RNA–Protein interactions for RNA: ENST00000565848.1

NR4A1-221, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 2

Gene NR4A1, Length 691 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-221ENST00000565848 PROSER3Q2NL68 480 aa15.92■□□□□ 0.14
NR4A1-221ENST00000565848 CCDC87Q9NVE4 849 aa15.91■□□□□ 0.14
NR4A1-221ENST00000565848 ZBTB1Q9Y2K1 713 aa15.91■□□□□ 0.14
NR4A1-221ENST00000565848 CD2APQ9Y5K6 639 aa15.91■□□□□ 0.14
NR4A1-221ENST00000565848 C4AP0C0L4 1744 aa15.91■□□□□ 0.14
NR4A1-221ENST00000565848 BCORQ6W2J9 1755 aa15.9■□□□□ 0.14
NR4A1-221ENST00000565848 EIF5P55010 431 aaKnown RBP15.9■□□□□ 0.14
NR4A1-221ENST00000565848 G2E3Q7L622 706 aa15.9■□□□□ 0.14
NR4A1-221ENST00000565848 ARHGAP45Q92619 1136 aa15.9■□□□□ 0.14
NR4A1-221ENST00000565848 BCL2L13Q9BXK5 485 aa15.9■□□□□ 0.14
NR4A1-221ENST00000565848 SMC4Q9NTJ3 1288 aa15.9■□□□□ 0.14
NR4A1-221ENST00000565848 HYPKQ9NX55 129 aa15.9■□□□□ 0.14
NR4A1-221ENST00000565848 KIF16BQ96L93 1317 aa15.9■□□□□ 0.14
NR4A1-221ENST00000565848 TCERG1O14776 1098 aaKnown RBP15.89■□□□□ 0.13
NR4A1-221ENST00000565848 CAPN15O75808 1086 aa15.89■□□□□ 0.13
NR4A1-221ENST00000565848 IL6STP40189 918 aaPredicted RBP15.89■□□□□ 0.13
NR4A1-221ENST00000565848 NECTIN2Q92692 538 aa15.89■□□□□ 0.13
NR4A1-221ENST00000565848 STK31Q9BXU1 1019 aa15.89■□□□□ 0.13
NR4A1-221ENST00000565848 ARFGEF2Q9Y6D5 1785 aa15.89■□□□□ 0.13
NR4A1-221ENST00000565848 ANXA1P04083 346 aa15.88■□□□□ 0.13
NR4A1-221ENST00000565848 HMGB2P26583 209 aaKnown RBP15.88■□□□□ 0.13
NR4A1-221ENST00000565848 PHAXQ9H814 394 aaKnown RBP15.88■□□□□ 0.13
NR4A1-221ENST00000565848 SCN7AQ01118 1682 aa15.88■□□□□ 0.13
NR4A1-221ENST00000565848 PTPRCP08575 1304 aa15.88■□□□□ 0.13
NR4A1-221ENST00000565848 RPS6KA4O75676 772 aa15.87■□□□□ 0.13
NR4A1-221ENST00000565848 PIP4K2AP48426 406 aaPredicted RBP15.87■□□□□ 0.13
NR4A1-221ENST00000565848 FLIIQ13045 1269 aa15.87■□□□□ 0.13
NR4A1-221ENST00000565848 AMIGO3Q86WK7 504 aa15.87■□□□□ 0.13
NR4A1-221ENST00000565848 PXDNLA1KZ92 1463 aa15.86■□□□□ 0.13
NR4A1-221ENST00000565848 KIF3CO14782 793 aa15.86■□□□□ 0.13
NR4A1-221ENST00000565848 APLP1P51693 650 aa15.86■□□□□ 0.13
NR4A1-221ENST00000565848 RRP1P56182 461 aaKnown RBP15.86■□□□□ 0.13
NR4A1-221ENST00000565848 ADCY9O60503 1353 aa15.86■□□□□ 0.13
NR4A1-221ENST00000565848 ANKRD36CQ5JPF3 1778 aa15.85■□□□□ 0.13
NR4A1-221ENST00000565848 SMIM5Q71RC9 77 aa15.85■□□□□ 0.13
NR4A1-221ENST00000565848 FOXD4L1Q9NU39 408 aa15.85■□□□□ 0.13
NR4A1-221ENST00000565848 NOB1Q9ULX3 412 aaKnown RBP15.85■□□□□ 0.13
NR4A1-221ENST00000565848 COL15A1P39059 1388 aa15.85■□□□□ 0.13
NR4A1-221ENST00000565848 IBTKQ9P2D0 1353 aaPredicted RBP15.85■□□□□ 0.13
NR4A1-221ENST00000565848 NUP98P52948 1817 aa15.84■□□□□ 0.13
NR4A1-221ENST00000565848 RGL2O15211 777 aa15.84■□□□□ 0.13
NR4A1-221ENST00000565848 PHF14O94880 888 aa15.84■□□□□ 0.13
NR4A1-221ENST00000565848 TRIM27P14373 513 aa15.84■□□□□ 0.13
NR4A1-221ENST00000565848 MYL6BP14649 208 aa15.84■□□□□ 0.13
NR4A1-221ENST00000565848 ATF7IPQ6VMQ6 1270 aa15.84■□□□□ 0.13
NR4A1-221ENST00000565848 COPS6Q7L5N1 327 aa15.84■□□□□ 0.13
NR4A1-221ENST00000565848 XAGE3Q8WTP9 111 aa15.84■□□□□ 0.13
NR4A1-221ENST00000565848 SUPT16HQ9Y5B9 1047 aaKnown RBP15.84■□□□□ 0.13
NR4A1-221ENST00000565848 ABCC4O15439 1325 aa15.84■□□□□ 0.13
NR4A1-221ENST00000565848 CANXP27824 592 aaKnown RBP15.83■□□□□ 0.12
NR4A1-221ENST00000565848 TTLL7Q6ZT98 887 aa15.83■□□□□ 0.12
NR4A1-221ENST00000565848 FLAD1Q8NFF5 587 aa15.83■□□□□ 0.12
NR4A1-221ENST00000565848 IPO8O15397 1037 aaKnown RBP15.82■□□□□ 0.12
NR4A1-221ENST00000565848 SSFA2P28290 1259 aa15.82■□□□□ 0.12
NR4A1-221ENST00000565848 PDE3AQ14432 1141 aa15.82■□□□□ 0.12
NR4A1-221ENST00000565848 ZKSCAN2Q63HK3 967 aa15.82■□□□□ 0.12
NR4A1-221ENST00000565848 DNAJC5GQ8N7S2 189 aa15.82■□□□□ 0.12
NR4A1-221ENST00000565848 PLBD2Q8NHP8 589 aa15.82■□□□□ 0.12
NR4A1-221ENST00000565848 TNNQ9UQP3 1299 aa15.82■□□□□ 0.12
NR4A1-221ENST00000565848 GNPATO15228 680 aa15.81■□□□□ 0.12
NR4A1-221ENST00000565848 PLIN1O60240 522 aa15.81■□□□□ 0.12
NR4A1-221ENST00000565848 KSR2Q6VAB6 950 aa15.81■□□□□ 0.12
NR4A1-221ENST00000565848 AK7Q96M32 723 aa15.81■□□□□ 0.12
NR4A1-221ENST00000565848 API5Q9BZZ5 524 aaKnown RBP15.81■□□□□ 0.12
NR4A1-221ENST00000565848 MAP3K15Q6ZN16 1313 aa15.8■□□□□ 0.12
NR4A1-221ENST00000565848 PI4KAP2A4QPH2 592 aa15.8■□□□□ 0.12
NR4A1-221ENST00000565848 ERVV-1B6SEH8 477 aa15.8■□□□□ 0.12
NR4A1-221ENST00000565848 RLBP1P12271 317 aa15.8■□□□□ 0.12
NR4A1-221ENST00000565848 COL13A1Q5TAT6 717 aaPredicted RBP15.8■□□□□ 0.12
NR4A1-221ENST00000565848 ANKRD13DQ6ZTN6 518 aa15.8■□□□□ 0.12
NR4A1-221ENST00000565848 PI4KAP1Q8N8J0 262 aa15.8■□□□□ 0.12
NR4A1-221ENST00000565848 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.8■□□□□ 0.12
NR4A1-221ENST00000565848 RTCBQ9Y3I0 505 aaKnown RBP15.8■□□□□ 0.12
NR4A1-221ENST00000565848 COL24A1Q17RW2 1714 aa15.8■□□□□ 0.12
NR4A1-221ENST00000565848 ZBTB22O15209 634 aa15.79■□□□□ 0.12
NR4A1-221ENST00000565848 TOMM70O94826 608 aa15.79■□□□□ 0.12
NR4A1-221ENST00000565848 CAMTA2O94983 1202 aa15.79■□□□□ 0.12
NR4A1-221ENST00000565848 HTRA3P83110 453 aa15.79■□□□□ 0.12
NR4A1-221ENST00000565848 FKBP5Q13451 457 aaPredicted RBP15.79■□□□□ 0.12
NR4A1-221ENST00000565848 C20orf194Q5TEA3 1177 aa15.79■□□□□ 0.12
NR4A1-221ENST00000565848 INTS3Q68E01 1043 aaKnown RBP15.79■□□□□ 0.12
NR4A1-221ENST00000565848 DZIP3Q86Y13 1208 aaKnown RBP15.79■□□□□ 0.12
NR4A1-221ENST00000565848 FRAT1Q92837 279 aaPredicted RBP15.79■□□□□ 0.12
NR4A1-221ENST00000565848 ARHGEF1Q92888 912 aaKnown RBP15.79■□□□□ 0.12
NR4A1-221ENST00000565848 USP42Q9H9J4 1324 aaKnown RBP15.78■□□□□ 0.12
NR4A1-221ENST00000565848 A0A087WZG4 1122 aa15.78■□□□□ 0.12
NR4A1-221ENST00000565848 F6X3S4 739 aa15.78■□□□□ 0.12
NR4A1-221ENST00000565848 DDX58O95786 925 aaKnown RBP15.78■□□□□ 0.12
NR4A1-221ENST00000565848 GIGYF2Q6Y7W6 1299 aaKnown RBP15.78■□□□□ 0.12
NR4A1-221ENST00000565848 DNAAF4Q8WXU2 420 aa15.78■□□□□ 0.12
NR4A1-221ENST00000565848 BCL2L12Q9HB09 334 aa15.78■□□□□ 0.12
NR4A1-221ENST00000565848 NARFQ9UHQ1 456 aa15.78■□□□□ 0.12
NR4A1-221ENST00000565848 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.77■□□□□ 0.12
NR4A1-221ENST00000565848 AIMP1Q12904 312 aaKnown RBP15.77■□□□□ 0.12
NR4A1-221ENST00000565848 BEND3Q5T5X7 828 aa15.77■□□□□ 0.12
NR4A1-221ENST00000565848 ARHGAP27Q6ZUM4 889 aa15.77■□□□□ 0.12
NR4A1-221ENST00000565848 DZIP1LQ8IYY4 767 aaKnown RBP15.77■□□□□ 0.12
NR4A1-221ENST00000565848 METTL22Q9BUU2 404 aaPredicted RBP15.77■□□□□ 0.12
NR4A1-221ENST00000565848 MAP3K2Q9Y2U5 619 aa15.77■□□□□ 0.12
NR4A1-221ENST00000565848 AFDNP55196 1824 aaKnown RBP15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms