RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 SOS1Q07889 1333 aaPredicted RBP12.07□□□□□ -0.48
PTPRM-205ENST00000577827 SKILP12757 684 aa12.07□□□□□ -0.48
PTPRM-205ENST00000577827 CCAR1Q8IX12 1150 aaKnown RBP12.07□□□□□ -0.48
PTPRM-205ENST00000577827 MYRIPQ8NFW9 859 aa12.07□□□□□ -0.48
PTPRM-205ENST00000577827 CD109Q6YHK3 1445 aa12.07□□□□□ -0.48
PTPRM-205ENST00000577827 KIF24Q5T7B8 1368 aa12.07□□□□□ -0.48
PTPRM-205ENST00000577827 ADGBQ8N7X0 1667 aa12.07□□□□□ -0.48
PTPRM-205ENST00000577827 TYRO3Q06418 890 aa12.07□□□□□ -0.48
PTPRM-205ENST00000577827 NEK1Q96PY6 1258 aa12.07□□□□□ -0.48
PTPRM-205ENST00000577827 FAM107BQ9H098 131 aa12.07□□□□□ -0.48
PTPRM-205ENST00000577827 POLKQ9UBT6 870 aa12.07□□□□□ -0.48
PTPRM-205ENST00000577827 DMRT2Q9Y5R5 561 aa12.07□□□□□ -0.48
PTPRM-205ENST00000577827 TTC41PQ6P2S7 1318 aa12.07□□□□□ -0.48
PTPRM-205ENST00000577827 GOLGA6L10A6NI86 522 aa12.07□□□□□ -0.48
PTPRM-205ENST00000577827 TMC6Q7Z403 805 aa12.07□□□□□ -0.48
PTPRM-205ENST00000577827 DACT1Q9NYF0 836 aa12.07□□□□□ -0.48
PTPRM-205ENST00000577827 CHMLP26374 656 aa12.06□□□□□ -0.48
PTPRM-205ENST00000577827 VPS53Q5VIR6 699 aa12.06□□□□□ -0.48
PTPRM-205ENST00000577827 TSHZ3Q63HK5 1081 aa12.06□□□□□ -0.48
PTPRM-205ENST00000577827 KIF6Q6ZMV9 814 aa12.06□□□□□ -0.48
PTPRM-205ENST00000577827 KDM5DQ9BY66 1539 aa12.06□□□□□ -0.48
PTPRM-205ENST00000577827 KIF20AO95235 890 aa12.06□□□□□ -0.48
PTPRM-205ENST00000577827 TRHP20396 242 aaPredicted RBP12.06□□□□□ -0.48
PTPRM-205ENST00000577827 CALRP27797 417 aaKnown RBP12.06□□□□□ -0.48
PTPRM-205ENST00000577827 EPS15P42566 896 aa12.06□□□□□ -0.48
PTPRM-205ENST00000577827 FKBP4Q02790 459 aaKnown RBP eCLIP12.06□□□□□ -0.48
PTPRM-205ENST00000577827 CCDC181Q5TID7 509 aa12.06□□□□□ -0.48
PTPRM-205ENST00000577827 THEMISQ8N1K5 641 aaPredicted RBP12.06□□□□□ -0.48
PTPRM-205ENST00000577827 CRACR2AQ9BSW2 395 aa12.06□□□□□ -0.48
PTPRM-205ENST00000577827 OGFRQ9NZT2 677 aa12.06□□□□□ -0.48
PTPRM-205ENST00000577827 SLU7O95391 586 aaKnown RBP12.06□□□□□ -0.48
PTPRM-205ENST00000577827 DNM1Q05193 864 aaKnown RBP12.06□□□□□ -0.48
PTPRM-205ENST00000577827 ZNF397Q8NF99 534 aaPredicted RBP12.06□□□□□ -0.48
PTPRM-205ENST00000577827 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.06□□□□□ -0.48
PTPRM-205ENST00000577827 ANTXR1Q9H6X2 564 aa12.06□□□□□ -0.48
PTPRM-205ENST00000577827 AKAP2Q9Y2D5 859 aa12.06□□□□□ -0.48
PTPRM-205ENST00000577827 MAGI3Q5TCQ9 1506 aa12.05□□□□□ -0.48
PTPRM-205ENST00000577827 RRP12Q5JTH9 1297 aaKnown RBP12.05□□□□□ -0.48
PTPRM-205ENST00000577827 TSPYL6Q8N831 410 aa12.05□□□□□ -0.48
PTPRM-205ENST00000577827 DDX54Q8TDD1 881 aaKnown RBP12.05□□□□□ -0.48
PTPRM-205ENST00000577827 CCDC8Q9H0W5 538 aaPredicted RBP12.05□□□□□ -0.48
PTPRM-205ENST00000577827 CNNM1Q9NRU3 951 aa12.05□□□□□ -0.48
PTPRM-205ENST00000577827 MAST1Q9Y2H9 1570 aa12.05□□□□□ -0.48
PTPRM-205ENST00000577827 IBTKQ9P2D0 1353 aaPredicted RBP12.05□□□□□ -0.48
PTPRM-205ENST00000577827 MYL6BP14649 208 aa12.05□□□□□ -0.48
PTPRM-205ENST00000577827 KIF4BQ2VIQ3 1234 aa12.05□□□□□ -0.48
PTPRM-205ENST00000577827 CCDC191Q8NCU4 936 aa12.05□□□□□ -0.48
PTPRM-205ENST00000577827 LARP6Q9BRS8 491 aaKnown RBP12.05□□□□□ -0.48
PTPRM-205ENST00000577827 AOX1Q06278 1338 aa12.05□□□□□ -0.48
PTPRM-205ENST00000577827 CCDC196A0A1B0GTZ2 297 aa12.04□□□□□ -0.48
PTPRM-205ENST00000577827 ESCO1Q5FWF5 840 aa12.04□□□□□ -0.48
PTPRM-205ENST00000577827 SBNO2Q9Y2G9 1366 aa12.04□□□□□ -0.48
PTPRM-205ENST00000577827 PHAXQ9H814 394 aaKnown RBP12.04□□□□□ -0.48
PTPRM-205ENST00000577827 RBM8AQ9Y5S9 174 aaKnown RBP12.04□□□□□ -0.48
PTPRM-205ENST00000577827 DISP1Q96F81 1524 aa12.04□□□□□ -0.48
PTPRM-205ENST00000577827 AK2P54819 239 aa12.04□□□□□ -0.48
PTPRM-205ENST00000577827 KCNG4Q8TDN1 519 aa12.04□□□□□ -0.48
PTPRM-205ENST00000577827 TRIM35Q9UPQ4 493 aa12.04□□□□□ -0.48
PTPRM-205ENST00000577827 TRAPPC8Q9Y2L5 1435 aa12.03□□□□□ -0.48
PTPRM-205ENST00000577827 ERLIN2O94905 339 aa12.03□□□□□ -0.48
PTPRM-205ENST00000577827 SYT1P21579 422 aa12.03□□□□□ -0.48
PTPRM-205ENST00000577827 CABP4P57796 275 aa12.03□□□□□ -0.48
PTPRM-205ENST00000577827 A0A1W2PP64 1363 aa12.03□□□□□ -0.48
PTPRM-205ENST00000577827 ALDH1L1O75891 902 aa12.03□□□□□ -0.48
PTPRM-205ENST00000577827 CNNM3Q8NE01 707 aa12.03□□□□□ -0.48
PTPRM-205ENST00000577827 RAD50Q92878 1312 aa12.03□□□□□ -0.48
PTPRM-205ENST00000577827 IFIT1P09914 478 aaKnown RBP12.03□□□□□ -0.48
PTPRM-205ENST00000577827 TUBB4BP68371 445 aa12.03□□□□□ -0.48
PTPRM-205ENST00000577827 UBAC1Q9BSL1 405 aa12.03□□□□□ -0.48
PTPRM-205ENST00000577827 PTPRTO14522 1441 aa12.03□□□□□ -0.48
PTPRM-205ENST00000577827 PI4KAP2A4QPH2 592 aa12.03□□□□□ -0.48
PTPRM-205ENST00000577827 POLR3GO15318 223 aaPredicted RBP12.03□□□□□ -0.48
PTPRM-205ENST00000577827 GTF2F1P35269 517 aaKnown RBP eCLIP12.03□□□□□ -0.48
PTPRM-205ENST00000577827 ATL3Q6DD88 541 aa12.03□□□□□ -0.48
PTPRM-205ENST00000577827 PI4KAP1Q8N8J0 262 aa12.03□□□□□ -0.48
PTPRM-205ENST00000577827 MRPS27Q92552 414 aaKnown RBP12.03□□□□□ -0.48
PTPRM-205ENST00000577827 GNL3LQ9NVN8 582 aaKnown RBP12.03□□□□□ -0.48
PTPRM-205ENST00000577827 KANK3Q6NY19 840 aa12.02□□□□□ -0.48
PTPRM-205ENST00000577827 NECAB1Q8N987 351 aa12.02□□□□□ -0.48
PTPRM-205ENST00000577827 CDK5RAP3Q96JB5 506 aa12.02□□□□□ -0.48
PTPRM-205ENST00000577827 ABCA5Q8WWZ7 1642 aa12.02□□□□□ -0.49
PTPRM-205ENST00000577827 KIAA1328Q86T90 577 aa12.02□□□□□ -0.49
PTPRM-205ENST00000577827 DNAJC25Q9H1X3 360 aa12.02□□□□□ -0.49
PTPRM-205ENST00000577827 SHTN1A0MZ66 631 aa12.02□□□□□ -0.49
PTPRM-205ENST00000577827 BRD1O95696 1058 aa12.02□□□□□ -0.49
PTPRM-205ENST00000577827 PTGS1P23219 599 aa12.01□□□□□ -0.49
PTPRM-205ENST00000577827 ARFGAP3Q9NP61 516 aa12.01□□□□□ -0.49
PTPRM-205ENST00000577827 TTC21AQ8NDW8 1320 aa12.01□□□□□ -0.49
PTPRM-205ENST00000577827 G3V3G9 751 aa12.01□□□□□ -0.49
PTPRM-205ENST00000577827 ATF3P18847 181 aa12.01□□□□□ -0.49
PTPRM-205ENST00000577827 DCAF8Q5TAQ9 597 aa12.01□□□□□ -0.49
PTPRM-205ENST00000577827 CCDC102BQ68D86 513 aa12.01□□□□□ -0.49
PTPRM-205ENST00000577827 GUCY1B3Q02153 619 aa12.01□□□□□ -0.49
PTPRM-205ENST00000577827 MBD5Q9P267 1494 aa12.01□□□□□ -0.49
PTPRM-205ENST00000577827 GOLGA8BA8MQT2 603 aa12.01□□□□□ -0.49
PTPRM-205ENST00000577827 NUP133Q8WUM0 1156 aa12.01□□□□□ -0.49
PTPRM-205ENST00000577827 EIF5P55010 431 aaKnown RBP12□□□□□ -0.49
PTPRM-205ENST00000577827 GABPB1Q06547 395 aaPredicted RBP12□□□□□ -0.49
PTPRM-205ENST00000577827 PHACTR3Q96KR7 559 aa12□□□□□ -0.49
PTPRM-205ENST00000577827 ORC3Q9UBD5 711 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms