RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 RGMBQ6NW40 437 aa8.84□□□□□ -0.99
CCDC178-209ENST00000579947 SYNE4Q8N205 404 aa8.84□□□□□ -0.99
CCDC178-209ENST00000579947 USHBP1Q8N6Y0 703 aa8.84□□□□□ -0.99
CCDC178-209ENST00000579947 PDE6BP35913 854 aa8.84□□□□□ -0.99
CCDC178-209ENST00000579947 CNKSR1Q969H4 720 aa8.84□□□□□ -0.99
CCDC178-209ENST00000579947 ZNF296Q8WUU4 475 aaPredicted RBP8.83□□□□□ -1
CCDC178-209ENST00000579947 PGAP2Q9UHJ9 254 aa8.83□□□□□ -1
CCDC178-209ENST00000579947 A0A1W2PPC1 479 aa8.83□□□□□ -1
CCDC178-209ENST00000579947 CRKLP46109 303 aaKnown RBP8.83□□□□□ -1
CCDC178-209ENST00000579947 USPL1Q5W0Q7 1092 aa8.83□□□□□ -1
CCDC178-209ENST00000579947 ZPR1O75312 459 aa8.82□□□□□ -1
CCDC178-209ENST00000579947 SCNN1DP51172 638 aa8.82□□□□□ -1
CCDC178-209ENST00000579947 HUNKP57058 714 aa8.82□□□□□ -1
CCDC178-209ENST00000579947 CCDC93Q567U6 631 aa8.82□□□□□ -1
CCDC178-209ENST00000579947 ANKRD13DQ6ZTN6 518 aa8.82□□□□□ -1
CCDC178-209ENST00000579947 BRIP1Q9BX63 1249 aa8.82□□□□□ -1
CCDC178-209ENST00000579947 EDC4Q6P2E9 1401 aaKnown RBP8.82□□□□□ -1
CCDC178-209ENST00000579947 EPS15P42566 896 aa8.82□□□□□ -1
CCDC178-209ENST00000579947 NCAPD2Q15021 1401 aa8.82□□□□□ -1
CCDC178-209ENST00000579947 GPR153Q6NV75 609 aa8.82□□□□□ -1
CCDC178-209ENST00000579947 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.82□□□□□ -1
CCDC178-209ENST00000579947 C7orf43Q8WVR3 580 aa8.82□□□□□ -1
CCDC178-209ENST00000579947 CSRNP1Q96S65 589 aa8.82□□□□□ -1
CCDC178-209ENST00000579947 RBM42Q9BTD8 480 aaKnown RBP8.82□□□□□ -1
CCDC178-209ENST00000579947 PRPF40BQ6NWY9 871 aaKnown RBP8.81□□□□□ -1
CCDC178-209ENST00000579947 AMPHP49418 695 aa8.81□□□□□ -1
CCDC178-209ENST00000579947 SNX27Q96L92 541 aa8.81□□□□□ -1
CCDC178-209ENST00000579947 GLIS2Q9BZE0 524 aaPredicted RBP8.81□□□□□ -1
CCDC178-209ENST00000579947 SLC10A3P09131 477 aa8.81□□□□□ -1
CCDC178-209ENST00000579947 IARSP41252 1262 aaKnown RBP8.81□□□□□ -1
CCDC178-209ENST00000579947 ZNF277Q9NRM2 450 aaPredicted RBP8.81□□□□□ -1
CCDC178-209ENST00000579947 ANKRD26Q9UPS8 1709 aa8.8□□□□□ -1
CCDC178-209ENST00000579947 EN2P19622 333 aaPredicted RBP8.8□□□□□ -1
CCDC178-209ENST00000579947 NARFQ9UHQ1 456 aa8.8□□□□□ -1
CCDC178-209ENST00000579947 SPG7Q9UQ90 795 aa8.8□□□□□ -1
CCDC178-209ENST00000579947 ADARB2Q9NS39 739 aaKnown RBP8.8□□□□□ -1
CCDC178-209ENST00000579947 SOX1O00570 391 aaPredicted RBP8.79□□□□□ -1
CCDC178-209ENST00000579947 SOS1Q07889 1333 aaPredicted RBP8.79□□□□□ -1
CCDC178-209ENST00000579947 A0A1W2PP64 1363 aa8.79□□□□□ -1
CCDC178-209ENST00000579947 EIF6P56537 245 aaKnown RBP8.79□□□□□ -1
CCDC178-209ENST00000579947 INTS5Q6P9B9 1019 aaKnown RBP8.79□□□□□ -1
CCDC178-209ENST00000579947 ZNF408Q9H9D4 720 aa8.79□□□□□ -1
CCDC178-209ENST00000579947 BCL2L12Q9HB09 334 aa8.79□□□□□ -1
CCDC178-209ENST00000579947 TRIOBPQ9H2D6 2365 aa8.78□□□□□ -1
CCDC178-209ENST00000579947 GJA3Q9Y6H8 435 aa8.78□□□□□ -1
CCDC178-209ENST00000579947 COL4A5P29400 1685 aa8.78□□□□□ -1
CCDC178-209ENST00000579947 RTKN2Q8IZC4 609 aa8.78□□□□□ -1
CCDC178-209ENST00000579947 ZC3H15Q8WU90 426 aaKnown RBP8.78□□□□□ -1
CCDC178-209ENST00000579947 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.78□□□□□ -1
CCDC178-209ENST00000579947 ARMC5Q96C12 935 aa8.77□□□□□ -1
CCDC178-209ENST00000579947 MASTLQ96GX5 879 aa8.77□□□□□ -1
CCDC178-209ENST00000579947 GPR25O00155 361 aa8.77□□□□□ -1.01
CCDC178-209ENST00000579947 ZNF157P51786 506 aaPredicted RBP8.77□□□□□ -1.01
CCDC178-209ENST00000579947 CDC37L1Q7L3B6 337 aa8.77□□□□□ -1.01
CCDC178-209ENST00000579947 SCN7AQ01118 1682 aa8.77□□□□□ -1.01
CCDC178-209ENST00000579947 SYNGAP1Q96PV0 1343 aa8.77□□□□□ -1.01
CCDC178-209ENST00000579947 SRGNP10124 158 aa8.77□□□□□ -1.01
CCDC178-209ENST00000579947 PHKG2P15735 406 aa8.77□□□□□ -1.01
CCDC178-209ENST00000579947 CCDC24Q8N4L8 307 aa8.77□□□□□ -1.01
CCDC178-209ENST00000579947 SNED1Q8TER0 1413 aa8.76□□□□□ -1.01
CCDC178-209ENST00000579947 ERVV-2B6SEH9 535 aa8.76□□□□□ -1.01
CCDC178-209ENST00000579947 FKTNO75072 461 aa8.76□□□□□ -1.01
CCDC178-209ENST00000579947 LRCH3Q96II8 777 aa8.76□□□□□ -1.01
CCDC178-209ENST00000579947 CFHR5Q9BXR6 569 aa8.76□□□□□ -1.01
CCDC178-209ENST00000579947 IFNL2Q8IZJ0 200 aa8.76□□□□□ -1.01
CCDC178-209ENST00000579947 JDP2Q8WYK2 163 aa8.76□□□□□ -1.01
CCDC178-209ENST00000579947 RAPGEFL1Q9UHV5 662 aa8.76□□□□□ -1.01
CCDC178-209ENST00000579947 MRC1P22897 1456 aa8.76□□□□□ -1.01
CCDC178-209ENST00000579947 COL15A1P39059 1388 aa8.75□□□□□ -1.01
CCDC178-209ENST00000579947 PRR5LQ6MZQ0 368 aa8.75□□□□□ -1.01
CCDC178-209ENST00000579947 GBA2Q9HCG7 927 aaPredicted RBP8.75□□□□□ -1.01
CCDC178-209ENST00000579947 GPRC5DQ9NZD1 345 aa8.75□□□□□ -1.01
CCDC178-209ENST00000579947 SZT2Q5T011 3432 aa8.75□□□□□ -1.01
CCDC178-209ENST00000579947 LOC105371045A0A1W2PR82 267 aa8.75□□□□□ -1.01
CCDC178-209ENST00000579947 TBC1D8O95759 1140 aa8.75□□□□□ -1.01
CCDC178-209ENST00000579947 TONSLQ96HA7 1378 aa8.75□□□□□ -1.01
CCDC178-209ENST00000579947 C2orf69Q8N8R5 385 aa8.74□□□□□ -1.01
CCDC178-209ENST00000579947 PSMD1Q99460 953 aa8.74□□□□□ -1.01
CCDC178-209ENST00000579947 HDGFL2Q7Z4V5 671 aaPredicted RBP8.74□□□□□ -1.01
CCDC178-209ENST00000579947 RASAL3Q86YV0 1011 aa8.74□□□□□ -1.01
CCDC178-209ENST00000579947 DEFB123Q8N688 67 aa8.74□□□□□ -1.01
CCDC178-209ENST00000579947 MTMR10Q9NXD2 777 aa8.73□□□□□ -1.01
CCDC178-209ENST00000579947 KIF24Q5T7B8 1368 aa8.73□□□□□ -1.01
CCDC178-209ENST00000579947 CDHR2Q9BYE9 1310 aa8.73□□□□□ -1.01
CCDC178-209ENST00000579947 TMEM106CQ9BVX2 250 aa8.73□□□□□ -1.01
CCDC178-209ENST00000579947 KDM3BQ7LBC6 1761 aa8.72□□□□□ -1.01
CCDC178-209ENST00000579947 USP48Q86UV5 1035 aa8.72□□□□□ -1.01
CCDC178-209ENST00000579947 COG3Q96JB2 828 aa8.72□□□□□ -1.01
CCDC178-209ENST00000579947 OTOP1Q7RTM1 612 aa8.71□□□□□ -1.02
CCDC178-209ENST00000579947 PTPN22Q9Y2R2 807 aa8.71□□□□□ -1.02
CCDC178-209ENST00000579947 ARIH1Q9Y4X5 557 aaPredicted RBP8.71□□□□□ -1.02
CCDC178-209ENST00000579947 ZNF609O15014 1411 aa8.71□□□□□ -1.02
CCDC178-209ENST00000579947 NPR1P16066 1061 aa8.7□□□□□ -1.02
CCDC178-209ENST00000579947 SYMPKQ92797 1274 aaKnown RBP8.7□□□□□ -1.02
CCDC178-209ENST00000579947 TM4SF4P48230 202 aa8.7□□□□□ -1.02
CCDC178-209ENST00000579947 HIRAP54198 1017 aaPredicted RBP8.7□□□□□ -1.02
CCDC178-209ENST00000579947 TRIM17Q9Y577 477 aa8.7□□□□□ -1.02
CCDC178-209ENST00000579947 FLT4P35916 1363 aa8.7□□□□□ -1.02
CCDC178-209ENST00000579947 ST5P78524 1137 aa8.7□□□□□ -1.02
CCDC178-209ENST00000579947 TBC1D9BQ66K14 1250 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms