RNA–Protein interactions for RNA: ENST00000581166.5

SUPT4H1-205, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-205ENST00000581166 H0YIN7 160 aa18.34■□□□□ 0.53
SUPT4H1-205ENST00000581166 EIF2S2P20042 333 aaKnown RBP18.34■□□□□ 0.53
SUPT4H1-205ENST00000581166 C2CD5Q86YS7 1000 aa18.34■□□□□ 0.53
SUPT4H1-205ENST00000581166 PDZRN3Q9UPQ7 1066 aa18.34■□□□□ 0.53
SUPT4H1-205ENST00000581166 ANKRD31Q8N7Z5 1873 aa18.34■□□□□ 0.53
SUPT4H1-205ENST00000581166 NPHP1O15259 732 aa18.33■□□□□ 0.53
SUPT4H1-205ENST00000581166 PDE6BP35913 854 aa18.33■□□□□ 0.53
SUPT4H1-205ENST00000581166 HLFQ16534 295 aa18.33■□□□□ 0.53
SUPT4H1-205ENST00000581166 ARHGAP27Q6ZUM4 889 aa18.33■□□□□ 0.53
SUPT4H1-205ENST00000581166 MRS2Q9HD23 443 aa18.33■□□□□ 0.53
SUPT4H1-205ENST00000581166 NIP7Q9Y221 180 aaKnown RBP eCLIP18.33■□□□□ 0.53
SUPT4H1-205ENST00000581166 MAP3K15Q6ZN16 1313 aa18.33■□□□□ 0.52
SUPT4H1-205ENST00000581166 ST5P78524 1137 aa18.32■□□□□ 0.52
SUPT4H1-205ENST00000581166 CALD1Q05682 793 aaKnown RBP18.32■□□□□ 0.52
SUPT4H1-205ENST00000581166 PDIA6Q15084 440 aa18.32■□□□□ 0.52
SUPT4H1-205ENST00000581166 KIF6Q6ZMV9 814 aa18.32■□□□□ 0.52
SUPT4H1-205ENST00000581166 TTLL7Q6ZT98 887 aa18.32■□□□□ 0.52
SUPT4H1-205ENST00000581166 NBPF5PQ86XG9 351 aaPredicted RBP18.32■□□□□ 0.52
SUPT4H1-205ENST00000581166 ADCY9O60503 1353 aa18.32■□□□□ 0.52
SUPT4H1-205ENST00000581166 ZNF853P0CG23 659 aa18.32■□□□□ 0.52
SUPT4H1-205ENST00000581166 LRP10Q7Z4F1 713 aa18.32■□□□□ 0.52
SUPT4H1-205ENST00000581166 CCDC24Q8N4L8 307 aa18.32■□□□□ 0.52
SUPT4H1-205ENST00000581166 NUP98P52948 1817 aa18.32■□□□□ 0.52
SUPT4H1-205ENST00000581166 KRT24Q2M2I5 525 aa18.31■□□□□ 0.52
SUPT4H1-205ENST00000581166 TPTE2Q6XPS3 522 aa18.31■□□□□ 0.52
SUPT4H1-205ENST00000581166 TTLL6Q8N841 843 aa18.31■□□□□ 0.52
SUPT4H1-205ENST00000581166 HOXB7P09629 217 aa18.3■□□□□ 0.52
SUPT4H1-205ENST00000581166 MBIPQ9NS73 344 aa18.3■□□□□ 0.52
SUPT4H1-205ENST00000581166 IFT57Q9NWB7 429 aa18.3■□□□□ 0.52
SUPT4H1-205ENST00000581166 ATP10DQ9P241 1426 aa18.29■□□□□ 0.52
SUPT4H1-205ENST00000581166 GNAI1P63096 354 aa18.29■□□□□ 0.52
SUPT4H1-205ENST00000581166 PROSER3Q2NL68 480 aa18.29■□□□□ 0.52
SUPT4H1-205ENST00000581166 NECTIN2Q92692 538 aa18.29■□□□□ 0.52
SUPT4H1-205ENST00000581166 ZBTB3Q9H5J0 574 aa18.29■□□□□ 0.52
SUPT4H1-205ENST00000581166 GIGYF2Q6Y7W6 1299 aaKnown RBP18.28■□□□□ 0.52
SUPT4H1-205ENST00000581166 ZNF622Q969S3 477 aaKnown RBP eCLIP18.28■□□□□ 0.52
SUPT4H1-205ENST00000581166 DDX21Q9NR30 783 aaKnown RBP eCLIP18.28■□□□□ 0.52
SUPT4H1-205ENST00000581166 COL11A2P13942 1736 aaPredicted RBP18.28■□□□□ 0.52
SUPT4H1-205ENST00000581166 ANXA1P04083 346 aa18.27■□□□□ 0.52
SUPT4H1-205ENST00000581166 CCDC27Q2M243 656 aa18.27■□□□□ 0.52
SUPT4H1-205ENST00000581166 FAM177BA6PVY3 158 aa18.26■□□□□ 0.51
SUPT4H1-205ENST00000581166 SRGNP10124 158 aa18.26■□□□□ 0.51
SUPT4H1-205ENST00000581166 HDGFL1Q5TGJ6 251 aa18.26■□□□□ 0.51
SUPT4H1-205ENST00000581166 DUSP27Q5VZP5 1158 aa18.26■□□□□ 0.51
SUPT4H1-205ENST00000581166 NYXQ9GZU5 481 aa18.26■□□□□ 0.51
SUPT4H1-205ENST00000581166 NCBP3Q53F19 620 aaKnown RBP18.25■□□□□ 0.51
SUPT4H1-205ENST00000581166 STYK1Q6J9G0 422 aa18.25■□□□□ 0.51
SUPT4H1-205ENST00000581166 COPS6Q7L5N1 327 aa18.25■□□□□ 0.51
SUPT4H1-205ENST00000581166 ZNF34Q8IZ26 560 aa18.25■□□□□ 0.51
SUPT4H1-205ENST00000581166 MASTLQ96GX5 879 aa18.25■□□□□ 0.51
SUPT4H1-205ENST00000581166 IBTKQ9P2D0 1353 aaPredicted RBP18.24■□□□□ 0.51
SUPT4H1-205ENST00000581166 UBN2Q6ZU65 1347 aa18.24■□□□□ 0.51
SUPT4H1-205ENST00000581166 KLRG2A4D1S0 409 aaPredicted RBP18.24■□□□□ 0.51
SUPT4H1-205ENST00000581166 GPTP24298 496 aa18.24■□□□□ 0.51
SUPT4H1-205ENST00000581166 GTF2E1P29083 439 aaPredicted RBP18.24■□□□□ 0.51
SUPT4H1-205ENST00000581166 CNKSR1Q969H4 720 aa18.24■□□□□ 0.51
SUPT4H1-205ENST00000581166 CHPF2Q9P2E5 772 aa18.24■□□□□ 0.51
SUPT4H1-205ENST00000581166 DBF4Q9UBU7 674 aaPredicted RBP18.24■□□□□ 0.51
SUPT4H1-205ENST00000581166 C9orf131Q5VYM1 1079 aa18.23■□□□□ 0.51
SUPT4H1-205ENST00000581166 XAGE3Q8WTP9 111 aa18.23■□□□□ 0.51
SUPT4H1-205ENST00000581166 GPBP1L1Q9HC44 474 aaPredicted RBP18.23■□□□□ 0.51
SUPT4H1-205ENST00000581166 AIMP1Q12904 312 aaKnown RBP18.23■□□□□ 0.51
SUPT4H1-205ENST00000581166 WWC1Q8IX03 1113 aa18.23■□□□□ 0.51
SUPT4H1-205ENST00000581166 SBF1O95248 1867 aa18.22■□□□□ 0.51
SUPT4H1-205ENST00000581166 NPR1P16066 1061 aa18.22■□□□□ 0.51
SUPT4H1-205ENST00000581166 PARP10Q53GL7 1025 aa18.22■□□□□ 0.51
SUPT4H1-205ENST00000581166 HSP90AB3PQ58FF7 597 aa18.22■□□□□ 0.51
SUPT4H1-205ENST00000581166 SUSD4Q5VX71 490 aa18.22■□□□□ 0.51
SUPT4H1-205ENST00000581166 ZNF526Q8TF50 670 aaPredicted RBP18.22■□□□□ 0.51
SUPT4H1-205ENST00000581166 ARFGEF2Q9Y6D5 1785 aa18.21■□□□□ 0.51
SUPT4H1-205ENST00000581166 SENP3-EIF4A1A0A087X0R7 540 aa18.21■□□□□ 0.51
SUPT4H1-205ENST00000581166 C21orf2O43822 256 aa18.21■□□□□ 0.51
SUPT4H1-205ENST00000581166 ERFEQ4G0M1 354 aa18.21■□□□□ 0.51
SUPT4H1-205ENST00000581166 PPP1R42Q7Z4L9 355 aa18.21■□□□□ 0.51
SUPT4H1-205ENST00000581166 NUTM1Q86Y26 1132 aa18.21■□□□□ 0.51
SUPT4H1-205ENST00000581166 HYPKQ9NX55 129 aa18.21■□□□□ 0.51
SUPT4H1-205ENST00000581166 RNF181Q9P0P0 153 aa18.21■□□□□ 0.51
SUPT4H1-205ENST00000581166 RIC1Q4ADV7 1423 aa18.2■□□□□ 0.5
SUPT4H1-205ENST00000581166 ABCC12Q96J65 1359 aa18.2■□□□□ 0.5
SUPT4H1-205ENST00000581166 SLX4Q8IY92 1834 aa18.2■□□□□ 0.5
SUPT4H1-205ENST00000581166 NTSR2O95665 410 aa18.2■□□□□ 0.5
SUPT4H1-205ENST00000581166 RASSF7Q02833 373 aa18.2■□□□□ 0.5
SUPT4H1-205ENST00000581166 PRPF40BQ6NWY9 871 aaKnown RBP18.2■□□□□ 0.5
SUPT4H1-205ENST00000581166 C8orf58Q8NAV2 365 aa18.2■□□□□ 0.5
SUPT4H1-205ENST00000581166 CACNA1SQ13698 1873 aa18.2■□□□□ 0.5
SUPT4H1-205ENST00000581166 ANKRD36CQ5JPF3 1778 aa18.19■□□□□ 0.5
SUPT4H1-205ENST00000581166 IL16Q14005 1332 aa18.19■□□□□ 0.5
SUPT4H1-205ENST00000581166 ELL2O00472 640 aaPredicted RBP18.19■□□□□ 0.5
SUPT4H1-205ENST00000581166 LMNB1P20700 586 aa18.19■□□□□ 0.5
SUPT4H1-205ENST00000581166 TCIRG1Q13488 830 aa18.19■□□□□ 0.5
SUPT4H1-205ENST00000581166 CHMP4AQ9BY43 222 aa18.19■□□□□ 0.5
SUPT4H1-205ENST00000581166 ZNF219Q9P2Y4 722 aaPredicted RBP18.19■□□□□ 0.5
SUPT4H1-205ENST00000581166 TNRC6CQ9HCJ0 1690 aaKnown RBP18.18■□□□□ 0.5
SUPT4H1-205ENST00000581166 NFKBIEO00221 500 aa18.18■□□□□ 0.5
SUPT4H1-205ENST00000581166 CRY2Q49AN0 593 aa18.18■□□□□ 0.5
SUPT4H1-205ENST00000581166 SOGA3Q5TF21 947 aa18.18■□□□□ 0.5
SUPT4H1-205ENST00000581166 ANKRD13DQ6ZTN6 518 aa18.18■□□□□ 0.5
SUPT4H1-205ENST00000581166 FAM9BQ8IZU0 186 aa18.18■□□□□ 0.5
SUPT4H1-205ENST00000581166 PLBD2Q8NHP8 589 aa18.18■□□□□ 0.5
SUPT4H1-205ENST00000581166 UTP14AQ9BVJ6 771 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms