RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 ERVV-1B6SEH8 477 aa18.78■□□□□ 0.6
MKS1-207ENST00000578789 DUSP27Q5VZP5 1158 aa18.78■□□□□ 0.6
MKS1-207ENST00000578789 BICDL1Q6ZP65 573 aa18.78■□□□□ 0.6
MKS1-207ENST00000578789 CHD4Q14839 1912 aa18.77■□□□□ 0.6
MKS1-207ENST00000578789 GPR162Q16538 588 aa18.77■□□□□ 0.6
MKS1-207ENST00000578789 PROSER3Q2NL68 480 aa18.77■□□□□ 0.6
MKS1-207ENST00000578789 HDGFL1Q5TGJ6 251 aa18.77■□□□□ 0.6
MKS1-207ENST00000578789 WDR63Q8IWG1 891 aa18.77■□□□□ 0.6
MKS1-207ENST00000578789 DDX21Q9NR30 783 aaKnown RBP eCLIP18.77■□□□□ 0.6
MKS1-207ENST00000578789 YBX3P16989 372 aaKnown RBP eCLIP18.76■□□□□ 0.59
MKS1-207ENST00000578789 HLFQ16534 295 aa18.76■□□□□ 0.59
MKS1-207ENST00000578789 KIF6Q6ZMV9 814 aa18.76■□□□□ 0.59
MKS1-207ENST00000578789 TTLL7Q6ZT98 887 aa18.76■□□□□ 0.59
MKS1-207ENST00000578789 SETDB2Q96T68 719 aa18.76■□□□□ 0.59
MKS1-207ENST00000578789 ANKRD36CQ5JPF3 1778 aa18.76■□□□□ 0.59
MKS1-207ENST00000578789 ARFGEF1Q9Y6D6 1849 aa18.75■□□□□ 0.59
MKS1-207ENST00000578789 NECTIN2Q92692 538 aa18.75■□□□□ 0.59
MKS1-207ENST00000578789 ANXA1P04083 346 aa18.74■□□□□ 0.59
MKS1-207ENST00000578789 DPEP1P16444 411 aa18.74■□□□□ 0.59
MKS1-207ENST00000578789 DIEXFQ68CQ4 756 aaKnown RBP18.74■□□□□ 0.59
MKS1-207ENST00000578789 PRR5LQ6MZQ0 368 aa18.74■□□□□ 0.59
MKS1-207ENST00000578789 PELP1Q8IZL8 1130 aaKnown RBP18.74■□□□□ 0.59
MKS1-207ENST00000578789 TSR2Q969E8 191 aaKnown RBP18.74■□□□□ 0.59
MKS1-207ENST00000578789 CHPF2Q9P2E5 772 aa18.74■□□□□ 0.59
MKS1-207ENST00000578789 COL11A2P13942 1736 aaPredicted RBP18.74■□□□□ 0.59
MKS1-207ENST00000578789 A0A0G2JLW4 131 aa18.73■□□□□ 0.59
MKS1-207ENST00000578789 KCNA3P22001 575 aa18.73■□□□□ 0.59
MKS1-207ENST00000578789 C8orf58Q8NAV2 365 aa18.73■□□□□ 0.59
MKS1-207ENST00000578789 DBF4Q9UBU7 674 aaPredicted RBP18.73■□□□□ 0.59
MKS1-207ENST00000578789 NIP7Q9Y221 180 aaKnown RBP eCLIP18.73■□□□□ 0.59
MKS1-207ENST00000578789 ZNF521Q96K83 1311 aa18.73■□□□□ 0.59
MKS1-207ENST00000578789 IBTKQ9P2D0 1353 aaPredicted RBP18.72■□□□□ 0.59
MKS1-207ENST00000578789 GRIN3BO60391 1043 aa18.72■□□□□ 0.59
MKS1-207ENST00000578789 GIGYF2Q6Y7W6 1299 aaKnown RBP18.72■□□□□ 0.59
MKS1-207ENST00000578789 CNBD1Q8NA66 436 aa18.72■□□□□ 0.59
MKS1-207ENST00000578789 ZBTB3Q9H5J0 574 aa18.72■□□□□ 0.59
MKS1-207ENST00000578789 SALL2Q9Y467 1007 aaPredicted RBP18.72■□□□□ 0.59
MKS1-207ENST00000578789 FANCIQ9NVI1 1328 aa18.72■□□□□ 0.59
MKS1-207ENST00000578789 COPS6Q7L5N1 327 aa18.71■□□□□ 0.59
MKS1-207ENST00000578789 TSPYL6Q8N831 410 aa18.71■□□□□ 0.59
MKS1-207ENST00000578789 XAGE3Q8WTP9 111 aa18.71■□□□□ 0.59
MKS1-207ENST00000578789 CHRNA5P30532 468 aa18.7■□□□□ 0.58
MKS1-207ENST00000578789 NBPF5PQ86XG9 351 aaPredicted RBP18.7■□□□□ 0.58
MKS1-207ENST00000578789 BRIP1Q9BX63 1249 aa18.7■□□□□ 0.58
MKS1-207ENST00000578789 HYPKQ9NX55 129 aa18.7■□□□□ 0.58
MKS1-207ENST00000578789 ARFGEF2Q9Y6D5 1785 aa18.7■□□□□ 0.58
MKS1-207ENST00000578789 ELL2O00472 640 aaPredicted RBP18.69■□□□□ 0.58
MKS1-207ENST00000578789 ST5P78524 1137 aa18.69■□□□□ 0.58
MKS1-207ENST00000578789 ZNF34Q8IZ26 560 aa18.69■□□□□ 0.58
MKS1-207ENST00000578789 CHMP4AQ9BY43 222 aa18.69■□□□□ 0.58
MKS1-207ENST00000578789 PDZRN3Q9UPQ7 1066 aa18.69■□□□□ 0.58
MKS1-207ENST00000578789 UBN2Q6ZU65 1347 aa18.69■□□□□ 0.58
MKS1-207ENST00000578789 RIC1Q4ADV7 1423 aa18.68■□□□□ 0.58
MKS1-207ENST00000578789 PIM2Q9P1W9 311 aa18.68■□□□□ 0.58
MKS1-207ENST00000578789 WWC3Q9ULE0 1092 aa18.68■□□□□ 0.58
MKS1-207ENST00000578789 TNRC6CQ9HCJ0 1690 aaKnown RBP18.68■□□□□ 0.58
MKS1-207ENST00000578789 PDE6BP35913 854 aa18.67■□□□□ 0.58
MKS1-207ENST00000578789 AIMP1Q12904 312 aaKnown RBP18.67■□□□□ 0.58
MKS1-207ENST00000578789 TWISTNBQ3B726 338 aaPredicted RBP18.67■□□□□ 0.58
MKS1-207ENST00000578789 CCDC30Q5VVM6 783 aa18.67■□□□□ 0.58
MKS1-207ENST00000578789 TPTE2Q6XPS3 522 aa18.67■□□□□ 0.58
MKS1-207ENST00000578789 MIER1Q8N108 512 aa18.67■□□□□ 0.58
MKS1-207ENST00000578789 SPINK5Q9NQ38 1064 aaPredicted RBP18.67■□□□□ 0.58
MKS1-207ENST00000578789 NPHP1O15259 732 aa18.66■□□□□ 0.58
MKS1-207ENST00000578789 HSP90AB3PQ58FF7 597 aa18.66■□□□□ 0.58
MKS1-207ENST00000578789 C2CD5Q86YS7 1000 aa18.66■□□□□ 0.58
MKS1-207ENST00000578789 CCDC24Q8N4L8 307 aa18.66■□□□□ 0.58
MKS1-207ENST00000578789 PLBD2Q8NHP8 589 aa18.66■□□□□ 0.58
MKS1-207ENST00000578789 NYXQ9GZU5 481 aa18.66■□□□□ 0.58
MKS1-207ENST00000578789 BCS1LQ9Y276 419 aa18.66■□□□□ 0.58
MKS1-207ENST00000578789 CACNA1FO60840 1977 aa18.66■□□□□ 0.58
MKS1-207ENST00000578789 GPTP24298 496 aa18.65■□□□□ 0.58
MKS1-207ENST00000578789 PARP10Q53GL7 1025 aa18.65■□□□□ 0.58
MKS1-207ENST00000578789 MYH16Q9H6N6 1097 aa18.65■□□□□ 0.58
MKS1-207ENST00000578789 ABCC12Q96J65 1359 aa18.65■□□□□ 0.58
MKS1-207ENST00000578789 KLRG2A4D1S0 409 aaPredicted RBP18.64■□□□□ 0.57
MKS1-207ENST00000578789 H0YIN7 160 aa18.64■□□□□ 0.57
MKS1-207ENST00000578789 NTSR2O95665 410 aa18.64■□□□□ 0.57
MKS1-207ENST00000578789 YY1P25490 414 aa18.64■□□□□ 0.57
MKS1-207ENST00000578789 GOLGA2Q08379 1002 aa18.64■□□□□ 0.57
MKS1-207ENST00000578789 DALRD3Q5D0E6 543 aaKnown RBP18.64■□□□□ 0.57
MKS1-207ENST00000578789 SUSD4Q5VX71 490 aa18.64■□□□□ 0.57
MKS1-207ENST00000578789 FAM177BA6PVY3 158 aa18.63■□□□□ 0.57
MKS1-207ENST00000578789 TCIRG1Q13488 830 aa18.63■□□□□ 0.57
MKS1-207ENST00000578789 ANKRD13DQ6ZTN6 518 aa18.63■□□□□ 0.57
MKS1-207ENST00000578789 PHAXQ9H814 394 aaKnown RBP18.63■□□□□ 0.57
MKS1-207ENST00000578789 CACNA1SQ13698 1873 aa18.63■□□□□ 0.57
MKS1-207ENST00000578789 SRGNP10124 158 aa18.62■□□□□ 0.57
MKS1-207ENST00000578789 EXOSC9Q06265 439 aaKnown RBP18.62■□□□□ 0.57
MKS1-207ENST00000578789 PPP1R42Q7Z4L9 355 aa18.62■□□□□ 0.57
MKS1-207ENST00000578789 RNF123Q5XPI4 1314 aa18.62■□□□□ 0.57
MKS1-207ENST00000578789 VAMP4O75379 141 aa18.61■□□□□ 0.57
MKS1-207ENST00000578789 STYK1Q6J9G0 422 aa18.61■□□□□ 0.57
MKS1-207ENST00000578789 NUTM1Q86Y26 1132 aa18.61■□□□□ 0.57
MKS1-207ENST00000578789 TTLL6Q8N841 843 aa18.61■□□□□ 0.57
MKS1-207ENST00000578789 STK31Q9BXU1 1019 aa18.61■□□□□ 0.57
MKS1-207ENST00000578789 GOLGB1Q14789 3259 aaKnown RBP18.61■□□□□ 0.57
MKS1-207ENST00000578789 GTF2E1P29083 439 aaPredicted RBP18.6■□□□□ 0.57
MKS1-207ENST00000578789 ERFEQ4G0M1 354 aa18.6■□□□□ 0.57
MKS1-207ENST00000578789 NLRP10Q86W26 655 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms