RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 TCERG1O14776 1098 aaKnown RBP11.74□□□□□ -0.53
GTF3C1-210ENST00000569394 SERPINB2P05120 415 aa11.74□□□□□ -0.53
GTF3C1-210ENST00000569394 DPEP1P16444 411 aa11.74□□□□□ -0.53
GTF3C1-210ENST00000569394 YBX3P16989 372 aaKnown RBP eCLIP11.74□□□□□ -0.532e-8■■■■□ 24.8
GTF3C1-210ENST00000569394 TM4SF1P30408 202 aa11.74□□□□□ -0.53
GTF3C1-210ENST00000569394 CHRNA5P30532 468 aa11.74□□□□□ -0.53
GTF3C1-210ENST00000569394 DIEXFQ68CQ4 756 aaKnown RBP11.74□□□□□ -0.53
GTF3C1-210ENST00000569394 ZBTB3Q9H5J0 574 aa11.74□□□□□ -0.53
GTF3C1-210ENST00000569394 CD2APQ9Y5K6 639 aa11.74□□□□□ -0.53
GTF3C1-210ENST00000569394 CAMTA2O94983 1202 aa11.73□□□□□ -0.53
GTF3C1-210ENST00000569394 HLFQ16534 295 aa11.73□□□□□ -0.53
GTF3C1-210ENST00000569394 DUSP27Q5VZP5 1158 aa11.73□□□□□ -0.53
GTF3C1-210ENST00000569394 CFAP44Q96MT7 982 aa11.73□□□□□ -0.53
GTF3C1-210ENST00000569394 AFDNP55196 1824 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-210ENST00000569394 GPTP24298 496 aa11.72□□□□□ -0.53
GTF3C1-210ENST00000569394 GNAI1P63096 354 aa11.72□□□□□ -0.53
GTF3C1-210ENST00000569394 KIF6Q6ZMV9 814 aa11.72□□□□□ -0.53
GTF3C1-210ENST00000569394 WWC1Q8IX03 1113 aa11.72□□□□□ -0.53
GTF3C1-210ENST00000569394 MIER1Q8N108 512 aa11.72□□□□□ -0.53
GTF3C1-210ENST00000569394 SETDB2Q96T68 719 aa11.72□□□□□ -0.53
GTF3C1-210ENST00000569394 CHPF2Q9P2E5 772 aa11.72□□□□□ -0.53
GTF3C1-210ENST00000569394 BCS1LQ9Y276 419 aa11.72□□□□□ -0.53
GTF3C1-210ENST00000569394 CHD4Q14839 1912 aa11.72□□□□□ -0.53
GTF3C1-210ENST00000569394 HDGFL1Q5TGJ6 251 aa11.71□□□□□ -0.53
GTF3C1-210ENST00000569394 C8orf58Q8NAV2 365 aa11.71□□□□□ -0.53
GTF3C1-210ENST00000569394 ZNF784Q8NCA9 323 aaPredicted RBP11.71□□□□□ -0.53
GTF3C1-210ENST00000569394 IFT57Q9NWB7 429 aa11.71□□□□□ -0.53
GTF3C1-210ENST00000569394 NIP7Q9Y221 180 aaKnown RBP eCLIP11.71□□□□□ -0.53
GTF3C1-210ENST00000569394 CARMIL3Q8ND23 1372 aa11.7□□□□□ -0.54
GTF3C1-210ENST00000569394 CALD1Q05682 793 aaKnown RBP11.7□□□□□ -0.54
GTF3C1-210ENST00000569394 POLA2Q14181 598 aa11.7□□□□□ -0.54
GTF3C1-210ENST00000569394 COPS6Q7L5N1 327 aa11.7□□□□□ -0.54
GTF3C1-210ENST00000569394 TSPYL6Q8N831 410 aa11.7□□□□□ -0.54
GTF3C1-210ENST00000569394 XAGE3Q8WTP9 111 aa11.7□□□□□ -0.54
GTF3C1-210ENST00000569394 BABAM1Q9NWV8 329 aa11.7□□□□□ -0.54
GTF3C1-210ENST00000569394 ZNF652Q9Y2D9 606 aa11.7□□□□□ -0.54
GTF3C1-210ENST00000569394 SCN7AQ01118 1682 aa11.7□□□□□ -0.54
GTF3C1-210ENST00000569394 BCORQ6W2J9 1755 aa11.69□□□□□ -0.54
GTF3C1-210ENST00000569394 ZNF853P0CG23 659 aa11.69□□□□□ -0.54
GTF3C1-210ENST00000569394 GTF2E1P29083 439 aaPredicted RBP11.69□□□□□ -0.54
GTF3C1-210ENST00000569394 PDIA6Q15084 440 aa11.69□□□□□ -0.54
GTF3C1-210ENST00000569394 NBPF5PQ86XG9 351 aaPredicted RBP11.69□□□□□ -0.54
GTF3C1-210ENST00000569394 FBXO3Q9UK99 471 aa11.69□□□□□ -0.54
GTF3C1-210ENST00000569394 PXDNLA1KZ92 1463 aa11.69□□□□□ -0.54
GTF3C1-210ENST00000569394 C10orf71Q711Q0 1435 aa11.69□□□□□ -0.54
GTF3C1-210ENST00000569394 PRR5LQ6MZQ0 368 aa11.68□□□□□ -0.54
GTF3C1-210ENST00000569394 NUTM1Q86Y26 1132 aa11.68□□□□□ -0.54
GTF3C1-210ENST00000569394 C2CD5Q86YS7 1000 aa11.68□□□□□ -0.54
GTF3C1-210ENST00000569394 CNBD1Q8NA66 436 aa11.68□□□□□ -0.54
GTF3C1-210ENST00000569394 ZNF622Q969S3 477 aaKnown RBP eCLIP11.68□□□□□ -0.541e-7■□□□□ 9.9
GTF3C1-210ENST00000569394 NUP98P52948 1817 aa11.67□□□□□ -0.54
GTF3C1-210ENST00000569394 MAP3K15Q6ZN16 1313 aa11.67□□□□□ -0.54
GTF3C1-210ENST00000569394 TGFB2P61812 414 aa11.67□□□□□ -0.54
GTF3C1-210ENST00000569394 ST5P78524 1137 aa11.67□□□□□ -0.54
GTF3C1-210ENST00000569394 ARHGAP27Q6ZUM4 889 aa11.67□□□□□ -0.54
GTF3C1-210ENST00000569394 PHAXQ9H814 394 aaKnown RBP11.67□□□□□ -0.54
GTF3C1-210ENST00000569394 KIAA1551Q9HCM1 1747 aa11.66□□□□□ -0.54
GTF3C1-210ENST00000569394 KIF13BQ9NQT8 1826 aa11.66□□□□□ -0.54
GTF3C1-210ENST00000569394 KCNA3P22001 575 aa11.66□□□□□ -0.54
GTF3C1-210ENST00000569394 EXOSC9Q06265 439 aaKnown RBP11.66□□□□□ -0.54
GTF3C1-210ENST00000569394 DDX21Q9NR30 783 aaKnown RBP eCLIP11.66□□□□□ -0.54
GTF3C1-210ENST00000569394 PIM2Q9P1W9 311 aa11.66□□□□□ -0.54
GTF3C1-210ENST00000569394 FANCIQ9NVI1 1328 aa11.65□□□□□ -0.54
GTF3C1-210ENST00000569394 ATP5J2-PTCD1G3V325 749 aa11.65□□□□□ -0.54
GTF3C1-210ENST00000569394 H0YIN7 160 aa11.65□□□□□ -0.54
GTF3C1-210ENST00000569394 GRIN3BO60391 1043 aa11.65□□□□□ -0.54
GTF3C1-210ENST00000569394 C1QTNF8P60827 252 aa11.65□□□□□ -0.54
GTF3C1-210ENST00000569394 CCDC27Q2M243 656 aa11.65□□□□□ -0.54
GTF3C1-210ENST00000569394 TWISTNBQ3B726 338 aaPredicted RBP11.65□□□□□ -0.54
GTF3C1-210ENST00000569394 ERFEQ4G0M1 354 aa11.65□□□□□ -0.54
GTF3C1-210ENST00000569394 DALRD3Q5D0E6 543 aaKnown RBP11.65□□□□□ -0.54
GTF3C1-210ENST00000569394 RTL5Q5HYW3 569 aaPredicted RBP11.65□□□□□ -0.54
GTF3C1-210ENST00000569394 SUSD4Q5VX71 490 aa11.65□□□□□ -0.54
GTF3C1-210ENST00000569394 DBF4Q9UBU7 674 aaPredicted RBP11.65□□□□□ -0.54
GTF3C1-210ENST00000569394 CACNA1SQ13698 1873 aa11.65□□□□□ -0.54
GTF3C1-210ENST00000569394 UTRNP46939 3433 aa11.64□□□□□ -0.55
GTF3C1-210ENST00000569394 ANKRD31Q8N7Z5 1873 aa11.64□□□□□ -0.55
GTF3C1-210ENST00000569394 CLEC4GQ6UXB4 293 aa11.64□□□□□ -0.55
GTF3C1-210ENST00000569394 TPTE2Q6XPS3 522 aa11.64□□□□□ -0.55
GTF3C1-210ENST00000569394 LRP10Q7Z4F1 713 aa11.64□□□□□ -0.55
GTF3C1-210ENST00000569394 RIC3Q7Z5B4 369 aa11.64□□□□□ -0.55
GTF3C1-210ENST00000569394 ZNF526Q8TF50 670 aaPredicted RBP11.64□□□□□ -0.55
GTF3C1-210ENST00000569394 GOLGB1Q14789 3259 aaKnown RBP11.64□□□□□ -0.55
GTF3C1-210ENST00000569394 ERBB4Q15303 1308 aa11.63□□□□□ -0.55
GTF3C1-210ENST00000569394 UBN2Q6ZU65 1347 aa11.63□□□□□ -0.55
GTF3C1-210ENST00000569394 ERVV-1B6SEH8 477 aa11.63□□□□□ -0.55
GTF3C1-210ENST00000569394 CCER2I3L3R5 266 aa11.63□□□□□ -0.55
GTF3C1-210ENST00000569394 CAPN15O75808 1086 aa11.63□□□□□ -0.55
GTF3C1-210ENST00000569394 GOLGA2Q08379 1002 aa11.63□□□□□ -0.55
GTF3C1-210ENST00000569394 ANKRD13DQ6ZTN6 518 aa11.63□□□□□ -0.55
GTF3C1-210ENST00000569394 WDR63Q8IWG1 891 aa11.63□□□□□ -0.55
GTF3C1-210ENST00000569394 SYNE4Q8N205 404 aa11.63□□□□□ -0.55
GTF3C1-210ENST00000569394 JARID2Q92833 1246 aaPredicted RBP11.63□□□□□ -0.55
GTF3C1-210ENST00000569394 NRXN2Q9P2S2 1712 aa11.63□□□□□ -0.55
GTF3C1-210ENST00000569394 PDE6BP35913 854 aa11.62□□□□□ -0.55
GTF3C1-210ENST00000569394 VASPP50552 380 aaPredicted RBP11.62□□□□□ -0.55
GTF3C1-210ENST00000569394 CCDC30Q5VVM6 783 aa11.62□□□□□ -0.55
GTF3C1-210ENST00000569394 GIGYF2Q6Y7W6 1299 aaKnown RBP11.62□□□□□ -0.55
GTF3C1-210ENST00000569394 G2E3Q7L622 706 aa11.62□□□□□ -0.55
GTF3C1-210ENST00000569394 ZNF34Q8IZ26 560 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms