RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 SERPINB2P05120 415 aa17.54■□□□□ 0.4
RPAIN-213ENST00000573577 ZNF652Q9Y2D9 606 aa17.54■□□□□ 0.4
RPAIN-213ENST00000573577 NRXN2Q9P2S2 1712 aa17.54■□□□□ 0.4
RPAIN-213ENST00000573577 CARMIL3Q8ND23 1372 aa17.53■□□□□ 0.4
RPAIN-213ENST00000573577 RGL2O15211 777 aa17.53■□□□□ 0.4
RPAIN-213ENST00000573577 MYL6BP14649 208 aa17.53■□□□□ 0.4
RPAIN-213ENST00000573577 KRT24Q2M2I5 525 aa17.53■□□□□ 0.4
RPAIN-213ENST00000573577 CLEC4GQ6UXB4 293 aa17.53■□□□□ 0.4
RPAIN-213ENST00000573577 A0A0G2JLW4 131 aa17.52■□□□□ 0.4
RPAIN-213ENST00000573577 GRIN3BO60391 1043 aa17.52■□□□□ 0.4
RPAIN-213ENST00000573577 HOXB7P09629 217 aa17.52■□□□□ 0.4
RPAIN-213ENST00000573577 DPEP1P16444 411 aa17.52■□□□□ 0.4
RPAIN-213ENST00000573577 EIF2S2P20042 333 aaKnown RBP17.52■□□□□ 0.4
RPAIN-213ENST00000573577 AFDNP55196 1824 aaKnown RBP17.51■□□□□ 0.39
RPAIN-213ENST00000573577 SETDB2Q96T68 719 aa17.51■□□□□ 0.39
RPAIN-213ENST00000573577 CHMP4AQ9BY43 222 aa17.51■□□□□ 0.39
RPAIN-213ENST00000573577 MYH16Q9H6N6 1097 aa17.51■□□□□ 0.39
RPAIN-213ENST00000573577 WWC3Q9ULE0 1092 aa17.51■□□□□ 0.39
RPAIN-213ENST00000573577 U3KPZ7 1027 aaPredicted RBP17.51■□□□□ 0.39
RPAIN-213ENST00000573577 N4BP2Q86UW6 1770 aaPredicted RBP17.51■□□□□ 0.39
RPAIN-213ENST00000573577 YY1P25490 414 aa17.5■□□□□ 0.39
RPAIN-213ENST00000573577 PDIA6Q15084 440 aa17.5■□□□□ 0.39
RPAIN-213ENST00000573577 KIF6Q6ZMV9 814 aa17.5■□□□□ 0.39
RPAIN-213ENST00000573577 MAP3K15Q6ZN16 1313 aa17.49■□□□□ 0.39
RPAIN-213ENST00000573577 ZNF521Q96K83 1311 aa17.49■□□□□ 0.39
RPAIN-213ENST00000573577 ERVV-1B6SEH8 477 aa17.49■□□□□ 0.39
RPAIN-213ENST00000573577 GOLGA2Q08379 1002 aa17.49■□□□□ 0.39
RPAIN-213ENST00000573577 TTLL7Q6ZT98 887 aa17.49■□□□□ 0.39
RPAIN-213ENST00000573577 LRP10Q7Z4F1 713 aa17.49■□□□□ 0.39
RPAIN-213ENST00000573577 NECTIN2Q92692 538 aa17.49■□□□□ 0.39
RPAIN-213ENST00000573577 RNF39Q9H2S5 420 aa17.49■□□□□ 0.39
RPAIN-213ENST00000573577 KCNA3P22001 575 aa17.48■□□□□ 0.39
RPAIN-213ENST00000573577 HLFQ16534 295 aa17.48■□□□□ 0.39
RPAIN-213ENST00000573577 PROSER3Q2NL68 480 aa17.48■□□□□ 0.39
RPAIN-213ENST00000573577 HDGFL1Q5TGJ6 251 aa17.48■□□□□ 0.39
RPAIN-213ENST00000573577 DUSP27Q5VZP5 1158 aa17.48■□□□□ 0.39
RPAIN-213ENST00000573577 PRR5LQ6MZQ0 368 aa17.48■□□□□ 0.39
RPAIN-213ENST00000573577 CNBD1Q8NA66 436 aa17.48■□□□□ 0.39
RPAIN-213ENST00000573577 TSR2Q969E8 191 aaKnown RBP17.48■□□□□ 0.39
RPAIN-213ENST00000573577 CHRNA5P30532 468 aa17.47■□□□□ 0.39
RPAIN-213ENST00000573577 ZBTB3Q9H5J0 574 aa17.47■□□□□ 0.39
RPAIN-213ENST00000573577 DDX21Q9NR30 783 aaKnown RBP eCLIP17.47■□□□□ 0.39
RPAIN-213ENST00000573577 PIM2Q9P1W9 311 aa17.47■□□□□ 0.39
RPAIN-213ENST00000573577 NIP7Q9Y221 180 aaKnown RBP eCLIP17.47■□□□□ 0.39
RPAIN-213ENST00000573577 FANCIQ9NVI1 1328 aa17.47■□□□□ 0.39
RPAIN-213ENST00000573577 E9PSI1 815 aa17.46■□□□□ 0.39
RPAIN-213ENST00000573577 NPHP1O15259 732 aa17.46■□□□□ 0.39
RPAIN-213ENST00000573577 ANXA1P04083 346 aa17.46■□□□□ 0.39
RPAIN-213ENST00000573577 HNRNPUQ00839 825 aaKnown RBP eCLIP17.46■□□□□ 0.39
RPAIN-213ENST00000573577 NBPF5PQ86XG9 351 aaPredicted RBP17.46■□□□□ 0.39
RPAIN-213ENST00000573577 CHPF2Q9P2E5 772 aa17.46■□□□□ 0.39
RPAIN-213ENST00000573577 BCS1LQ9Y276 419 aa17.46■□□□□ 0.39
RPAIN-213ENST00000573577 ATP10DQ9P241 1426 aa17.46■□□□□ 0.39
RPAIN-213ENST00000573577 ST5P78524 1137 aa17.45■□□□□ 0.38
RPAIN-213ENST00000573577 BRIP1Q9BX63 1249 aa17.45■□□□□ 0.38
RPAIN-213ENST00000573577 BRCA1P38398 1863 aaKnown RBP17.45■□□□□ 0.38
RPAIN-213ENST00000573577 DALRD3Q5D0E6 543 aaKnown RBP17.44■□□□□ 0.38
RPAIN-213ENST00000573577 CCDC24Q8N4L8 307 aa17.44■□□□□ 0.38
RPAIN-213ENST00000573577 C8orf58Q8NAV2 365 aa17.44■□□□□ 0.38
RPAIN-213ENST00000573577 DBF4Q9UBU7 674 aaPredicted RBP17.44■□□□□ 0.38
RPAIN-213ENST00000573577 CHD4Q14839 1912 aa17.43■□□□□ 0.38
RPAIN-213ENST00000573577 ELL2O00472 640 aaPredicted RBP17.43■□□□□ 0.38
RPAIN-213ENST00000573577 PDE6BP35913 854 aa17.43■□□□□ 0.38
RPAIN-213ENST00000573577 TWISTNBQ3B726 338 aaPredicted RBP17.43■□□□□ 0.38
RPAIN-213ENST00000573577 GIGYF2Q6Y7W6 1299 aaKnown RBP17.43■□□□□ 0.38
RPAIN-213ENST00000573577 COPS6Q7L5N1 327 aa17.43■□□□□ 0.38
RPAIN-213ENST00000573577 C2CD5Q86YS7 1000 aa17.43■□□□□ 0.38
RPAIN-213ENST00000573577 XAGE3Q8WTP9 111 aa17.43■□□□□ 0.38
RPAIN-213ENST00000573577 SPINK5Q9NQ38 1064 aaPredicted RBP17.43■□□□□ 0.38
RPAIN-213ENST00000573577 ANKRD31Q8N7Z5 1873 aa17.42■□□□□ 0.38
RPAIN-213ENST00000573577 H0YIN7 160 aa17.42■□□□□ 0.38
RPAIN-213ENST00000573577 AIMP1Q12904 312 aaKnown RBP17.42■□□□□ 0.38
RPAIN-213ENST00000573577 CCDC30Q5VVM6 783 aa17.42■□□□□ 0.38
RPAIN-213ENST00000573577 TPTE2Q6XPS3 522 aa17.42■□□□□ 0.38
RPAIN-213ENST00000573577 PDZRN3Q9UPQ7 1066 aa17.42■□□□□ 0.38
RPAIN-213ENST00000573577 DLEC1Q9Y238 1755 aa17.42■□□□□ 0.38
RPAIN-213ENST00000573577 FAM177BA6PVY3 158 aa17.41■□□□□ 0.38
RPAIN-213ENST00000573577 GPTP24298 496 aa17.41■□□□□ 0.38
RPAIN-213ENST00000573577 SLFN5Q08AF3 891 aa17.41■□□□□ 0.38
RPAIN-213ENST00000573577 TSPYL6Q8N831 410 aa17.41■□□□□ 0.38
RPAIN-213ENST00000573577 HYPKQ9NX55 129 aa17.41■□□□□ 0.38
RPAIN-213ENST00000573577 NUP98P52948 1817 aa17.41■□□□□ 0.38
RPAIN-213ENST00000573577 UBN2Q6ZU65 1347 aa17.41■□□□□ 0.38
RPAIN-213ENST00000573577 EXOSC9Q06265 439 aaKnown RBP17.4■□□□□ 0.38
RPAIN-213ENST00000573577 ZNF34Q8IZ26 560 aa17.4■□□□□ 0.38
RPAIN-213ENST00000573577 NYXQ9GZU5 481 aa17.4■□□□□ 0.38
RPAIN-213ENST00000573577 IBTKQ9P2D0 1353 aaPredicted RBP17.4■□□□□ 0.38
RPAIN-213ENST00000573577 COL11A2P13942 1736 aaPredicted RBP17.39■□□□□ 0.37
RPAIN-213ENST00000573577 TTLL6Q8N841 843 aa17.39■□□□□ 0.37
RPAIN-213ENST00000573577 STK31Q9BXU1 1019 aa17.39■□□□□ 0.37
RPAIN-213ENST00000573577 ARFGEF1Q9Y6D6 1849 aa17.39■□□□□ 0.37
RPAIN-213ENST00000573577 MYCNP04198 464 aaPredicted RBP17.38■□□□□ 0.37
RPAIN-213ENST00000573577 GTF2E1P29083 439 aaPredicted RBP17.38■□□□□ 0.37
RPAIN-213ENST00000573577 PARP10Q53GL7 1025 aa17.38■□□□□ 0.37
RPAIN-213ENST00000573577 ARHGAP27Q6ZUM4 889 aa17.38■□□□□ 0.37
RPAIN-213ENST00000573577 ZBED9Q6R2W3 1325 aa17.38■□□□□ 0.37
RPAIN-213ENST00000573577 SRGNP10124 158 aa17.37■□□□□ 0.37
RPAIN-213ENST00000573577 HSP90AB3PQ58FF7 597 aa17.37■□□□□ 0.37
RPAIN-213ENST00000573577 SUSD4Q5VX71 490 aa17.37■□□□□ 0.37
RPAIN-213ENST00000573577 PLBD2Q8NHP8 589 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms