RNA–Protein interactions for RNA: ENST00000571945.5

ABR-215, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 4

Gene ABR, Length 760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-215	ENST00000571945	DDX21	Q9NR30	783 aa	Known RBP eCLIP	32.8	■■■□□ 2.84
ABR-215	ENST00000571945	SERPINB2	P05120	415 aa		32.79	■■■□□ 2.84
ABR-215	ENST00000571945	BICDL1	Q6ZP65	573 aa		32.78	■■■□□ 2.84
ABR-215	ENST00000571945	SALL2	Q9Y467	1007 aa	Predicted RBP	32.78	■■■□□ 2.84
ABR-215	ENST00000571945	ANKRD36C	Q5JPF3	1778 aa		32.78	■■■□□ 2.84
ABR-215	ENST00000571945	DLEC1	Q9Y238	1755 aa		32.78	■■■□□ 2.84
ABR-215	ENST00000571945	ATP10D	Q9P241	1426 aa		32.77	■■■□□ 2.84
ABR-215	ENST00000571945	PROSER3	Q2NL68	480 aa		32.77	■■■□□ 2.84
ABR-215	ENST00000571945	SETDB2	Q96T68	719 aa		32.77	■■■□□ 2.84
ABR-215	ENST00000571945	CHMP4A	Q9BY43	222 aa		32.77	■■■□□ 2.84
ABR-215	ENST00000571945	ANKRD31	Q8N7Z5	1873 aa		32.76	■■■□□ 2.84
ABR-215	ENST00000571945	TTLL7	Q6ZT98	887 aa		32.76	■■■□□ 2.83
ABR-215	ENST00000571945	NECTIN2	Q92692	538 aa		32.76	■■■□□ 2.83
ABR-215	ENST00000571945	TSR2	Q969E8	191 aa	Known RBP	32.76	■■■□□ 2.83
ABR-215	ENST00000571945	CHPF2	Q9P2E5	772 aa		32.75	■■■□□ 2.83
ABR-215	ENST00000571945	DBF4	Q9UBU7	674 aa	Predicted RBP	32.75	■■■□□ 2.83
ABR-215	ENST00000571945	FANCI	Q9NVI1	1328 aa		32.75	■■■□□ 2.83
ABR-215	ENST00000571945	C8orf58	Q8NAV2	365 aa		32.74	■■■□□ 2.83
ABR-215	ENST00000571945	ZNF521	Q96K83	1311 aa		32.74	■■■□□ 2.83
ABR-215	ENST00000571945	ANXA1	P04083	346 aa		32.73	■■■□□ 2.83
ABR-215	ENST00000571945	HLF	Q16534	295 aa		32.73	■■■□□ 2.83
ABR-215	ENST00000571945	GPR162	Q16538	588 aa		32.72	■■■□□ 2.83
ABR-215	ENST00000571945	MIER1	Q8N108	512 aa		32.72	■■■□□ 2.83
ABR-215	ENST00000571945	CHD4	Q14839	1912 aa		32.72	■■■□□ 2.83
ABR-215	ENST00000571945	NIP7	Q9Y221	180 aa	Known RBP eCLIP	32.71	■■■□□ 2.83
ABR-215	ENST00000571945	ZBTB3	Q9H5J0	574 aa		32.7	■■■□□ 2.83
ABR-215	ENST00000571945	HYPK	Q9NX55	129 aa		32.7	■■■□□ 2.83
ABR-215	ENST00000571945	ARFGEF1	Q9Y6D6	1849 aa		32.7	■■■□□ 2.82
ABR-215	ENST00000571945	GOLGB1	Q14789	3259 aa	Known RBP	32.69	■■■□□ 2.82
ABR-215	ENST00000571945	CACNA1F	O60840	1977 aa		32.69	■■■□□ 2.82
ABR-215	ENST00000571945	ELL2	O00472	640 aa	Predicted RBP	32.69	■■■□□ 2.82
ABR-215	ENST00000571945	PRR5L	Q6MZQ0	368 aa		32.69	■■■□□ 2.82
ABR-215	ENST00000571945	GIGYF2	Q6Y7W6	1299 aa	Known RBP	32.69	■■■□□ 2.82
ABR-215	ENST00000571945	CNBD1	Q8NA66	436 aa		32.69	■■■□□ 2.82
ABR-215	ENST00000571945	XAGE3	Q8WTP9	111 aa		32.69	■■■□□ 2.82
ABR-215	ENST00000571945	IBTK	Q9P2D0	1353 aa	Predicted RBP	32.69	■■■□□ 2.82
ABR-215	ENST00000571945	COPS6	Q7L5N1	327 aa		32.68	■■■□□ 2.82
ABR-215	ENST00000571945	PELP1	Q8IZL8	1130 aa	Known RBP	32.68	■■■□□ 2.82
ABR-215	ENST00000571945	MYH16	Q9H6N6	1097 aa		32.68	■■■□□ 2.82
ABR-215	ENST00000571945	ARFGEF2	Q9Y6D5	1785 aa		32.68	■■■□□ 2.82
ABR-215	ENST00000571945	DPEP1	P16444	411 aa		32.67	■■■□□ 2.82
ABR-215	ENST00000571945	TSPYL6	Q8N831	410 aa		32.67	■■■□□ 2.82
ABR-215	ENST00000571945	COL11A2	P13942	1736 aa	Predicted RBP	32.67	■■■□□ 2.82
ABR-215	ENST00000571945		A0A0G2JLW4	131 aa		32.66	■■■□□ 2.82
ABR-215	ENST00000571945	YBX3	P16989	372 aa	Known RBP eCLIP	32.66	■■■□□ 2.82
ABR-215	ENST00000571945	CCDC30	Q5VVM6	783 aa		32.66	■■■□□ 2.82
ABR-215	ENST00000571945	NBPF5P	Q86XG9	351 aa	Predicted RBP	32.66	■■■□□ 2.82
ABR-215	ENST00000571945	UTRN	P46939	3433 aa		32.66	■■■□□ 2.82
ABR-215	ENST00000571945	ST5	P78524	1137 aa		32.65	■■■□□ 2.82
ABR-215	ENST00000571945	GOLGA2	Q08379	1002 aa		32.65	■■■□□ 2.82
ABR-215	ENST00000571945	TWISTNB	Q3B726	338 aa	Predicted RBP	32.65	■■■□□ 2.82
ABR-215	ENST00000571945	NPHP1	O15259	732 aa		32.64	■■■□□ 2.82
ABR-215	ENST00000571945	GRIN3B	O60391	1043 aa		32.64	■■■□□ 2.82
ABR-215	ENST00000571945	BRIP1	Q9BX63	1249 aa		32.64	■■■□□ 2.82
ABR-215	ENST00000571945	PDZRN3	Q9UPQ7	1066 aa		32.64	■■■□□ 2.82
ABR-215	ENST00000571945	AIMP1	Q12904	312 aa	Known RBP	32.63	■■■□□ 2.81
ABR-215	ENST00000571945	HSP90AB3P	Q58FF7	597 aa		32.63	■■■□□ 2.81
ABR-215	ENST00000571945	SPINK5	Q9NQ38	1064 aa	Predicted RBP	32.63	■■■□□ 2.81
ABR-215	ENST00000571945	KCNA3	P22001	575 aa		32.62	■■■□□ 2.81
ABR-215	ENST00000571945	TPTE2	Q6XPS3	522 aa		32.62	■■■□□ 2.81
ABR-215	ENST00000571945	ZNF34	Q8IZ26	560 aa		32.62	■■■□□ 2.81
ABR-215	ENST00000571945	PDE6B	P35913	854 aa		32.61	■■■□□ 2.81
ABR-215	ENST00000571945	PLBD2	Q8NHP8	589 aa		32.61	■■■□□ 2.81
ABR-215	ENST00000571945	NYX	Q9GZU5	481 aa		32.61	■■■□□ 2.81
ABR-215	ENST00000571945	RIC1	Q4ADV7	1423 aa		32.6	■■■□□ 2.81
ABR-215	ENST00000571945	UBN2	Q6ZU65	1347 aa		32.6	■■■□□ 2.81
ABR-215	ENST00000571945	PARP10	Q53GL7	1025 aa		32.6	■■■□□ 2.81
ABR-215	ENST00000571945	PIM2	Q9P1W9	311 aa		32.6	■■■□□ 2.81
ABR-215	ENST00000571945	CHRNA5	P30532	468 aa		32.59	■■■□□ 2.81
ABR-215	ENST00000571945	STK31	Q9BXU1	1019 aa		32.58	■■■□□ 2.81
ABR-215	ENST00000571945	TNRC6C	Q9HCJ0	1690 aa	Known RBP	32.57	■■■□□ 2.8
ABR-215	ENST00000571945	GPT	P24298	496 aa		32.57	■■■□□ 2.8
ABR-215	ENST00000571945	EXOSC9	Q06265	439 aa	Known RBP	32.57	■■■□□ 2.8
ABR-215	ENST00000571945	ANKRD13D	Q6ZTN6	518 aa		32.57	■■■□□ 2.8
ABR-215	ENST00000571945		H0YIN7	160 aa		32.56	■■■□□ 2.8
ABR-215	ENST00000571945	C2CD5	Q86YS7	1000 aa		32.56	■■■□□ 2.8
ABR-215	ENST00000571945	WWC3	Q9ULE0	1092 aa		32.56	■■■□□ 2.8
ABR-215	ENST00000571945	RNF123	Q5XPI4	1314 aa		32.55	■■■□□ 2.8
ABR-215	ENST00000571945		E9PSI1	815 aa		32.55	■■■□□ 2.8
ABR-215	ENST00000571945	TCIRG1	Q13488	830 aa		32.55	■■■□□ 2.8
ABR-215	ENST00000571945	DALRD3	Q5D0E6	543 aa	Known RBP	32.54	■■■□□ 2.8
ABR-215	ENST00000571945	PPP1R42	Q7Z4L9	355 aa		32.54	■■■□□ 2.8
ABR-215	ENST00000571945	CCDC24	Q8N4L8	307 aa		32.54	■■■□□ 2.8
ABR-215	ENST00000571945	PHAX	Q9H814	394 aa	Known RBP	32.54	■■■□□ 2.8
ABR-215	ENST00000571945	BCS1L	Q9Y276	419 aa		32.54	■■■□□ 2.8
ABR-215	ENST00000571945	FAM177B	A6PVY3	158 aa		32.53	■■■□□ 2.8
ABR-215	ENST00000571945	VAMP4	O75379	141 aa		32.53	■■■□□ 2.8
ABR-215	ENST00000571945	ABCC12	Q96J65	1359 aa		32.53	■■■□□ 2.8
ABR-215	ENST00000571945	NTSR2	O95665	410 aa		32.52	■■■□□ 2.8
ABR-215	ENST00000571945	GTF2E1	P29083	439 aa	Predicted RBP	32.52	■■■□□ 2.8
ABR-215	ENST00000571945	SUSD4	Q5VX71	490 aa		32.52	■■■□□ 2.8
ABR-215	ENST00000571945	CACNA1S	Q13698	1873 aa		32.52	■■■□□ 2.8
ABR-215	ENST00000571945	DDX58	O95786	925 aa	Known RBP	32.51	■■■□□ 2.79
ABR-215	ENST00000571945	KLRG2	A4D1S0	409 aa	Predicted RBP	32.5	■■■□□ 2.79
ABR-215	ENST00000571945	NLRP10	Q86W26	655 aa		32.49	■■■□□ 2.79
ABR-215	ENST00000571945	SRGN	P10124	158 aa		32.48	■■■□□ 2.79
ABR-215	ENST00000571945	SLFN5	Q08AF3	891 aa		32.48	■■■□□ 2.79
ABR-215	ENST00000571945	STYK1	Q6J9G0	422 aa		32.48	■■■□□ 2.79
ABR-215	ENST00000571945	RIC3	Q7Z5B4	369 aa		32.48	■■■□□ 2.79
ABR-215	ENST00000571945	NUTM1	Q86Y26	1132 aa		32.48	■■■□□ 2.79

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