RNA–Protein interactions for RNA: ENST00000569374.1

CCDC113-205, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-205ENST00000569374 NAIPQ13075 1403 aa11.52□□□□□ -0.56
CCDC113-205ENST00000569374 SSFA2P28290 1259 aa11.52□□□□□ -0.57
CCDC113-205ENST00000569374 TXNDC2Q86VQ3 553 aa11.52□□□□□ -0.57
CCDC113-205ENST00000569374 MED1Q15648 1581 aaPredicted RBP11.52□□□□□ -0.57
CCDC113-205ENST00000569374 PIP4K2BP78356 416 aa11.51□□□□□ -0.57
CCDC113-205ENST00000569374 LCE2DQ5TA82 110 aaPredicted RBP11.51□□□□□ -0.57
CCDC113-205ENST00000569374 ILDR2Q71H61 639 aa11.51□□□□□ -0.57
CCDC113-205ENST00000569374 ZNF594Q96JF6 807 aaPredicted RBP11.51□□□□□ -0.57
CCDC113-205ENST00000569374 AMOTL2Q9Y2J4 779 aa11.51□□□□□ -0.57
CCDC113-205ENST00000569374 SETD1AO15047 1707 aaKnown RBP11.51□□□□□ -0.57
CCDC113-205ENST00000569374 RIMS2Q9UQ26 1411 aa11.51□□□□□ -0.57
CCDC113-205ENST00000569374 ROBO1Q9Y6N7 1651 aa11.5□□□□□ -0.57
CCDC113-205ENST00000569374 DPYDQ12882 1025 aa11.5□□□□□ -0.57
CCDC113-205ENST00000569374 ERFEQ4G0M1 354 aa11.5□□□□□ -0.57
CCDC113-205ENST00000569374 FOXD4L5Q5VV16 416 aaPredicted RBP11.5□□□□□ -0.57
CCDC113-205ENST00000569374 ZNF511Q8NB15 262 aa11.5□□□□□ -0.57
CCDC113-205ENST00000569374 FOXD4L4Q8WXT5 416 aaPredicted RBP11.5□□□□□ -0.57
CCDC113-205ENST00000569374 BAP1Q92560 729 aa11.5□□□□□ -0.57
CCDC113-205ENST00000569374 SLC26A8Q96RN1 970 aa11.5□□□□□ -0.57
CCDC113-205ENST00000569374 KIF1BO60333 1816 aa11.5□□□□□ -0.57
CCDC113-205ENST00000569374 NUP155O75694 1391 aa11.5□□□□□ -0.57
CCDC113-205ENST00000569374 HSPA1LP34931 641 aa11.49□□□□□ -0.57
CCDC113-205ENST00000569374 OXLD1Q5BKU9 147 aa11.49□□□□□ -0.57
CCDC113-205ENST00000569374 TJAP1Q5JTD0 557 aa11.49□□□□□ -0.57
CCDC113-205ENST00000569374 SEPT12Q8IYM1 358 aa11.49□□□□□ -0.57
CCDC113-205ENST00000569374 SIX5Q8N196 739 aa11.49□□□□□ -0.57
CCDC113-205ENST00000569374 DISP3Q9P2K9 1392 aa11.49□□□□□ -0.57
CCDC113-205ENST00000569374 ADAMTS13Q76LX8 1427 aa11.49□□□□□ -0.57
CCDC113-205ENST00000569374 TRPM2O94759 1503 aa11.49□□□□□ -0.57
CCDC113-205ENST00000569374 XRN1Q8IZH2 1706 aaKnown RBP11.49□□□□□ -0.57
CCDC113-205ENST00000569374 ATP2B4P23634 1241 aa11.48□□□□□ -0.57
CCDC113-205ENST00000569374 CLDN10P78369 228 aa11.48□□□□□ -0.57
CCDC113-205ENST00000569374 USP4Q13107 963 aa11.48□□□□□ -0.57
CCDC113-205ENST00000569374 NEXMIFQ5QGS0 1516 aa11.48□□□□□ -0.57
CCDC113-205ENST00000569374 GIGYF1O75420 1035 aaPredicted RBP11.47□□□□□ -0.57
CCDC113-205ENST00000569374 RBM25P49756 843 aaKnown RBP11.47□□□□□ -0.57
CCDC113-205ENST00000569374 PTPN5P54829 565 aa11.47□□□□□ -0.57
CCDC113-205ENST00000569374 SEC13P55735 322 aa11.47□□□□□ -0.57
CCDC113-205ENST00000569374 GTF2IP78347 998 aa11.47□□□□□ -0.57
CCDC113-205ENST00000569374 PHLDB3Q6NSJ2 640 aa11.47□□□□□ -0.57
CCDC113-205ENST00000569374 TRIM52Q96A61 297 aa11.47□□□□□ -0.57
CCDC113-205ENST00000569374 PPLO60437 1756 aa11.46□□□□□ -0.57
CCDC113-205ENST00000569374 ZNF516Q92618 1163 aa11.46□□□□□ -0.57
CCDC113-205ENST00000569374 CCDC85AQ96PX6 553 aaPredicted RBP11.46□□□□□ -0.57
CCDC113-205ENST00000569374 FCF1Q9Y324 198 aaKnown RBP11.46□□□□□ -0.57
CCDC113-205ENST00000569374 NALCNQ8IZF0 1738 aa11.46□□□□□ -0.58
CCDC113-205ENST00000569374 HFM1A2PYH4 1435 aa11.45□□□□□ -0.58
CCDC113-205ENST00000569374 PTPRUQ92729 1446 aa11.45□□□□□ -0.58
CCDC113-205ENST00000569374 TMEM94Q12767 1356 aa11.45□□□□□ -0.58
CCDC113-205ENST00000569374 PSME1Q06323 249 aa11.45□□□□□ -0.58
CCDC113-205ENST00000569374 LINC01559Q495D7 138 aa11.45□□□□□ -0.58
CCDC113-205ENST00000569374 C1orf216Q8TAB5 229 aa11.45□□□□□ -0.58
CCDC113-205ENST00000569374 FOXJ1Q92949 421 aa11.45□□□□□ -0.58
CCDC113-205ENST00000569374 KRTAP3-3Q9BYR6 98 aa11.45□□□□□ -0.58
CCDC113-205ENST00000569374 KRTAP3-2Q9BYR7 98 aa11.45□□□□□ -0.58
CCDC113-205ENST00000569374 PCDH10Q9P2E7 1040 aa11.45□□□□□ -0.58
CCDC113-205ENST00000569374 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.45□□□□□ -0.58
CCDC113-205ENST00000569374 IFT172Q9UG01 1749 aa11.45□□□□□ -0.58
CCDC113-205ENST00000569374 NKTRP30414 1462 aaKnown RBP11.44□□□□□ -0.58
CCDC113-205ENST00000569374 PLEKHG1Q9ULL1 1385 aa11.44□□□□□ -0.58
CCDC113-205ENST00000569374 S1PR4O95977 384 aa11.44□□□□□ -0.58
CCDC113-205ENST00000569374 ERCC3P19447 782 aa11.44□□□□□ -0.58
CCDC113-205ENST00000569374 TSGA10IPQ3SY00 556 aa11.44□□□□□ -0.58
CCDC113-205ENST00000569374 TRMT44Q8IYL2 757 aaKnown RBP11.44□□□□□ -0.58
CCDC113-205ENST00000569374 DIP2AQ14689 1571 aa11.43□□□□□ -0.58
CCDC113-205ENST00000569374 SETBP1Q9Y6X0 1596 aa11.43□□□□□ -0.58
CCDC113-205ENST00000569374 ZBTB24O43167 697 aaPredicted RBP11.43□□□□□ -0.58
CCDC113-205ENST00000569374 CCDC102BQ68D86 513 aa11.43□□□□□ -0.58
CCDC113-205ENST00000569374 C1QTNF2Q9BXJ5 285 aa11.43□□□□□ -0.58
CCDC113-205ENST00000569374 EID1Q9Y6B2 187 aa11.43□□□□□ -0.58
CCDC113-205ENST00000569374 E9PSI1 815 aa11.42□□□□□ -0.58
CCDC113-205ENST00000569374 PCDHB11Q9Y5F2 797 aa11.42□□□□□ -0.58
CCDC113-205ENST00000569374 PHLPP1O60346 1717 aa11.42□□□□□ -0.58
CCDC113-205ENST00000569374 ESPNB1AK53 854 aa11.41□□□□□ -0.58
CCDC113-205ENST00000569374 MYCP01106 439 aaPredicted RBP11.41□□□□□ -0.58
CCDC113-205ENST00000569374 TPCN2Q8NHX9 752 aa11.41□□□□□ -0.58
CCDC113-205ENST00000569374 SLC52A1Q9NWF4 448 aa11.41□□□□□ -0.58
CCDC113-205ENST00000569374 COL16A1Q07092 1604 aaPredicted RBP11.4□□□□□ -0.58
CCDC113-205ENST00000569374 ZBTB7BO15156 539 aaPredicted RBP11.4□□□□□ -0.58
CCDC113-205ENST00000569374 C4orf48Q5BLP8 95 aa11.4□□□□□ -0.58
CCDC113-205ENST00000569374 SOWAHDA6NJG2 315 aa11.39□□□□□ -0.59
CCDC113-205ENST00000569374 SLAIN2Q9P270 581 aa11.39□□□□□ -0.59
CCDC113-205ENST00000569374 POTEMA6NI47 508 aa11.38□□□□□ -0.59
CCDC113-205ENST00000569374 TOM1O60784 492 aa11.38□□□□□ -0.59
CCDC113-205ENST00000569374 KCNA6P17658 529 aa11.38□□□□□ -0.59
CCDC113-205ENST00000569374 GGCXP38435 758 aa11.38□□□□□ -0.59
CCDC113-205ENST00000569374 SH3BP2P78314 561 aa11.38□□□□□ -0.59
CCDC113-205ENST00000569374 KIAA1024Q9UPX6 916 aa11.38□□□□□ -0.59
CCDC113-205ENST00000569374 PCDHGA11Q9Y5H2 935 aa11.38□□□□□ -0.59
CCDC113-205ENST00000569374 ASXL1Q8IXJ9 1541 aa11.38□□□□□ -0.59
CCDC113-205ENST00000569374 DKK1O94907 266 aa11.37□□□□□ -0.59
CCDC113-205ENST00000569374 NKX2-3Q8TAU0 364 aa11.37□□□□□ -0.59
CCDC113-205ENST00000569374 CXXC1Q9P0U4 656 aaPredicted RBP11.37□□□□□ -0.59
CCDC113-205ENST00000569374 METP08581 1390 aa11.37□□□□□ -0.59
CCDC113-205ENST00000569374 PRMT3O60678 531 aa11.36□□□□□ -0.59
CCDC113-205ENST00000569374 VARSP26640 1264 aaKnown RBP11.36□□□□□ -0.59
CCDC113-205ENST00000569374 KCTD15Q96SI1 283 aaPredicted RBP11.36□□□□□ -0.59
CCDC113-205ENST00000569374 HINFPQ9BQA5 517 aa11.36□□□□□ -0.59
CCDC113-205ENST00000569374 EGFL7Q9UHF1 273 aa11.36□□□□□ -0.59
CCDC113-205ENST00000569374 M0R2N6 131 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms