RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 POTEJP0CG39 1038 aa16.11■□□□□ 0.17
PRPF8-215ENST00000576958 CNBD1Q8NA66 436 aa16.11■□□□□ 0.17
PRPF8-215ENST00000576958 CFAP53Q96M91 514 aa16.11■□□□□ 0.17
PRPF8-215ENST00000576958 HLFQ16534 295 aa16.1■□□□□ 0.17
PRPF8-215ENST00000576958 SETDB2Q96T68 719 aa16.1■□□□□ 0.17
PRPF8-215ENST00000576958 TEX13AQ9BXU3 409 aaPredicted RBP16.1■□□□□ 0.17
PRPF8-215ENST00000576958 SRGNP10124 158 aa16.09■□□□□ 0.17
PRPF8-215ENST00000576958 PRPF40BQ6NWY9 871 aaKnown RBP16.09■□□□□ 0.17
PRPF8-215ENST00000576958 KLRG1Q96E93 195 aa16.09■□□□□ 0.17
PRPF8-215ENST00000576958 DICER1Q9UPY3 1922 aaKnown RBP16.09■□□□□ 0.17
PRPF8-215ENST00000576958 ARFGEF2Q9Y6D5 1785 aa16.08■□□□□ 0.17
PRPF8-215ENST00000576958 PDE6BP35913 854 aa16.08■□□□□ 0.16
PRPF8-215ENST00000576958 FSTL1Q12841 308 aa16.08■□□□□ 0.16
PRPF8-215ENST00000576958 NGEFQ8N5V2 710 aa16.08■□□□□ 0.16
PRPF8-215ENST00000576958 DDNO94850 711 aaPredicted RBP16.07■□□□□ 0.16
PRPF8-215ENST00000576958 SNRPA1P09661 255 aaKnown RBP16.07■□□□□ 0.16
PRPF8-215ENST00000576958 SMC1BQ8NDV3 1235 aa16.07■□□□□ 0.16
PRPF8-215ENST00000576958 KDM3BQ7LBC6 1761 aa16.07■□□□□ 0.16
PRPF8-215ENST00000576958 LAMB4A4D0S4 1761 aa16.06■□□□□ 0.16
PRPF8-215ENST00000576958 ABCC12Q96J65 1359 aa16.06■□□□□ 0.16
PRPF8-215ENST00000576958 NPHP1O15259 732 aa16.06■□□□□ 0.16
PRPF8-215ENST00000576958 VEGFAP15692 232 aaPredicted RBP16.06■□□□□ 0.16
PRPF8-215ENST00000576958 ERFEQ4G0M1 354 aa16.06■□□□□ 0.16
PRPF8-215ENST00000576958 COL13A1Q5TAT6 717 aaPredicted RBP16.06■□□□□ 0.16
PRPF8-215ENST00000576958 NBPF5PQ86XG9 351 aaPredicted RBP16.06■□□□□ 0.16
PRPF8-215ENST00000576958 C7orf43Q8WVR3 580 aa16.06■□□□□ 0.16
PRPF8-215ENST00000576958 RTF1Q92541 710 aaKnown RBP16.06■□□□□ 0.16
PRPF8-215ENST00000576958 NUDCQ9Y266 331 aa16.06■□□□□ 0.16
PRPF8-215ENST00000576958 ST5P78524 1137 aa16.05■□□□□ 0.16
PRPF8-215ENST00000576958 PLEKHF1Q96S99 279 aa16.05■□□□□ 0.16
PRPF8-215ENST00000576958 TAOK3Q9H2K8 898 aa16.05■□□□□ 0.16
PRPF8-215ENST00000576958 NIP7Q9Y221 180 aaKnown RBP eCLIP16.05■□□□□ 0.16
PRPF8-215ENST00000576958 ZC3H4Q9UPT8 1303 aaKnown RBP16.04■□□□□ 0.16
PRPF8-215ENST00000576958 STYK1Q6J9G0 422 aa16.04■□□□□ 0.16
PRPF8-215ENST00000576958 TTLL7Q6ZT98 887 aa16.04■□□□□ 0.16
PRPF8-215ENST00000576958 NUTM1Q86Y26 1132 aa16.04■□□□□ 0.16
PRPF8-215ENST00000576958 JMYQ8N9B5 988 aa16.04■□□□□ 0.16
PRPF8-215ENST00000576958 MASTLQ96GX5 879 aa16.04■□□□□ 0.16
PRPF8-215ENST00000576958 ZNF541Q9H0D2 1346 aa16.03■□□□□ 0.16
PRPF8-215ENST00000576958 COL4A5P29400 1685 aa16.03■□□□□ 0.16
PRPF8-215ENST00000576958 ZNF277Q9NRM2 450 aaPredicted RBP16.03■□□□□ 0.16
PRPF8-215ENST00000576958 TAF7Q15545 349 aaPredicted RBP16.02■□□□□ 0.16
PRPF8-215ENST00000576958 C3orf67Q6ZVT6 689 aa16.02■□□□□ 0.16
PRPF8-215ENST00000576958 NPM2Q86SE8 214 aaKnown RBP16.02■□□□□ 0.16
PRPF8-215ENST00000576958 CNKSR1Q969H4 720 aa16.02■□□□□ 0.16
PRPF8-215ENST00000576958 NUP98P52948 1817 aa16.01■□□□□ 0.15
PRPF8-215ENST00000576958 MYL6BP14649 208 aa16.01■□□□□ 0.15
PRPF8-215ENST00000576958 RRP7AQ9Y3A4 280 aaKnown RBP16.01■□□□□ 0.15
PRPF8-215ENST00000576958 UBN2Q6ZU65 1347 aa16■□□□□ 0.15
PRPF8-215ENST00000576958 LTBP3Q9NS15 1303 aa16■□□□□ 0.15
PRPF8-215ENST00000576958 KLRG2A4D1S0 409 aaPredicted RBP16■□□□□ 0.15
PRPF8-215ENST00000576958 GPTP24298 496 aa16■□□□□ 0.15
PRPF8-215ENST00000576958 EIF4A1P60842 406 aaKnown RBP16■□□□□ 0.15
PRPF8-215ENST00000576958 ZNF428Q96B54 188 aa16■□□□□ 0.15
PRPF8-215ENST00000576958 ZBTB3Q9H5J0 574 aa16■□□□□ 0.15
PRPF8-215ENST00000576958 HTATSF1O43719 755 aaKnown RBP15.99■□□□□ 0.15
PRPF8-215ENST00000576958 ANXA1P04083 346 aa15.99■□□□□ 0.15
PRPF8-215ENST00000576958 CLEC4GQ6UXB4 293 aa15.99■□□□□ 0.15
PRPF8-215ENST00000576958 SNED1Q8TER0 1413 aa15.99■□□□□ 0.15
PRPF8-215ENST00000576958 NPR1P16066 1061 aa15.98■□□□□ 0.15
PRPF8-215ENST00000576958 NFE2L2Q16236 605 aa15.98■□□□□ 0.15
PRPF8-215ENST00000576958 PROSER3Q2NL68 480 aa15.98■□□□□ 0.15
PRPF8-215ENST00000576958 DPY19L2Q6NUT2 758 aa15.98■□□□□ 0.15
PRPF8-215ENST00000576958 ZNF652Q9Y2D9 606 aa15.98■□□□□ 0.15
PRPF8-215ENST00000576958 TCERG1O14776 1098 aaKnown RBP15.97■□□□□ 0.15
PRPF8-215ENST00000576958 CAPN15O75808 1086 aa15.97■□□□□ 0.15
PRPF8-215ENST00000576958 CCDC93Q567U6 631 aa15.97■□□□□ 0.15
PRPF8-215ENST00000576958 MKRN1Q9UHC7 482 aaKnown RBP15.97■□□□□ 0.15
PRPF8-215ENST00000576958 PDZRN3Q9UPQ7 1066 aa15.97■□□□□ 0.15
PRPF8-215ENST00000576958 HSPA1AP0DMV8 641 aaKnown RBP15.96■□□□□ 0.15
PRPF8-215ENST00000576958 HSPA1BP0DMV9 641 aaKnown RBP15.96■□□□□ 0.15
PRPF8-215ENST00000576958 FKBP4Q02790 459 aaKnown RBP eCLIP15.96■□□□□ 0.15
PRPF8-215ENST00000576958 SUSD4Q5VX71 490 aa15.96■□□□□ 0.15
PRPF8-215ENST00000576958 CHADLQ6NUI6 762 aa15.96■□□□□ 0.15
PRPF8-215ENST00000576958 TPTE2Q6XPS3 522 aa15.96■□□□□ 0.15
PRPF8-215ENST00000576958 LTBP1Q14766 1721 aa15.96■□□□□ 0.15
PRPF8-215ENST00000576958 MAP3K15Q6ZN16 1313 aa15.95■□□□□ 0.14
PRPF8-215ENST00000576958 KRT24Q2M2I5 525 aa15.95■□□□□ 0.14
PRPF8-215ENST00000576958 LRP10Q7Z4F1 713 aa15.95■□□□□ 0.14
PRPF8-215ENST00000576958 NECTIN2Q92692 538 aa15.95■□□□□ 0.14
PRPF8-215ENST00000576958 TAF1DQ9H5J8 278 aaPredicted RBP15.95■□□□□ 0.14
PRPF8-215ENST00000576958 RNF123Q5XPI4 1314 aa15.94■□□□□ 0.14
PRPF8-215ENST00000576958 PDIA6Q15084 440 aa15.94■□□□□ 0.14
PRPF8-215ENST00000576958 SYNE4Q8N205 404 aa15.94■□□□□ 0.14
PRPF8-215ENST00000576958 ADAMTSL1Q8N6G6 1762 aa15.94■□□□□ 0.14
PRPF8-215ENST00000576958 GTF2E1P29083 439 aaPredicted RBP15.93■□□□□ 0.14
PRPF8-215ENST00000576958 FMR1Q06787 632 aaKnown RBP eCLIP15.93■□□□□ 0.141e-10■■□□□ 13.2
PRPF8-215ENST00000576958 CRY2Q49AN0 593 aa15.93■□□□□ 0.14
PRPF8-215ENST00000576958 EAPPQ56P03 285 aaPredicted RBP15.93■□□□□ 0.14
PRPF8-215ENST00000576958 CCDC146Q8IYE0 955 aa15.93■□□□□ 0.14
PRPF8-215ENST00000576958 NTSR2O95665 410 aa15.92■□□□□ 0.14
PRPF8-215ENST00000576958 EIF2S2P20042 333 aaKnown RBP15.92■□□□□ 0.14
PRPF8-215ENST00000576958 IARSP41252 1262 aaKnown RBP15.92■□□□□ 0.14
PRPF8-215ENST00000576958 ZNF34Q8IZ26 560 aa15.92■□□□□ 0.14
PRPF8-215ENST00000576958 L3MBTL3Q96JM7 780 aaPredicted RBP15.92■□□□□ 0.14
PRPF8-215ENST00000576958 PASKQ96RG2 1323 aa15.92■□□□□ 0.14
PRPF8-215ENST00000576958 SCN4AP35499 1836 aa15.91■□□□□ 0.14
PRPF8-215ENST00000576958 SOGA3Q5TF21 947 aa15.91■□□□□ 0.14
PRPF8-215ENST00000576958 TSPYL4Q9UJ04 414 aa15.91■□□□□ 0.14
PRPF8-215ENST00000576958 COL4A1P02462 1669 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms