RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 WDR17Q8IZU2 1322 aa8.82□□□□□ -1
NUP88-212ENST00000576708 TTC21AQ8NDW8 1320 aa8.82□□□□□ -1
NUP88-212ENST00000576708 RGPD5Q99666 1765 aa8.82□□□□□ -1
NUP88-212ENST00000576708 CSB-PGBD3P0DP91 1061 aa8.82□□□□□ -1
NUP88-212ENST00000576708 SKIV2LQ15477 1246 aaKnown RBP8.82□□□□□ -1
NUP88-212ENST00000576708 DIXDC1Q155Q3 683 aa8.82□□□□□ -1
NUP88-212ENST00000576708 DDB1Q16531 1140 aa8.82□□□□□ -1
NUP88-212ENST00000576708 CSPP1Q1MSJ5 1256 aa8.82□□□□□ -1
NUP88-212ENST00000576708 MARCH10Q8NA82 808 aaPredicted RBP8.82□□□□□ -1
NUP88-212ENST00000576708 PARP4Q9UKK3 1724 aaKnown RBP8.82□□□□□ -1
NUP88-212ENST00000576708 CD163L1Q9NR16 1453 aa8.82□□□□□ -1
NUP88-212ENST00000576708 NFAT5O94916 1531 aa8.81□□□□□ -1
NUP88-212ENST00000576708 ATP6V1AP38606 617 aa8.81□□□□□ -1
NUP88-212ENST00000576708 CLK2P49760 499 aaKnown RBP8.81□□□□□ -1
NUP88-212ENST00000576708 USP46P62068 366 aa8.81□□□□□ -1
NUP88-212ENST00000576708 RSBN1LQ6PCB5 846 aaPredicted RBP8.81□□□□□ -1
NUP88-212ENST00000576708 KCNH5Q8NCM2 988 aa8.81□□□□□ -1
NUP88-212ENST00000576708 PRR14Q9BWN1 585 aa8.81□□□□□ -1
NUP88-212ENST00000576708 PCDHB3Q9Y5E6 796 aa8.81□□□□□ -1
NUP88-212ENST00000576708 TONSLQ96HA7 1378 aa8.81□□□□□ -1
NUP88-212ENST00000576708 LRRC37A3O60309 1634 aa8.8□□□□□ -1
NUP88-212ENST00000576708 PEAK1Q9H792 1746 aa8.8□□□□□ -1
NUP88-212ENST00000576708 COPS2P61201 443 aa8.8□□□□□ -1
NUP88-212ENST00000576708 BLOC1S3Q6QNY0 202 aa8.8□□□□□ -1
NUP88-212ENST00000576708 PCMTD1Q96MG8 357 aaPredicted RBP8.8□□□□□ -1
NUP88-212ENST00000576708 CARD10Q9BWT7 1032 aa8.8□□□□□ -1
NUP88-212ENST00000576708 PLA2G2EQ9NZK7 142 aa8.8□□□□□ -1
NUP88-212ENST00000576708 PCDHB15Q9Y5E8 787 aa8.8□□□□□ -1
NUP88-212ENST00000576708 SBNO2Q9Y2G9 1366 aa8.8□□□□□ -1
NUP88-212ENST00000576708 RREB1Q92766 1687 aa8.8□□□□□ -1
NUP88-212ENST00000576708 NUP188Q5SRE5 1749 aa8.8□□□□□ -1
NUP88-212ENST00000576708 MON2Q7Z3U7 1717 aa8.8□□□□□ -1
NUP88-212ENST00000576708 OVOS2A0A0G2JMS6 1433 aa8.8□□□□□ -1
NUP88-212ENST00000576708 OVOS2A0A0J9YW53 1432 aa8.8□□□□□ -1
NUP88-212ENST00000576708 OVOS2Q6IE36 1432 aa8.8□□□□□ -1
NUP88-212ENST00000576708 USP31Q70CQ4 1352 aa8.79□□□□□ -1
NUP88-212ENST00000576708 PARD3Q8TEW0 1356 aa8.79□□□□□ -1
NUP88-212ENST00000576708 SPTLC1O15269 473 aa8.79□□□□□ -1
NUP88-212ENST00000576708 FDX1P10109 184 aa8.79□□□□□ -1
NUP88-212ENST00000576708 GRIPAP1Q4V328 841 aa8.79□□□□□ -1
NUP88-212ENST00000576708 MORN1Q5T089 497 aa8.79□□□□□ -1
NUP88-212ENST00000576708 PCDHGC3Q9UN70 934 aa8.79□□□□□ -1
NUP88-212ENST00000576708 ST20-MTHFSA0A0A6YYL1 179 aa8.78□□□□□ -1
NUP88-212ENST00000576708 FBLN1P23142 703 aa8.78□□□□□ -1
NUP88-212ENST00000576708 NBPF14Q5TI25 921 aa8.78□□□□□ -1
NUP88-212ENST00000576708 HDGFL2Q7Z4V5 671 aaPredicted RBP8.78□□□□□ -1
NUP88-212ENST00000576708 SLC27A5Q9Y2P5 690 aa8.78□□□□□ -1
NUP88-212ENST00000576708 WNK3Q9BYP7 1800 aa8.77□□□□□ -1
NUP88-212ENST00000576708 A0A1W2PP64 1363 aa8.77□□□□□ -1.01
NUP88-212ENST00000576708 EXOC5O00471 708 aa8.77□□□□□ -1.01
NUP88-212ENST00000576708 KCNQ2O43526 872 aa8.77□□□□□ -1.01
NUP88-212ENST00000576708 ANKRD24Q8TF21 1146 aa8.77□□□□□ -1.01
NUP88-212ENST00000576708 SYMPKQ92797 1274 aaKnown RBP8.77□□□□□ -1.01
NUP88-212ENST00000576708 TESK2Q96S53 571 aa8.77□□□□□ -1.01
NUP88-212ENST00000576708 PDGFDQ9GZP0 370 aaPredicted RBP8.77□□□□□ -1.01
NUP88-212ENST00000576708 GOPCQ9HD26 462 aa8.77□□□□□ -1.01
NUP88-212ENST00000576708 NLRP2Q9NX02 1062 aa8.77□□□□□ -1.01
NUP88-212ENST00000576708 HCSTQ9UBK5 93 aa8.77□□□□□ -1.01
NUP88-212ENST00000576708 SBF2Q86WG5 1849 aa8.77□□□□□ -1.01
NUP88-212ENST00000576708 PLSCR1O15162 318 aa8.76□□□□□ -1.01
NUP88-212ENST00000576708 QPCTQ16769 361 aa8.76□□□□□ -1.01
NUP88-212ENST00000576708 NYAP1Q6ZVC0 841 aa8.76□□□□□ -1.01
NUP88-212ENST00000576708 LTV1Q96GA3 475 aaPredicted RBP8.76□□□□□ -1.01
NUP88-212ENST00000576708 ACSBG1Q96GR2 724 aa8.76□□□□□ -1.01
NUP88-212ENST00000576708 MTRQ99707 1265 aa8.76□□□□□ -1.01
NUP88-212ENST00000576708 CDCA7Q9BWT1 371 aaPredicted RBP8.76□□□□□ -1.01
NUP88-212ENST00000576708 TERF2IPQ9NYB0 399 aa8.76□□□□□ -1.01
NUP88-212ENST00000576708 CCDC7Q96M83 1385 aa8.75□□□□□ -1.01
NUP88-212ENST00000576708 EDC4Q6P2E9 1401 aaKnown RBP8.75□□□□□ -1.01
NUP88-212ENST00000576708 TRIM26Q12899 539 aaPredicted RBP8.75□□□□□ -1.01
NUP88-212ENST00000576708 SCUBE3Q8IX30 993 aa8.75□□□□□ -1.01
NUP88-212ENST00000576708 LTN1O94822 1766 aa8.74□□□□□ -1.01
NUP88-212ENST00000576708 C11orf95C9JLR9 678 aaPredicted RBP8.74□□□□□ -1.01
NUP88-212ENST00000576708 C6orf229H3BNL8 230 aa8.74□□□□□ -1.01
NUP88-212ENST00000576708 NR1I2O75469 434 aa8.74□□□□□ -1.01
NUP88-212ENST00000576708 RNF19BQ6ZMZ0 732 aa8.74□□□□□ -1.01
NUP88-212ENST00000576708 ZNF516Q92618 1163 aa8.74□□□□□ -1.01
NUP88-212ENST00000576708 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.74□□□□□ -1.01
NUP88-212ENST00000576708 USP54Q70EL1 1684 aa8.74□□□□□ -1.01
NUP88-212ENST00000576708 BCL9O00512 1426 aa8.73□□□□□ -1.01
NUP88-212ENST00000576708 TNS2Q63HR2 1409 aa8.73□□□□□ -1.01
NUP88-212ENST00000576708 ZBTB7AO95365 584 aa8.73□□□□□ -1.01
NUP88-212ENST00000576708 IL2RBP14784 551 aa8.73□□□□□ -1.01
NUP88-212ENST00000576708 TXNRD1Q16881 649 aa8.73□□□□□ -1.01
NUP88-212ENST00000576708 TJAP1Q5JTD0 557 aa8.73□□□□□ -1.01
NUP88-212ENST00000576708 IP6K1Q92551 441 aa8.73□□□□□ -1.01
NUP88-212ENST00000576708 PUS7Q96PZ0 661 aaKnown RBP8.73□□□□□ -1.01
NUP88-212ENST00000576708 SPON1Q9HCB6 807 aa8.73□□□□□ -1.01
NUP88-212ENST00000576708 ABCC6O95255 1503 aa8.73□□□□□ -1.01
NUP88-212ENST00000576708 MAP3K19Q56UN5 1328 aa8.73□□□□□ -1.01
NUP88-212ENST00000576708 TLL1O43897 1013 aa8.72□□□□□ -1.01
NUP88-212ENST00000576708 LILRB3O75022 631 aa8.72□□□□□ -1.01
NUP88-212ENST00000576708 GJA5P36382 358 aa8.72□□□□□ -1.01
NUP88-212ENST00000576708 RTL5Q5HYW3 569 aaPredicted RBP8.72□□□□□ -1.01
NUP88-212ENST00000576708 DDX54Q8TDD1 881 aaKnown RBP8.72□□□□□ -1.01
NUP88-212ENST00000576708 PPP1R1BQ9UD71 204 aaPredicted RBP8.72□□□□□ -1.01
NUP88-212ENST00000576708 RRS1Q15050 365 aaKnown RBP8.71□□□□□ -1.02
NUP88-212ENST00000576708 COG3Q96JB2 828 aa8.71□□□□□ -1.02
NUP88-212ENST00000576708 GGNBP2Q9H3C7 697 aa8.71□□□□□ -1.02
NUP88-212ENST00000576708 ZBTB3Q9H5J0 574 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms