RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 CCDC24Q8N4L8 307 aa18.93■□□□□ 0.62
CMTM3-215ENST00000568477 TTLL6Q8N841 843 aa18.93■□□□□ 0.62
CMTM3-215ENST00000568477 NBPF5PQ86XG9 351 aaPredicted RBP18.92■□□□□ 0.62
CMTM3-215ENST00000568477 ERBB4Q15303 1308 aa18.92■□□□□ 0.62
CMTM3-215ENST00000568477 ANKRD31Q8N7Z5 1873 aa18.91■□□□□ 0.62
CMTM3-215ENST00000568477 C9orf131Q5VYM1 1079 aa18.91■□□□□ 0.62
CMTM3-215ENST00000568477 NGEFQ8N5V2 710 aa18.91■□□□□ 0.62
CMTM3-215ENST00000568477 NIP7Q9Y221 180 aaKnown RBP eCLIP18.91■□□□□ 0.62
CMTM3-215ENST00000568477 MYL6BP14649 208 aa18.9■□□□□ 0.62
CMTM3-215ENST00000568477 KIF6Q6ZMV9 814 aa18.9■□□□□ 0.62
CMTM3-215ENST00000568477 ZNF622Q969S3 477 aaKnown RBP eCLIP18.9■□□□□ 0.62
CMTM3-215ENST00000568477 TRIM35Q9UPQ4 493 aa18.9■□□□□ 0.62
CMTM3-215ENST00000568477 HLFQ16534 295 aa18.89■□□□□ 0.61
CMTM3-215ENST00000568477 ERVV-1B6SEH8 477 aa18.88■□□□□ 0.61
CMTM3-215ENST00000568477 TPTE2Q6XPS3 522 aa18.88■□□□□ 0.61
CMTM3-215ENST00000568477 RNF181Q9P0P0 153 aa18.88■□□□□ 0.61
CMTM3-215ENST00000568477 MAP3K15Q6ZN16 1313 aa18.88■□□□□ 0.61
CMTM3-215ENST00000568477 COL11A2P13942 1736 aaPredicted RBP18.88■□□□□ 0.61
CMTM3-215ENST00000568477 CHL1O00533 1208 aa18.87■□□□□ 0.61
CMTM3-215ENST00000568477 EIF2S2P20042 333 aaKnown RBP18.87■□□□□ 0.61
CMTM3-215ENST00000568477 TTLL7Q6ZT98 887 aa18.87■□□□□ 0.61
CMTM3-215ENST00000568477 LAS1LQ9Y4W2 734 aaKnown RBP18.87■□□□□ 0.61
CMTM3-215ENST00000568477 ZNF316A6NFI3 1004 aaPredicted RBP18.86■□□□□ 0.61
CMTM3-215ENST00000568477 FAM177BA6PVY3 158 aa18.86■□□□□ 0.61
CMTM3-215ENST00000568477 STYK1Q6J9G0 422 aa18.86■□□□□ 0.61
CMTM3-215ENST00000568477 SRGNP10124 158 aa18.85■□□□□ 0.61
CMTM3-215ENST00000568477 RASSF7Q02833 373 aa18.85■□□□□ 0.61
CMTM3-215ENST00000568477 CNKSR1Q969H4 720 aa18.85■□□□□ 0.61
CMTM3-215ENST00000568477 ZBTB3Q9H5J0 574 aa18.85■□□□□ 0.61
CMTM3-215ENST00000568477 APAF1O14727 1248 aa18.84■□□□□ 0.61
CMTM3-215ENST00000568477 GTF2E1P29083 439 aaPredicted RBP18.84■□□□□ 0.61
CMTM3-215ENST00000568477 MASTLQ96GX5 879 aa18.84■□□□□ 0.61
CMTM3-215ENST00000568477 SENP3-EIF4A1A0A087X0R7 540 aa18.83■□□□□ 0.6
CMTM3-215ENST00000568477 PDIA6Q15084 440 aa18.83■□□□□ 0.6
CMTM3-215ENST00000568477 NYXQ9GZU5 481 aa18.83■□□□□ 0.6
CMTM3-215ENST00000568477 ZNF219Q9P2Y4 722 aaPredicted RBP18.83■□□□□ 0.6
CMTM3-215ENST00000568477 NUP98P52948 1817 aa18.82■□□□□ 0.6
CMTM3-215ENST00000568477 NFKBIEO00221 500 aa18.82■□□□□ 0.6
CMTM3-215ENST00000568477 C21orf2O43822 256 aa18.82■□□□□ 0.6
CMTM3-215ENST00000568477 LMNB1P20700 586 aa18.82■□□□□ 0.6
CMTM3-215ENST00000568477 PRPF40BQ6NWY9 871 aaKnown RBP18.82■□□□□ 0.6
CMTM3-215ENST00000568477 LRP10Q7Z4F1 713 aa18.82■□□□□ 0.6
CMTM3-215ENST00000568477 NECTIN2Q92692 538 aa18.82■□□□□ 0.6
CMTM3-215ENST00000568477 CFAP44Q96MT7 982 aa18.82■□□□□ 0.6
CMTM3-215ENST00000568477 SBF1O95248 1867 aa18.82■□□□□ 0.6
CMTM3-215ENST00000568477 ZC3H4Q9UPT8 1303 aaKnown RBP18.81■□□□□ 0.6
CMTM3-215ENST00000568477 KLRG2A4D1S0 409 aaPredicted RBP18.81■□□□□ 0.6
CMTM3-215ENST00000568477 KIF3CO14782 793 aa18.81■□□□□ 0.6
CMTM3-215ENST00000568477 ANXA1P04083 346 aa18.81■□□□□ 0.6
CMTM3-215ENST00000568477 NPR1P16066 1061 aa18.81■□□□□ 0.6
CMTM3-215ENST00000568477 GPTP24298 496 aa18.81■□□□□ 0.6
CMTM3-215ENST00000568477 KRT24Q2M2I5 525 aa18.81■□□□□ 0.6
CMTM3-215ENST00000568477 PROSER3Q2NL68 480 aa18.81■□□□□ 0.6
CMTM3-215ENST00000568477 GIGYF2Q6Y7W6 1299 aaKnown RBP18.81■□□□□ 0.6
CMTM3-215ENST00000568477 IBTKQ9P2D0 1353 aaPredicted RBP18.81■□□□□ 0.6
CMTM3-215ENST00000568477 KDM2BQ8NHM5 1336 aa18.8■□□□□ 0.6
CMTM3-215ENST00000568477 HOXB7P09629 217 aa18.8■□□□□ 0.6
CMTM3-215ENST00000568477 CALD1Q05682 793 aaKnown RBP18.8■□□□□ 0.6
CMTM3-215ENST00000568477 SOGA3Q5TF21 947 aa18.8■□□□□ 0.6
CMTM3-215ENST00000568477 UBN2Q6ZU65 1347 aa18.79■□□□□ 0.6
CMTM3-215ENST00000568477 CCDC184Q52MB2 194 aa18.79■□□□□ 0.6
CMTM3-215ENST00000568477 NUTM1Q86Y26 1132 aa18.79■□□□□ 0.6
CMTM3-215ENST00000568477 ZNF34Q8IZ26 560 aa18.79■□□□□ 0.6
CMTM3-215ENST00000568477 NMRK2Q9NPI5 230 aa18.79■□□□□ 0.6
CMTM3-215ENST00000568477 DDX21Q9NR30 783 aaKnown RBP eCLIP18.79■□□□□ 0.6
CMTM3-215ENST00000568477 ABCC12Q96J65 1359 aa18.79■□□□□ 0.6
CMTM3-215ENST00000568477 SLX4Q8IY92 1834 aa18.79■□□□□ 0.6
CMTM3-215ENST00000568477 ANP32CO43423 234 aa18.78■□□□□ 0.6
CMTM3-215ENST00000568477 PRELPP51888 382 aa18.78■□□□□ 0.6
CMTM3-215ENST00000568477 PARP10Q53GL7 1025 aa18.78■□□□□ 0.6
CMTM3-215ENST00000568477 HDGFL1Q5TGJ6 251 aa18.78■□□□□ 0.6
CMTM3-215ENST00000568477 XAGE3Q8WTP9 111 aa18.78■□□□□ 0.6
CMTM3-215ENST00000568477 MBIPQ9NS73 344 aa18.78■□□□□ 0.6
CMTM3-215ENST00000568477 IFT57Q9NWB7 429 aa18.78■□□□□ 0.6
CMTM3-215ENST00000568477 ARFGEF2Q9Y6D5 1785 aa18.78■□□□□ 0.6
CMTM3-215ENST00000568477 GNAI1P63096 354 aa18.77■□□□□ 0.6
CMTM3-215ENST00000568477 AIMP1Q12904 312 aaKnown RBP18.77■□□□□ 0.6
CMTM3-215ENST00000568477 ERFEQ4G0M1 354 aa18.77■□□□□ 0.6
CMTM3-215ENST00000568477 SUSD4Q5VX71 490 aa18.77■□□□□ 0.6
CMTM3-215ENST00000568477 COPS6Q7L5N1 327 aa18.77■□□□□ 0.6
CMTM3-215ENST00000568477 TAOK3Q9H2K8 898 aa18.77■□□□□ 0.6
CMTM3-215ENST00000568477 CACNA1SQ13698 1873 aa18.77■□□□□ 0.6
CMTM3-215ENST00000568477 LTBP3Q9NS15 1303 aa18.76■□□□□ 0.59
CMTM3-215ENST00000568477 RIC1Q4ADV7 1423 aa18.76■□□□□ 0.59
CMTM3-215ENST00000568477 NTSR2O95665 410 aa18.76■□□□□ 0.59
CMTM3-215ENST00000568477 ZNF853P0CG23 659 aa18.76■□□□□ 0.59
CMTM3-215ENST00000568477 HSP90AB3PQ58FF7 597 aa18.76■□□□□ 0.59
CMTM3-215ENST00000568477 DUSP27Q5VZP5 1158 aa18.76■□□□□ 0.59
CMTM3-215ENST00000568477 PPP1R42Q7Z4L9 355 aa18.76■□□□□ 0.59
CMTM3-215ENST00000568477 CHPF2Q9P2E5 772 aa18.76■□□□□ 0.59
CMTM3-215ENST00000568477 FER1L6Q2WGJ9 1857 aa18.75■□□□□ 0.59
CMTM3-215ENST00000568477 CRY2Q49AN0 593 aa18.75■□□□□ 0.59
CMTM3-215ENST00000568477 CCDC93Q567U6 631 aa18.75■□□□□ 0.59
CMTM3-215ENST00000568477 MRS2Q9HD23 443 aa18.75■□□□□ 0.59
CMTM3-215ENST00000568477 TNRC6CQ9HCJ0 1690 aaKnown RBP18.75■□□□□ 0.59
CMTM3-215ENST00000568477 TOMM70O94826 608 aa18.74■□□□□ 0.59
CMTM3-215ENST00000568477 ALDH1B1P30837 517 aa18.74■□□□□ 0.59
CMTM3-215ENST00000568477 C7orf43Q8WVR3 580 aa18.74■□□□□ 0.59
CMTM3-215ENST00000568477 DBF4Q9UBU7 674 aaPredicted RBP18.74■□□□□ 0.59
CMTM3-215ENST00000568477 TIAM2Q8IVF5 1701 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms