RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 CLEC4GQ6UXB4 293 aa17.82■□□□□ 0.44
CSNK1D-208ENST00000578501 DZIP3Q86Y13 1208 aaKnown RBP17.82■□□□□ 0.44
CSNK1D-208ENST00000578501 CFAP44Q96MT7 982 aa17.82■□□□□ 0.44
CSNK1D-208ENST00000578501 SCN7AQ01118 1682 aa17.81■□□□□ 0.44
CSNK1D-208ENST00000578501 PIP4K2AP48426 406 aaPredicted RBP17.81■□□□□ 0.44
CSNK1D-208ENST00000578501 HTRA3P83110 453 aa17.81■□□□□ 0.44
CSNK1D-208ENST00000578501 PIM2Q9P1W9 311 aa17.81■□□□□ 0.44
CSNK1D-208ENST00000578501 ZNF853P0CG23 659 aa17.8■□□□□ 0.44
CSNK1D-208ENST00000578501 CCDC27Q2M243 656 aa17.8■□□□□ 0.44
CSNK1D-208ENST00000578501 TBC1D9BQ66K14 1250 aa17.8■□□□□ 0.44
CSNK1D-208ENST00000578501 SMC1BQ8NDV3 1235 aa17.8■□□□□ 0.44
CSNK1D-208ENST00000578501 N4BP2Q86UW6 1770 aaPredicted RBP17.79■□□□□ 0.44
CSNK1D-208ENST00000578501 SERPINB2P05120 415 aa17.79■□□□□ 0.44
CSNK1D-208ENST00000578501 IFT57Q9NWB7 429 aa17.79■□□□□ 0.44
CSNK1D-208ENST00000578501 ZNF652Q9Y2D9 606 aa17.79■□□□□ 0.44
CSNK1D-208ENST00000578501 LAS1LQ9Y4W2 734 aaKnown RBP17.79■□□□□ 0.44
CSNK1D-208ENST00000578501 NRXN2Q9P2S2 1712 aa17.78■□□□□ 0.44
CSNK1D-208ENST00000578501 HOXB7P09629 217 aa17.78■□□□□ 0.44
CSNK1D-208ENST00000578501 DALRD3Q5D0E6 543 aaKnown RBP17.78■□□□□ 0.44
CSNK1D-208ENST00000578501 RRAGCQ9HB90 399 aa17.78■□□□□ 0.44
CSNK1D-208ENST00000578501 KIAA1551Q9HCM1 1747 aa17.78■□□□□ 0.44
CSNK1D-208ENST00000578501 CARMIL3Q8ND23 1372 aa17.78■□□□□ 0.44
CSNK1D-208ENST00000578501 BCORQ6W2J9 1755 aa17.77■□□□□ 0.44
CSNK1D-208ENST00000578501 ERVV-1B6SEH8 477 aa17.77■□□□□ 0.44
CSNK1D-208ENST00000578501 BICDL1Q6ZP65 573 aa17.77■□□□□ 0.44
CSNK1D-208ENST00000578501 SETDB2Q96T68 719 aa17.77■□□□□ 0.44
CSNK1D-208ENST00000578501 RNF181Q9P0P0 153 aa17.77■□□□□ 0.44
CSNK1D-208ENST00000578501 KCNA3P22001 575 aa17.76■□□□□ 0.43
CSNK1D-208ENST00000578501 GNAI1P63096 354 aa17.76■□□□□ 0.43
CSNK1D-208ENST00000578501 MBIPQ9NS73 344 aa17.76■□□□□ 0.43
CSNK1D-208ENST00000578501 EIF2S2P20042 333 aaKnown RBP17.75■□□□□ 0.43
CSNK1D-208ENST00000578501 PDIA6Q15084 440 aa17.75■□□□□ 0.43
CSNK1D-208ENST00000578501 LRP10Q7Z4F1 713 aa17.75■□□□□ 0.43
CSNK1D-208ENST00000578501 AFDNP55196 1824 aaKnown RBP17.75■□□□□ 0.43
CSNK1D-208ENST00000578501 ZC3H4Q9UPT8 1303 aaKnown RBP17.74■□□□□ 0.43
CSNK1D-208ENST00000578501 MYL6BP14649 208 aa17.74■□□□□ 0.43
CSNK1D-208ENST00000578501 WWC1Q8IX03 1113 aa17.74■□□□□ 0.43
CSNK1D-208ENST00000578501 MAP3K15Q6ZN16 1313 aa17.73■□□□□ 0.43
CSNK1D-208ENST00000578501 KRT24Q2M2I5 525 aa17.73■□□□□ 0.43
CSNK1D-208ENST00000578501 KIF6Q6ZMV9 814 aa17.73■□□□□ 0.43
CSNK1D-208ENST00000578501 PDZRN3Q9UPQ7 1066 aa17.73■□□□□ 0.43
CSNK1D-208ENST00000578501 HLFQ16534 295 aa17.72■□□□□ 0.43
CSNK1D-208ENST00000578501 PRR5LQ6MZQ0 368 aa17.72■□□□□ 0.43
CSNK1D-208ENST00000578501 TTLL7Q6ZT98 887 aa17.72■□□□□ 0.43
CSNK1D-208ENST00000578501 NGEFQ8N5V2 710 aa17.72■□□□□ 0.43
CSNK1D-208ENST00000578501 BRIP1Q9BX63 1249 aa17.72■□□□□ 0.43
CSNK1D-208ENST00000578501 DDX21Q9NR30 783 aaKnown RBP eCLIP17.72■□□□□ 0.43
CSNK1D-208ENST00000578501 ARFGEF1Q9Y6D6 1849 aa17.72■□□□□ 0.43
CSNK1D-208ENST00000578501 HSPA1AP0DMV8 641 aaKnown RBP17.71■□□□□ 0.43
CSNK1D-208ENST00000578501 HSPA1BP0DMV9 641 aaKnown RBP17.71■□□□□ 0.43
CSNK1D-208ENST00000578501 DUSP27Q5VZP5 1158 aa17.71■□□□□ 0.43
CSNK1D-208ENST00000578501 CNBD1Q8NA66 436 aa17.71■□□□□ 0.43
CSNK1D-208ENST00000578501 NIP7Q9Y221 180 aaKnown RBP eCLIP17.71■□□□□ 0.43
CSNK1D-208ENST00000578501 BRCA1P38398 1863 aaKnown RBP17.71■□□□□ 0.43
CSNK1D-208ENST00000578501 IL16Q14005 1332 aa17.71■□□□□ 0.42
CSNK1D-208ENST00000578501 TNRC6CQ9HCJ0 1690 aaKnown RBP17.71■□□□□ 0.42
CSNK1D-208ENST00000578501 VEGFAP15692 232 aaPredicted RBP17.7■□□□□ 0.42
CSNK1D-208ENST00000578501 CHRNA5P30532 468 aa17.7■□□□□ 0.42
CSNK1D-208ENST00000578501 PROSER3Q2NL68 480 aa17.7■□□□□ 0.42
CSNK1D-208ENST00000578501 HDGFL1Q5TGJ6 251 aa17.7■□□□□ 0.42
CSNK1D-208ENST00000578501 PDE6BP35913 854 aa17.69■□□□□ 0.42
CSNK1D-208ENST00000578501 ST5P78524 1137 aa17.69■□□□□ 0.42
CSNK1D-208ENST00000578501 TPTE2Q6XPS3 522 aa17.69■□□□□ 0.42
CSNK1D-208ENST00000578501 NBPF5PQ86XG9 351 aaPredicted RBP17.69■□□□□ 0.42
CSNK1D-208ENST00000578501 FAM9BQ8IZU0 186 aa17.69■□□□□ 0.42
CSNK1D-208ENST00000578501 DBF4Q9UBU7 674 aaPredicted RBP17.69■□□□□ 0.42
CSNK1D-208ENST00000578501 H0YIN7 160 aa17.68■□□□□ 0.42
CSNK1D-208ENST00000578501 GIGYF2Q6Y7W6 1299 aaKnown RBP17.68■□□□□ 0.42
CSNK1D-208ENST00000578501 C2CD5Q86YS7 1000 aa17.68■□□□□ 0.42
CSNK1D-208ENST00000578501 WDR63Q8IWG1 891 aa17.68■□□□□ 0.42
CSNK1D-208ENST00000578501 NECTIN2Q92692 538 aa17.68■□□□□ 0.42
CSNK1D-208ENST00000578501 CHMP4AQ9BY43 222 aa17.68■□□□□ 0.42
CSNK1D-208ENST00000578501 CHPF2Q9P2E5 772 aa17.68■□□□□ 0.42
CSNK1D-208ENST00000578501 NPHP1O15259 732 aa17.67■□□□□ 0.42
CSNK1D-208ENST00000578501 ANXA1P04083 346 aa17.67■□□□□ 0.42
CSNK1D-208ENST00000578501 COPS6Q7L5N1 327 aa17.67■□□□□ 0.42
CSNK1D-208ENST00000578501 ZBTB3Q9H5J0 574 aa17.67■□□□□ 0.42
CSNK1D-208ENST00000578501 GLTPD2A6NH11 291 aa17.66■□□□□ 0.42
CSNK1D-208ENST00000578501 LMNB1P20700 586 aa17.66■□□□□ 0.42
CSNK1D-208ENST00000578501 ZNF34Q8IZ26 560 aa17.66■□□□□ 0.42
CSNK1D-208ENST00000578501 C8orf58Q8NAV2 365 aa17.66■□□□□ 0.42
CSNK1D-208ENST00000578501 XAGE3Q8WTP9 111 aa17.66■□□□□ 0.42
CSNK1D-208ENST00000578501 NYXQ9GZU5 481 aa17.66■□□□□ 0.42
CSNK1D-208ENST00000578501 HYPKQ9NX55 129 aa17.66■□□□□ 0.42
CSNK1D-208ENST00000578501 IBTKQ9P2D0 1353 aaPredicted RBP17.66■□□□□ 0.42
CSNK1D-208ENST00000578501 KLRG2A4D1S0 409 aaPredicted RBP17.65■□□□□ 0.42
CSNK1D-208ENST00000578501 CCER2I3L3R5 266 aa17.65■□□□□ 0.42
CSNK1D-208ENST00000578501 TTLL6Q8N841 843 aa17.65■□□□□ 0.42
CSNK1D-208ENST00000578501 NUP98P52948 1817 aa17.65■□□□□ 0.42
CSNK1D-208ENST00000578501 ANKRD31Q8N7Z5 1873 aa17.65■□□□□ 0.42
CSNK1D-208ENST00000578501 DLEC1Q9Y238 1755 aa17.64■□□□□ 0.41
CSNK1D-208ENST00000578501 HSP90AB3PQ58FF7 597 aa17.64■□□□□ 0.41
CSNK1D-208ENST00000578501 CCDC24Q8N4L8 307 aa17.64■□□□□ 0.41
CSNK1D-208ENST00000578501 TSR2Q969E8 191 aaKnown RBP17.64■□□□□ 0.41
CSNK1D-208ENST00000578501 UBN2Q6ZU65 1347 aa17.64■□□□□ 0.41
CSNK1D-208ENST00000578501 SRGNP10124 158 aa17.63■□□□□ 0.41
CSNK1D-208ENST00000578501 AIMP1Q12904 312 aaKnown RBP17.63■□□□□ 0.41
CSNK1D-208ENST00000578501 PARP10Q53GL7 1025 aa17.63■□□□□ 0.41
CSNK1D-208ENST00000578501 STYK1Q6J9G0 422 aa17.63■□□□□ 0.41
CSNK1D-208ENST00000578501 ELL2O00472 640 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms