RNA–Protein interactions for RNA: ENST00000568519.5

NEIL1-219, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 771 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-219ENST00000568519 NPM2Q86SE8 214 aaKnown RBP18.33■□□□□ 0.52
NEIL1-219ENST00000568519 C8orf58Q8NAV2 365 aa18.33■□□□□ 0.52
NEIL1-219ENST00000568519 ARHGEF1Q92888 912 aaKnown RBP18.33■□□□□ 0.52
NEIL1-219ENST00000568519 CACNA1FO60840 1977 aa18.33■□□□□ 0.52
NEIL1-219ENST00000568519 SCN7AQ01118 1682 aa18.32■□□□□ 0.52
NEIL1-219ENST00000568519 USP42Q9H9J4 1324 aaKnown RBP18.32■□□□□ 0.52
NEIL1-219ENST00000568519 NBPF26B4DH59 902 aa18.32■□□□□ 0.52
NEIL1-219ENST00000568519 CT47B1P0C2W7 299 aaPredicted RBP18.32■□□□□ 0.52
NEIL1-219ENST00000568519 CANXP27824 592 aaKnown RBP18.32■□□□□ 0.52
NEIL1-219ENST00000568519 RFC4P35249 363 aa18.32■□□□□ 0.52
NEIL1-219ENST00000568519 NBPF10Q6P3W6 841 aaKnown RBP18.32■□□□□ 0.52
NEIL1-219ENST00000568519 NBPF15Q8N660 670 aa18.32■□□□□ 0.52
NEIL1-219ENST00000568519 ZNF428Q96B54 188 aa18.32■□□□□ 0.52
NEIL1-219ENST00000568519 DDX21Q9NR30 783 aaKnown RBP eCLIP18.32■□□□□ 0.52
NEIL1-219ENST00000568519 DBF4Q9UBU7 674 aaPredicted RBP18.32■□□□□ 0.52
NEIL1-219ENST00000568519 DPEP1P16444 411 aa18.31■□□□□ 0.52
NEIL1-219ENST00000568519 KRT24Q2M2I5 525 aa18.31■□□□□ 0.52
NEIL1-219ENST00000568519 TWISTNBQ3B726 338 aaPredicted RBP18.31■□□□□ 0.52
NEIL1-219ENST00000568519 CCDC30Q5VVM6 783 aa18.31■□□□□ 0.52
NEIL1-219ENST00000568519 NARFQ9UHQ1 456 aa18.31■□□□□ 0.52
NEIL1-219ENST00000568519 BCORQ6W2J9 1755 aa18.31■□□□□ 0.52
NEIL1-219ENST00000568519 PDIA6Q15084 440 aa18.3■□□□□ 0.52
NEIL1-219ENST00000568519 LRP10Q7Z4F1 713 aa18.3■□□□□ 0.52
NEIL1-219ENST00000568519 C10orf71Q711Q0 1435 aa18.3■□□□□ 0.52
NEIL1-219ENST00000568519 ZPR1O75312 459 aa18.29■□□□□ 0.52
NEIL1-219ENST00000568519 EIF2S2P20042 333 aaKnown RBP18.29■□□□□ 0.52
NEIL1-219ENST00000568519 EXOSC9Q06265 439 aaKnown RBP18.29■□□□□ 0.52
NEIL1-219ENST00000568519 NLGN1Q8N2Q7 840 aa18.29■□□□□ 0.52
NEIL1-219ENST00000568519 HYPKQ9NX55 129 aa18.29■□□□□ 0.52
NEIL1-219ENST00000568519 VAMP4O75379 141 aa18.28■□□□□ 0.52
NEIL1-219ENST00000568519 CLEC4GQ6UXB4 293 aa18.28■□□□□ 0.52
NEIL1-219ENST00000568519 TSPYL6Q8N831 410 aa18.28■□□□□ 0.52
NEIL1-219ENST00000568519 ERVV-1B6SEH8 477 aa18.27■□□□□ 0.52
NEIL1-219ENST00000568519 GYS1P13807 737 aa18.27■□□□□ 0.52
NEIL1-219ENST00000568519 C9orf131Q5VYM1 1079 aa18.27■□□□□ 0.52
NEIL1-219ENST00000568519 ARFGEF1Q9Y6D6 1849 aa18.26■□□□□ 0.51
NEIL1-219ENST00000568519 KCNA3P22001 575 aa18.26■□□□□ 0.51
NEIL1-219ENST00000568519 DZIP3Q86Y13 1208 aaKnown RBP18.26■□□□□ 0.51
NEIL1-219ENST00000568519 KLRG1Q96E93 195 aa18.26■□□□□ 0.51
NEIL1-219ENST00000568519 CDCA7LQ96GN5 454 aa18.26■□□□□ 0.51
NEIL1-219ENST00000568519 CHPF2Q9P2E5 772 aa18.26■□□□□ 0.51
NEIL1-219ENST00000568519 ZNF652Q9Y2D9 606 aa18.26■□□□□ 0.51
NEIL1-219ENST00000568519 ELL2O00472 640 aaPredicted RBP18.25■□□□□ 0.51
NEIL1-219ENST00000568519 CAMTA2O94983 1202 aa18.25■□□□□ 0.51
NEIL1-219ENST00000568519 TGFB2P61812 414 aa18.25■□□□□ 0.51
NEIL1-219ENST00000568519 STK31Q9BXU1 1019 aa18.25■□□□□ 0.51
NEIL1-219ENST00000568519 KIF6Q6ZMV9 814 aa18.24■□□□□ 0.51
NEIL1-219ENST00000568519 RBM46Q8TBY0 533 aaKnown RBP18.24■□□□□ 0.51
NEIL1-219ENST00000568519 MAP3K15Q6ZN16 1313 aa18.23■□□□□ 0.51
NEIL1-219ENST00000568519 SBF1O95248 1867 aa18.23■□□□□ 0.51
NEIL1-219ENST00000568519 MYL6BP14649 208 aa18.23■□□□□ 0.51
NEIL1-219ENST00000568519 USPL1Q5W0Q7 1092 aa18.23■□□□□ 0.51
NEIL1-219ENST00000568519 JMYQ8N9B5 988 aa18.23■□□□□ 0.51
NEIL1-219ENST00000568519 PIP4K2AP48426 406 aaPredicted RBP18.22■□□□□ 0.51
NEIL1-219ENST00000568519 PROSER3Q2NL68 480 aa18.22■□□□□ 0.51
NEIL1-219ENST00000568519 BCL2L12Q9HB09 334 aa18.22■□□□□ 0.51
NEIL1-219ENST00000568519 RRAGCQ9HB90 399 aa18.22■□□□□ 0.51
NEIL1-219ENST00000568519 SRP68Q9UHB9 627 aaKnown RBP18.22■□□□□ 0.51
NEIL1-219ENST00000568519 TBC1D2BQ9UPU7 963 aa18.22■□□□□ 0.51
NEIL1-219ENST00000568519 ZNF330Q9Y3S2 320 aaPredicted RBP18.22■□□□□ 0.51
NEIL1-219ENST00000568519 ALDH1L2Q3SY69 923 aa18.21■□□□□ 0.51
NEIL1-219ENST00000568519 NECTIN2Q92692 538 aa18.21■□□□□ 0.51
NEIL1-219ENST00000568519 NUP98P52948 1817 aa18.21■□□□□ 0.51
NEIL1-219ENST00000568519 TM4SF1P30408 202 aa18.2■□□□□ 0.5
NEIL1-219ENST00000568519 FKBP8Q14318 412 aa18.2■□□□□ 0.5
NEIL1-219ENST00000568519 COPS6Q7L5N1 327 aa18.2■□□□□ 0.5
NEIL1-219ENST00000568519 C16orf71Q8IYS4 520 aaPredicted RBP18.2■□□□□ 0.5
NEIL1-219ENST00000568519 PLBD2Q8NHP8 589 aa18.2■□□□□ 0.5
NEIL1-219ENST00000568519 XAGE3Q8WTP9 111 aa18.2■□□□□ 0.5
NEIL1-219ENST00000568519 NRXN2Q9P2S2 1712 aa18.2■□□□□ 0.5
NEIL1-219ENST00000568519 DDX58O95786 925 aaKnown RBP18.19■□□□□ 0.5
NEIL1-219ENST00000568519 CHRNA5P30532 468 aa18.19■□□□□ 0.5
NEIL1-219ENST00000568519 BRPF1P55201 1214 aaPredicted RBP18.19■□□□□ 0.5
NEIL1-219ENST00000568519 HSP90AB3PQ58FF7 597 aa18.19■□□□□ 0.5
NEIL1-219ENST00000568519 GIGYF2Q6Y7W6 1299 aaKnown RBP18.19■□□□□ 0.5
NEIL1-219ENST00000568519 TTLL7Q6ZT98 887 aa18.19■□□□□ 0.5
NEIL1-219ENST00000568519 TNS4Q8IZW8 715 aa18.19■□□□□ 0.5
NEIL1-219ENST00000568519 RNF181Q9P0P0 153 aa18.19■□□□□ 0.5
NEIL1-219ENST00000568519 ANKRD36CQ5JPF3 1778 aa18.19■□□□□ 0.5
NEIL1-219ENST00000568519 CARMIL3Q8ND23 1372 aa18.18■□□□□ 0.5
NEIL1-219ENST00000568519 IBTKQ9P2D0 1353 aaPredicted RBP18.18■□□□□ 0.5
NEIL1-219ENST00000568519 DDR1Q08345 913 aa18.18■□□□□ 0.5
NEIL1-219ENST00000568519 ANKRD13DQ6ZTN6 518 aa18.18■□□□□ 0.5
NEIL1-219ENST00000568519 PARP3Q9Y6F1 533 aa18.18■□□□□ 0.5
NEIL1-219ENST00000568519 ANXA1P04083 346 aa18.17■□□□□ 0.5
NEIL1-219ENST00000568519 SLC4A2P04920 1241 aa18.17■□□□□ 0.5
NEIL1-219ENST00000568519 NFIXQ14938 502 aa18.17■□□□□ 0.5
NEIL1-219ENST00000568519 TNRC6CQ9HCJ0 1690 aaKnown RBP18.17■□□□□ 0.5
NEIL1-219ENST00000568519 ARFGEF2Q9Y6D5 1785 aa18.17■□□□□ 0.5
NEIL1-219ENST00000568519 FSTL1Q12841 308 aa18.16■□□□□ 0.5
NEIL1-219ENST00000568519 POLRMTO00411 1230 aaKnown RBP18.15■□□□□ 0.5
NEIL1-219ENST00000568519 PRELPP51888 382 aa18.15■□□□□ 0.5
NEIL1-219ENST00000568519 RASSF7Q02833 373 aa18.15■□□□□ 0.5
NEIL1-219ENST00000568519 FLIIQ13045 1269 aa18.15■□□□□ 0.5
NEIL1-219ENST00000568519 PARP10Q53GL7 1025 aa18.15■□□□□ 0.5
NEIL1-219ENST00000568519 TBC1D9BQ66K14 1250 aa18.15■□□□□ 0.5
NEIL1-219ENST00000568519 SETDB2Q96T68 719 aa18.15■□□□□ 0.5
NEIL1-219ENST00000568519 PHAXQ9H814 394 aaKnown RBP18.15■□□□□ 0.5
NEIL1-219ENST00000568519 PIM2Q9P1W9 311 aa18.15■□□□□ 0.5
NEIL1-219ENST00000568519 RNF123Q5XPI4 1314 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms