RNA–Protein interactions for RNA: ENST00000568292.1

CDH3-207, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-207ENST00000568292 NBPF5PQ86XG9 351 aaPredicted RBP13.39□□□□□ -0.27
CDH3-207ENST00000568292 TTLL6Q8N841 843 aa13.39□□□□□ -0.27
CDH3-207ENST00000568292 CNBD1Q8NA66 436 aa13.39□□□□□ -0.27
CDH3-207ENST00000568292 MAP3K15Q6ZN16 1313 aa13.39□□□□□ -0.27
CDH3-207ENST00000568292 KDM3BQ7LBC6 1761 aa13.38□□□□□ -0.27
CDH3-207ENST00000568292 ZNF853P0CG23 659 aa13.38□□□□□ -0.27
CDH3-207ENST00000568292 PDIA6Q15084 440 aa13.38□□□□□ -0.27
CDH3-207ENST00000568292 TTLL7Q6ZT98 887 aa13.38□□□□□ -0.27
CDH3-207ENST00000568292 CCDC24Q8N4L8 307 aa13.38□□□□□ -0.27
CDH3-207ENST00000568292 NECTIN2Q92692 538 aa13.38□□□□□ -0.27
CDH3-207ENST00000568292 ZNF622Q969S3 477 aaKnown RBP eCLIP13.38□□□□□ -0.27
CDH3-207ENST00000568292 IFT57Q9NWB7 429 aa13.38□□□□□ -0.27
CDH3-207ENST00000568292 N4BP2Q86UW6 1770 aaPredicted RBP13.37□□□□□ -0.27
CDH3-207ENST00000568292 CHD4Q14839 1912 aa13.37□□□□□ -0.27
CDH3-207ENST00000568292 HOXB7P09629 217 aa13.37□□□□□ -0.27
CDH3-207ENST00000568292 GTF2E1P29083 439 aaPredicted RBP13.37□□□□□ -0.27
CDH3-207ENST00000568292 FAM177BA6PVY3 158 aa13.36□□□□□ -0.27
CDH3-207ENST00000568292 KRT24Q2M2I5 525 aa13.36□□□□□ -0.27
CDH3-207ENST00000568292 GIGYF2Q6Y7W6 1299 aaKnown RBP13.36□□□□□ -0.27
CDH3-207ENST00000568292 NYXQ9GZU5 481 aa13.36□□□□□ -0.27
CDH3-207ENST00000568292 ZBTB3Q9H5J0 574 aa13.36□□□□□ -0.27
CDH3-207ENST00000568292 DDX21Q9NR30 783 aaKnown RBP eCLIP13.36□□□□□ -0.27
CDH3-207ENST00000568292 MBIPQ9NS73 344 aa13.36□□□□□ -0.27
CDH3-207ENST00000568292 AIMP1Q12904 312 aaKnown RBP13.35□□□□□ -0.27
CDH3-207ENST00000568292 CCDC27Q2M243 656 aa13.35□□□□□ -0.27
CDH3-207ENST00000568292 NCBP3Q53F19 620 aaKnown RBP13.35□□□□□ -0.27
CDH3-207ENST00000568292 DUSP27Q5VZP5 1158 aa13.35□□□□□ -0.27
CDH3-207ENST00000568292 STYK1Q6J9G0 422 aa13.35□□□□□ -0.27
CDH3-207ENST00000568292 COPS6Q7L5N1 327 aa13.35□□□□□ -0.27
CDH3-207ENST00000568292 CNKSR1Q969H4 720 aa13.35□□□□□ -0.27
CDH3-207ENST00000568292 MASTLQ96GX5 879 aa13.35□□□□□ -0.27
CDH3-207ENST00000568292 CHMP4AQ9BY43 222 aa13.35□□□□□ -0.27
CDH3-207ENST00000568292 NRXN2Q9P2S2 1712 aa13.35□□□□□ -0.27
CDH3-207ENST00000568292 KIAA1551Q9HCM1 1747 aa13.34□□□□□ -0.27
CDH3-207ENST00000568292 ANXA1P04083 346 aa13.34□□□□□ -0.27
CDH3-207ENST00000568292 SRGNP10124 158 aa13.34□□□□□ -0.27
CDH3-207ENST00000568292 PROSER3Q2NL68 480 aa13.34□□□□□ -0.27
CDH3-207ENST00000568292 HDGFL1Q5TGJ6 251 aa13.34□□□□□ -0.27
CDH3-207ENST00000568292 LRP10Q7Z4F1 713 aa13.34□□□□□ -0.27
CDH3-207ENST00000568292 PPP1R42Q7Z4L9 355 aa13.34□□□□□ -0.27
CDH3-207ENST00000568292 ZNF34Q8IZ26 560 aa13.34□□□□□ -0.27
CDH3-207ENST00000568292 DBF4Q9UBU7 674 aaPredicted RBP13.34□□□□□ -0.27
CDH3-207ENST00000568292 AFDNP55196 1824 aaKnown RBP13.34□□□□□ -0.27
CDH3-207ENST00000568292 PARP10Q53GL7 1025 aa13.33□□□□□ -0.28
CDH3-207ENST00000568292 C9orf131Q5VYM1 1079 aa13.33□□□□□ -0.28
CDH3-207ENST00000568292 WWC1Q8IX03 1113 aa13.33□□□□□ -0.28
CDH3-207ENST00000568292 XAGE3Q8WTP9 111 aa13.33□□□□□ -0.28
CDH3-207ENST00000568292 SCN7AQ01118 1682 aa13.33□□□□□ -0.28
CDH3-207ENST00000568292 KLRG2A4D1S0 409 aaPredicted RBP13.32□□□□□ -0.28
CDH3-207ENST00000568292 ELL2O00472 640 aaPredicted RBP13.32□□□□□ -0.28
CDH3-207ENST00000568292 NPR1P16066 1061 aa13.32□□□□□ -0.28
CDH3-207ENST00000568292 GPTP24298 496 aa13.32□□□□□ -0.28
CDH3-207ENST00000568292 HSP90AB3PQ58FF7 597 aa13.32□□□□□ -0.28
CDH3-207ENST00000568292 SUSD4Q5VX71 490 aa13.32□□□□□ -0.28
CDH3-207ENST00000568292 FAM9BQ8IZU0 186 aa13.32□□□□□ -0.28
CDH3-207ENST00000568292 GPBP1L1Q9HC44 474 aaPredicted RBP13.32□□□□□ -0.28
CDH3-207ENST00000568292 HYPKQ9NX55 129 aa13.32□□□□□ -0.28
CDH3-207ENST00000568292 CHPF2Q9P2E5 772 aa13.32□□□□□ -0.28
CDH3-207ENST00000568292 LAMB4A4D0S4 1761 aa13.32□□□□□ -0.28
CDH3-207ENST00000568292 C21orf2O43822 256 aa13.31□□□□□ -0.28
CDH3-207ENST00000568292 ALDH1B1P30837 517 aa13.31□□□□□ -0.28
CDH3-207ENST00000568292 ANKRD13DQ6ZTN6 518 aa13.31□□□□□ -0.28
CDH3-207ENST00000568292 ZNF219Q9P2Y4 722 aaPredicted RBP13.31□□□□□ -0.28
CDH3-207ENST00000568292 ATP10DQ9P241 1426 aa13.3□□□□□ -0.28
CDH3-207ENST00000568292 BCORQ6W2J9 1755 aa13.3□□□□□ -0.28
CDH3-207ENST00000568292 SENP3-EIF4A1A0A087X0R7 540 aa13.3□□□□□ -0.28
CDH3-207ENST00000568292 TCIRG1Q13488 830 aa13.3□□□□□ -0.28
CDH3-207ENST00000568292 ERFEQ4G0M1 354 aa13.3□□□□□ -0.28
CDH3-207ENST00000568292 SOGA3Q5TF21 947 aa13.3□□□□□ -0.28
CDH3-207ENST00000568292 NUTM1Q86Y26 1132 aa13.3□□□□□ -0.28
CDH3-207ENST00000568292 C8orf58Q8NAV2 365 aa13.3□□□□□ -0.28
CDH3-207ENST00000568292 PLBD2Q8NHP8 589 aa13.3□□□□□ -0.28
CDH3-207ENST00000568292 ZNF526Q8TF50 670 aaPredicted RBP13.3□□□□□ -0.28
CDH3-207ENST00000568292 UTP14AQ9BVJ6 771 aaKnown RBP13.3□□□□□ -0.28
CDH3-207ENST00000568292 RNF181Q9P0P0 153 aa13.3□□□□□ -0.28
CDH3-207ENST00000568292 SALL2Q9Y467 1007 aaPredicted RBP13.3□□□□□ -0.28
CDH3-207ENST00000568292 IL16Q14005 1332 aa13.3□□□□□ -0.28
CDH3-207ENST00000568292 LMNB1P20700 586 aa13.29□□□□□ -0.28
CDH3-207ENST00000568292 CCDC30Q5VVM6 783 aa13.29□□□□□ -0.28
CDH3-207ENST00000568292 WDR63Q8IWG1 891 aa13.29□□□□□ -0.28
CDH3-207ENST00000568292 UBN2Q6ZU65 1347 aa13.29□□□□□ -0.28
CDH3-207ENST00000568292 ADCY9O60503 1353 aa13.29□□□□□ -0.28
CDH3-207ENST00000568292 NTSR2O95665 410 aa13.28□□□□□ -0.28
CDH3-207ENST00000568292 SLC10A5Q5PT55 438 aa13.28□□□□□ -0.28
CDH3-207ENST00000568292 PRPF40BQ6NWY9 871 aaKnown RBP13.28□□□□□ -0.28
CDH3-207ENST00000568292 NLRP3Q96P20 1036 aa13.28□□□□□ -0.28
CDH3-207ENST00000568292 IBTKQ9P2D0 1353 aaPredicted RBP13.28□□□□□ -0.28
CDH3-207ENST00000568292 BRCA1P38398 1863 aaKnown RBP13.27□□□□□ -0.28
CDH3-207ENST00000568292 C1QTNF8P60827 252 aa13.27□□□□□ -0.29
CDH3-207ENST00000568292 RASSF7Q02833 373 aa13.27□□□□□ -0.29
CDH3-207ENST00000568292 NLRP10Q86W26 655 aa13.27□□□□□ -0.29
CDH3-207ENST00000568292 ARFGEF1Q9Y6D6 1849 aa13.27□□□□□ -0.29
CDH3-207ENST00000568292 CRY2Q49AN0 593 aa13.26□□□□□ -0.29
CDH3-207ENST00000568292 RNF123Q5XPI4 1314 aa13.26□□□□□ -0.29
CDH3-207ENST00000568292 RIC3Q7Z5B4 369 aa13.26□□□□□ -0.29
CDH3-207ENST00000568292 TSPYL6Q8N831 410 aa13.26□□□□□ -0.29
CDH3-207ENST00000568292 C7orf43Q8WVR3 580 aa13.26□□□□□ -0.29
CDH3-207ENST00000568292 RPGRQ92834 1020 aaKnown RBP13.26□□□□□ -0.29
CDH3-207ENST00000568292 TSR2Q969E8 191 aaKnown RBP13.26□□□□□ -0.29
CDH3-207ENST00000568292 RBM17Q96I25 401 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms