9H6N6 1097 aa10.62□□□□□ -0.71
SUPT4H1-207ENST00000581540 RIPOR2Q9Y4F9 1068 aa10.62□□□□□ -0.71
SUPT4H1-207ENST00000581540 MRPL42Q9Y6G3 142 aaKnown RBP10.62□□□□□ -0.71
SUPT4H1-207ENST00000581540 AGERQ15109 404 aa10.61□□□□□ -0.71
SUPT4H1-207ENST00000581540 TRIM52Q96A61 297 aa10.61□□□□□ -0.71
SUPT4H1-207ENST00000581540 TMX1Q9H3N1 280 aa10.61□□□□□ -0.71
SUPT4H1-207ENST00000581540 SUGT1Q9Y2Z0 365 aa10.61□□□□□ -0.71
SUPT4H1-207ENST00000581540 K7ELQ4 463 aaPredicted RBP10.6□□□□□ -0.71
SUPT4H1-207ENST00000581540 ARHGAP33O14559 1287 aa10.6□□□□□ -0.71
SUPT4H1-207ENST00000581540 EIF4BP23588 611 aaKnown RBP10.6□□□□□ -0.71
SUPT4H1-207ENST00000581540 GJA8P48165 433 aa10.6□□□□□ -0.71
SUPT4H1-207ENST00000581540 HSP90AB2PQ58FF8 381 aa10.6□□□□□ -0.71
SUPT4H1-207ENST00000581540 GJD3Q8N144 294 aa10.6□□□□□ -0.71
SUPT4H1-207ENST00000581540 PCDHB3Q9Y5E6 796 aa10.6□□□□□ -0.71
SUPT4H1-207ENST00000581540 COL4A3BPQ9Y5P4 624 aa10.6□□□□□ -0.71
SUPT4H1-207ENST00000581540 GOLGA3Q08378 1498 aa10.6□□□□□ -0.71
SUPT4H1-207ENST00000581540 ABCA8O94911 1581 aa10.6□□□□□ -0.71
SUPT4H1-207ENST00000581540 MADDQ8WXG6 1647 aa10.59□□□□□ -0.71
SUPT4H1-207ENST00000581540 WASLO00401 505 aaPredicted RBP10.59□□□□□ -0.71
SUPT4H1-207ENST00000581540 ENPP3O14638 875 aa10.59□□□□□ -0.71
SUPT4H1-207ENST00000581540 SRA1Q9HD15 236 aaKnown RBP10.59□□□□□ -0.71
SUPT4H1-207ENST00000581540 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.59□□□□□ -0.71
SUPT4H1-207ENST00000581540 GGT7Q9UJ14 662 aa10.59□□□□□ -0.71
SUPT4H1-207ENST00000581540 DISP3Q9P2K9 1392 aa10.59□□□□□ -0.71
SUPT4H1-207ENST00000581540 RAPGEF2Q9Y4G8 1499 aa10.59□□□□□ -0.71
SUPT4H1-207ENST00000581540 TNFRSF10BO14763 440 aa10.58□□□□□ -0.72
SUPT4H1-207ENST00000581540 NEFLP07196 543 aa10.58□□□□□ -0.72
SUPT4H1-207ENST00000581540 CTSHP09668 335 aa10.58□□□□□ -0.72
SUPT4H1-207ENST00000581540 HOXB1P14653 301 aaPredicted RBP10.58□□□□□ -0.72
SUPT4H1-207ENST00000581540 ATF4P18848 351 aaPredicted RBP10.58□□□□□ -0.72
SUPT4H1-207ENST00000581540 GORABQ5T7V8 394 aa10.58□□□□□ -0.72
SUPT4H1-207ENST00000581540 TNS4Q8IZW8 715 aa10.58□□□□□ -0.72
SUPT4H1-207ENST00000581540 STAG2Q8N3U4 1231 aa10.58□□□□□ -0.72
SUPT4H1-207ENST00000581540 MKL1Q969V6 931 aa10.58□□□□□ -0.72
SUPT4H1-207ENST00000581540 NEO1Q92859 1461 aa10.57□□□□□ -0.72
SUPT4H1-207ENST00000581540 TMEM229AB2RXF0 380 aa10.57□□□□□ -0.72
SUPT4H1-207ENST00000581540 PPP1R12BO60237 982 aaPredicted RBP10.57□□□□□ -0.72
SUPT4H1-207ENST00000581540 COX20Q5RI15 118 aa10.57□□□□□ -0.72
SUPT4H1-207ENST00000581540 ILDR2Q71H61 639 aa10.57□□□□□ -0.72
SUPT4H1-207ENST00000581540 FILIP1Q7Z7B0 1213 aa10.57□□□□□ -0.72
SUPT4H1-207ENST00000581540 CSRNP1Q96S65 589 aa10.57□□□□□ -0.72
SUPT4H1-207ENST00000581540 TSPAN10Q9H1Z9 355 aaPredicted RBP10.57□□□□□ -0.72
SUPT4H1-207ENST00000581540 ABCA9Q8IUA7 1624 aa10.57□□□□□ -0.72
SUPT4H1-207ENST00000581540 LOC102724159A0A0B4J2E5 919 aa10.56□□□□□ -0.72
SUPT4H1-207ENST00000581540 MZF1P28698 734 aaPredicted RBP10.56□□□□□ -0.72
SUPT4H1-207ENST00000581540 PWP2Q15269 919 aaKnown RBP10.56□□□□□ -0.72
SUPT4H1-207ENST00000581540 GPRASP2Q96D09 838 aa10.56□□□□□ -0.72
SUPT4H1-207ENST00000581540 SPSB2Q99619 263 aa10.56□□□□□ -0.72
SUPT4H1-207ENST00000581540 POLIQ9UNA4 740 aa10.56□□□□□ -0.72
SUPT4H1-207ENST00000581540 VPS9D1Q9Y2B5 631 aa10.56□□□□□ -0.72
SUPT4H1-207ENST00000581540 CHMP3Q9Y3E7 222 aa10.56□□□□□ -0.72
SUPT4H1-207ENST00000581540 CTTNBP2Q8WZ74 1663 aa10.56□□□□□ -0.72
SUPT4H1-207ENST00000581540 RIMS1Q86UR5 1692 aaKnown RBP10.55□□□□□ -0.72
SUPT4H1-207ENST00000581540 PPP1R12AO14974 1030 aaPredicted RBP10.55□□□□□ -0.72
SUPT4H1-207ENST00000581540 TPD52L2O43399 206 aaKnown RBP10.55□□□□□ -0.72
SUPT4H1-207ENST00000581540 DNAJC6O75061 913 aa10.55□□□□□ -0.72
SUPT4H1-207ENST00000581540 SPC25Q9HBM1 224 aa10.55□□□□□ -0.72
SUPT4H1-207ENST00000581540 MAGEC2Q9UBF1 373 aaPredicted RBP10.55□□□□□ -0.72
SUPT4H1-207ENST00000581540 PCSK2P16519 638 aa10.54□□□□□ -0.72
SUPT4H1-207ENST00000581540 GDF10P55107 478 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms