RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 MON2Q7Z3U7 1717 aa9.56□□□□□ -0.88
SMARCE1-212ENST00000577721 KAT6BQ8WYB5 2073 aa9.56□□□□□ -0.88
SMARCE1-212ENST00000577721 PALLDQ8WX93 1383 aa9.56□□□□□ -0.88
SMARCE1-212ENST00000577721 PPM1GO15355 546 aaPredicted RBP9.56□□□□□ -0.88
SMARCE1-212ENST00000577721 GGCXP38435 758 aa9.56□□□□□ -0.88
SMARCE1-212ENST00000577721 HSP90AB2PQ58FF8 381 aa9.56□□□□□ -0.88
SMARCE1-212ENST00000577721 SMIM5Q71RC9 77 aa9.56□□□□□ -0.88
SMARCE1-212ENST00000577721 DDX27Q96GQ7 796 aaKnown RBP9.56□□□□□ -0.88
SMARCE1-212ENST00000577721 TESK2Q96S53 571 aa9.56□□□□□ -0.88
SMARCE1-212ENST00000577721 MEGF6O75095 1541 aa9.56□□□□□ -0.88
SMARCE1-212ENST00000577721 TMF1P82094 1093 aa9.55□□□□□ -0.88
SMARCE1-212ENST00000577721 PKDCCQ504Y2 493 aa9.55□□□□□ -0.88
SMARCE1-212ENST00000577721 IGSF1Q8N6C5 1336 aa9.55□□□□□ -0.88
SMARCE1-212ENST00000577721 RTL1A6NKG5 1358 aa9.54□□□□□ -0.88
SMARCE1-212ENST00000577721 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.54□□□□□ -0.88
SMARCE1-212ENST00000577721 CYP27B1O15528 508 aa9.54□□□□□ -0.88
SMARCE1-212ENST00000577721 HSPA6P17066 643 aa9.54□□□□□ -0.88
SMARCE1-212ENST00000577721 PACS2Q86VP3 889 aa9.54□□□□□ -0.88
SMARCE1-212ENST00000577721 PIGBQ92521 554 aa9.54□□□□□ -0.88
SMARCE1-212ENST00000577721 EPAS1Q99814 870 aa9.54□□□□□ -0.88
SMARCE1-212ENST00000577721 LARP6Q9BRS8 491 aaKnown RBP9.54□□□□□ -0.88
SMARCE1-212ENST00000577721 SPG7Q9UQ90 795 aa9.54□□□□□ -0.88
SMARCE1-212ENST00000577721 LTN1O94822 1766 aa9.54□□□□□ -0.88
SMARCE1-212ENST00000577721 CHD4Q14839 1912 aa9.54□□□□□ -0.88
SMARCE1-212ENST00000577721 INSRP06213 1382 aa9.52□□□□□ -0.88
SMARCE1-212ENST00000577721 LOC102724428A0A0B4J2F2 783 aa9.52□□□□□ -0.89
SMARCE1-212ENST00000577721 SSFA2P28290 1259 aa9.52□□□□□ -0.89
SMARCE1-212ENST00000577721 ATP6V1AP38606 617 aa9.52□□□□□ -0.89
SMARCE1-212ENST00000577721 SIK1P57059 783 aa9.52□□□□□ -0.89
SMARCE1-212ENST00000577721 CDCA8Q53HL2 280 aa9.52□□□□□ -0.89
SMARCE1-212ENST00000577721 TMOD3Q9NYL9 352 aa9.52□□□□□ -0.89
SMARCE1-212ENST00000577721 USP54Q70EL1 1684 aa9.51□□□□□ -0.89
SMARCE1-212ENST00000577721 UTRNP46939 3433 aa9.51□□□□□ -0.89
SMARCE1-212ENST00000577721 GNPATO15228 680 aa9.51□□□□□ -0.89
SMARCE1-212ENST00000577721 TREML4Q6UXN2 200 aa9.51□□□□□ -0.89
SMARCE1-212ENST00000577721 AMIGO3Q86WK7 504 aa9.51□□□□□ -0.89
SMARCE1-212ENST00000577721 LINC00116Q8NCU8 138 aa9.51□□□□□ -0.89
SMARCE1-212ENST00000577721 ASAP1Q9ULH1 1129 aa9.51□□□□□ -0.89
SMARCE1-212ENST00000577721 EMILIN1Q9Y6C2 1016 aa9.51□□□□□ -0.89
SMARCE1-212ENST00000577721 SHANK3Q9BYB0 1731 aa9.51□□□□□ -0.89
SMARCE1-212ENST00000577721 FLT4P35916 1363 aa9.5□□□□□ -0.89
SMARCE1-212ENST00000577721 NSD3Q9BZ95 1437 aa9.5□□□□□ -0.89
SMARCE1-212ENST00000577721 MMP10P09238 476 aa9.5□□□□□ -0.89
SMARCE1-212ENST00000577721 ARHGAP27Q6ZUM4 889 aa9.5□□□□□ -0.89
SMARCE1-212ENST00000577721 BCS1LQ9Y276 419 aa9.5□□□□□ -0.89
SMARCE1-212ENST00000577721 DOT1LQ8TEK3 1739 aa9.5□□□□□ -0.89
SMARCE1-212ENST00000577721 DGAT1O75907 488 aa9.49□□□□□ -0.89
SMARCE1-212ENST00000577721 ITPK1Q13572 414 aa9.49□□□□□ -0.89
SMARCE1-212ENST00000577721 NKX1-1Q15270 411 aaPredicted RBP9.49□□□□□ -0.89
SMARCE1-212ENST00000577721 TRAPPC3LQ5T215 181 aa9.49□□□□□ -0.89
SMARCE1-212ENST00000577721 IFNL2Q8IZJ0 200 aa9.49□□□□□ -0.89
SMARCE1-212ENST00000577721 RTCBQ9Y3I0 505 aaKnown RBP9.49□□□□□ -0.89
SMARCE1-212ENST00000577721 FAM208AQ9UK61 1670 aaKnown RBP9.48□□□□□ -0.89
SMARCE1-212ENST00000577721 QSER1Q2KHR3 1735 aa9.48□□□□□ -0.89
SMARCE1-212ENST00000577721 A0A0G2JLW4 131 aa9.48□□□□□ -0.89
SMARCE1-212ENST00000577721 SAMD7Q7Z3H4 446 aa9.48□□□□□ -0.89
SMARCE1-212ENST00000577721 NLGN1Q8N2Q7 840 aa9.48□□□□□ -0.89
SMARCE1-212ENST00000577721 ZNF516Q92618 1163 aa9.48□□□□□ -0.89
SMARCE1-212ENST00000577721 EYA1Q99502 592 aa9.48□□□□□ -0.89
SMARCE1-212ENST00000577721 POLR3GLQ9BT43 218 aa9.48□□□□□ -0.89
SMARCE1-212ENST00000577721 CARD14Q9BXL6 1004 aa9.48□□□□□ -0.89
SMARCE1-212ENST00000577721 EMILIN3Q9NT22 766 aa9.48□□□□□ -0.89
SMARCE1-212ENST00000577721 ATG3Q9NT62 314 aa9.48□□□□□ -0.89
SMARCE1-212ENST00000577721 KIF24Q5T7B8 1368 aa9.48□□□□□ -0.89
SMARCE1-212ENST00000577721 LY75O60449 1722 aa9.48□□□□□ -0.89
SMARCE1-212ENST00000577721 FCHSD2O94868 740 aa9.47□□□□□ -0.89
SMARCE1-212ENST00000577721 PHKG2P15735 406 aa9.47□□□□□ -0.89
SMARCE1-212ENST00000577721 RFC4P35249 363 aa9.47□□□□□ -0.89
SMARCE1-212ENST00000577721 TNNT2P45379 298 aaPredicted RBP9.47□□□□□ -0.89
SMARCE1-212ENST00000577721 APLP1P51693 650 aa9.47□□□□□ -0.89
SMARCE1-212ENST00000577721 TGFB2P61812 414 aa9.47□□□□□ -0.89
SMARCE1-212ENST00000577721 TMUB1Q9BVT8 246 aa9.47□□□□□ -0.89
SMARCE1-212ENST00000577721 CCDC87Q9NVE4 849 aa9.47□□□□□ -0.89
SMARCE1-212ENST00000577721 ADCY9O60503 1353 aa9.47□□□□□ -0.89
SMARCE1-212ENST00000577721 COL24A1Q17RW2 1714 aa9.46□□□□□ -0.89
SMARCE1-212ENST00000577721 POTECB2RU33 542 aa9.46□□□□□ -0.9
SMARCE1-212ENST00000577721 TOMM70O94826 608 aa9.46□□□□□ -0.9
SMARCE1-212ENST00000577721 C16orf71Q8IYS4 520 aaPredicted RBP9.46□□□□□ -0.9
SMARCE1-212ENST00000577721 ARHGEF1Q92888 912 aaKnown RBP9.46□□□□□ -0.9
SMARCE1-212ENST00000577721 PARP3Q9Y6F1 533 aa9.46□□□□□ -0.9
SMARCE1-212ENST00000577721 WASHC2AQ641Q2 1341 aa9.46□□□□□ -0.9
SMARCE1-212ENST00000577721 TUBGCP6Q96RT7 1819 aa9.45□□□□□ -0.9
SMARCE1-212ENST00000577721 DPEP1P16444 411 aa9.45□□□□□ -0.9
SMARCE1-212ENST00000577721 RGPD2P0DJD1 1756 aa9.45□□□□□ -0.9
SMARCE1-212ENST00000577721 HSP90AB1P08238 724 aaKnown RBP9.44□□□□□ -0.9
SMARCE1-212ENST00000577721 CABP4P57796 275 aa9.44□□□□□ -0.9
SMARCE1-212ENST00000577721 PLEKHO1Q53GL0 409 aaPredicted RBP9.44□□□□□ -0.9
SMARCE1-212ENST00000577721 NMRK2Q9NPI5 230 aa9.44□□□□□ -0.9
SMARCE1-212ENST00000577721 POLKQ9UBT6 870 aa9.44□□□□□ -0.9
SMARCE1-212ENST00000577721 C4BP0C0L5 1744 aa9.43□□□□□ -0.9
SMARCE1-212ENST00000577721 C5P01031 1676 aa9.43□□□□□ -0.9
SMARCE1-212ENST00000577721 ERVV-2B6SEH9 535 aa9.43□□□□□ -0.9
SMARCE1-212ENST00000577721 RPS6KA4O75676 772 aa9.43□□□□□ -0.9
SMARCE1-212ENST00000577721 EIF4A2Q14240 407 aaKnown RBP9.43□□□□□ -0.9
SMARCE1-212ENST00000577721 MFSD10Q14728 455 aa9.43□□□□□ -0.9
SMARCE1-212ENST00000577721 RC3H1Q5TC82 1133 aaKnown RBP9.43□□□□□ -0.9
SMARCE1-212ENST00000577721 C9orf131Q5VYM1 1079 aa9.43□□□□□ -0.9
SMARCE1-212ENST00000577721 NKX2-3Q8TAU0 364 aa9.43□□□□□ -0.9
SMARCE1-212ENST00000577721 STK17AQ9UEE5 414 aa9.43□□□□□ -0.9
SMARCE1-212ENST00000577721 TSKSQ9UJT2 592 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms