RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 BABAM1Q9NWV8 329 aa26.16■■□□□ 1.78
CLN6-206ENST00000565471 ZC3H4Q9UPT8 1303 aaKnown RBP26.15■■□□□ 1.78
CLN6-206ENST00000565471 ZNF622Q969S3 477 aaKnown RBP eCLIP26.15■■□□□ 1.78
CLN6-206ENST00000565471 RASSF7Q02833 373 aa26.14■■□□□ 1.78
CLN6-206ENST00000565471 TSPYL4Q9UJ04 414 aa26.14■■□□□ 1.78
CLN6-206ENST00000565471 NIP7Q9Y221 180 aaKnown RBP eCLIP26.14■■□□□ 1.78
CLN6-206ENST00000565471 ERBB4Q15303 1308 aa26.14■■□□□ 1.77
CLN6-206ENST00000565471 LMNB1P20700 586 aa26.13■■□□□ 1.77
CLN6-206ENST00000565471 STYK1Q6J9G0 422 aa26.13■■□□□ 1.77
CLN6-206ENST00000565471 ERVV-1B6SEH8 477 aa26.12■■□□□ 1.77
CLN6-206ENST00000565471 SRGNP10124 158 aa26.12■■□□□ 1.77
CLN6-206ENST00000565471 WDR43Q15061 677 aaKnown RBP eCLIP26.12■■□□□ 1.77
CLN6-206ENST00000565471 HLFQ16534 295 aa26.12■■□□□ 1.77
CLN6-206ENST00000565471 TPTE2Q6XPS3 522 aa26.12■■□□□ 1.77
CLN6-206ENST00000565471 CNKSR1Q969H4 720 aa26.12■■□□□ 1.77
CLN6-206ENST00000565471 PRKRIP1Q9H875 184 aaPredicted RBP26.12■■□□□ 1.77
CLN6-206ENST00000565471 NMRK2Q9NPI5 230 aa26.12■■□□□ 1.77
CLN6-206ENST00000565471 KDM2BQ8NHM5 1336 aa26.12■■□□□ 1.77
CLN6-206ENST00000565471 RUNDC1Q96C34 613 aa26.11■■□□□ 1.77
CLN6-206ENST00000565471 MASTLQ96GX5 879 aa26.11■■□□□ 1.77
CLN6-206ENST00000565471 ARFGEF2Q9Y6D5 1785 aa26.1■■□□□ 1.77
CLN6-206ENST00000565471 NFKBIEO00221 500 aa26.1■■□□□ 1.77
CLN6-206ENST00000565471 TOMM70O94826 608 aa26.1■■□□□ 1.77
CLN6-206ENST00000565471 CCDC146Q8IYE0 955 aa26.1■■□□□ 1.77
CLN6-206ENST00000565471 RRP7AQ9Y3A4 280 aaKnown RBP26.1■■□□□ 1.77
CLN6-206ENST00000565471 MAP3K15Q6ZN16 1313 aa26.1■■□□□ 1.77
CLN6-206ENST00000565471 HSPA6P17066 643 aa26.09■■□□□ 1.77
CLN6-206ENST00000565471 PRELPP51888 382 aa26.09■■□□□ 1.77
CLN6-206ENST00000565471 KIF6Q6ZMV9 814 aa26.09■■□□□ 1.77
CLN6-206ENST00000565471 KLRG2A4D1S0 409 aaPredicted RBP26.08■■□□□ 1.77
CLN6-206ENST00000565471 C21orf2O43822 256 aa26.08■■□□□ 1.77
CLN6-206ENST00000565471 NGEFQ8N5V2 710 aa26.08■■□□□ 1.77
CLN6-206ENST00000565471 FER1L6Q2WGJ9 1857 aa26.08■■□□□ 1.77
CLN6-206ENST00000565471 NUP98P52948 1817 aa26.07■■□□□ 1.76
CLN6-206ENST00000565471 TNRC6CQ9HCJ0 1690 aaKnown RBP26.07■■□□□ 1.76
CLN6-206ENST00000565471 MYL6BP14649 208 aa26.07■■□□□ 1.76
CLN6-206ENST00000565471 TTLL7Q6ZT98 887 aa26.07■■□□□ 1.76
CLN6-206ENST00000565471 SLX4Q8IY92 1834 aa26.07■■□□□ 1.76
CLN6-206ENST00000565471 PRPF40BQ6NWY9 871 aaKnown RBP26.06■■□□□ 1.76
CLN6-206ENST00000565471 ADAMTS8Q9UP79 889 aa26.06■■□□□ 1.76
CLN6-206ENST00000565471 LTBP3Q9NS15 1303 aa26.06■■□□□ 1.76
CLN6-206ENST00000565471 TIAM2Q8IVF5 1701 aa26.05■■□□□ 1.76
CLN6-206ENST00000565471 CCDC88AQ3V6T2 1871 aa26.05■■□□□ 1.76
CLN6-206ENST00000565471 NPR1P16066 1061 aa26.05■■□□□ 1.76
CLN6-206ENST00000565471 NEUROD2Q15784 382 aa26.05■■□□□ 1.76
CLN6-206ENST00000565471 SOGA3Q5TF21 947 aa26.05■■□□□ 1.76
CLN6-206ENST00000565471 CACNA1SQ13698 1873 aa26.04■■□□□ 1.76
CLN6-206ENST00000565471 NYXQ9GZU5 481 aa26.04■■□□□ 1.76
CLN6-206ENST00000565471 ZNF219Q9P2Y4 722 aaPredicted RBP26.04■■□□□ 1.76
CLN6-206ENST00000565471 TRIM35Q9UPQ4 493 aa26.04■■□□□ 1.76
CLN6-206ENST00000565471 IBTKQ9P2D0 1353 aaPredicted RBP26.04■■□□□ 1.76
CLN6-206ENST00000565471 FAM177BA6PVY3 158 aa26.03■■□□□ 1.76
CLN6-206ENST00000565471 CHL1O00533 1208 aa26.02■■□□□ 1.76
CLN6-206ENST00000565471 GTF2E1P29083 439 aaPredicted RBP26.02■■□□□ 1.76
CLN6-206ENST00000565471 PDIA6Q15084 440 aa26.02■■□□□ 1.76
CLN6-206ENST00000565471 LRP10Q7Z4F1 713 aa26.02■■□□□ 1.76
CLN6-206ENST00000565471 RBM46Q8TBY0 533 aaKnown RBP26.02■■□□□ 1.76
CLN6-206ENST00000565471 TAOK3Q9H2K8 898 aa26.02■■□□□ 1.76
CLN6-206ENST00000565471 ZBTB3Q9H5J0 574 aa26.02■■□□□ 1.76
CLN6-206ENST00000565471 GLTPD2A6NH11 291 aa26.01■■□□□ 1.75
CLN6-206ENST00000565471 EIF2S2P20042 333 aaKnown RBP26.01■■□□□ 1.75
CLN6-206ENST00000565471 C16orf71Q8IYS4 520 aaPredicted RBP26.01■■□□□ 1.75
CLN6-206ENST00000565471 DICER1Q9UPY3 1922 aaKnown RBP26.01■■□□□ 1.75
CLN6-206ENST00000565471 RIC1Q4ADV7 1423 aa26■■□□□ 1.75
CLN6-206ENST00000565471 GIGYF2Q6Y7W6 1299 aaKnown RBP26■■□□□ 1.75
CLN6-206ENST00000565471 C7orf43Q8WVR3 580 aa26■■□□□ 1.75
CLN6-206ENST00000565471 RRAGCQ9HB90 399 aa26■■□□□ 1.75
CLN6-206ENST00000565471 UBN2Q6ZU65 1347 aa25.99■■□□□ 1.75
CLN6-206ENST00000565471 ZNF34Q8IZ26 560 aa25.99■■□□□ 1.75
CLN6-206ENST00000565471 ABCC12Q96J65 1359 aa25.98■■□□□ 1.75
CLN6-206ENST00000565471 CRY2Q49AN0 593 aa25.98■■□□□ 1.75
CLN6-206ENST00000565471 GPTP24298 496 aa25.97■■□□□ 1.75
CLN6-206ENST00000565471 ZEB1P37275 1124 aaPredicted RBP25.97■■□□□ 1.75
CLN6-206ENST00000565471 PROSER3Q2NL68 480 aa25.97■■□□□ 1.75
CLN6-206ENST00000565471 ERFEQ4G0M1 354 aa25.97■■□□□ 1.75
CLN6-206ENST00000565471 CCDC93Q567U6 631 aa25.97■■□□□ 1.75
CLN6-206ENST00000565471 NUTM1Q86Y26 1132 aa25.97■■□□□ 1.75
CLN6-206ENST00000565471 ALDH1B1P30837 517 aa25.96■■□□□ 1.75
CLN6-206ENST00000565471 APLP1P51693 650 aa25.95■■□□□ 1.74
CLN6-206ENST00000565471 FSTL1Q12841 308 aa25.95■■□□□ 1.74
CLN6-206ENST00000565471 PARP10Q53GL7 1025 aa25.95■■□□□ 1.74
CLN6-206ENST00000565471 SUSD4Q5VX71 490 aa25.95■■□□□ 1.74
CLN6-206ENST00000565471 DPY19L2Q6NUT2 758 aa25.95■■□□□ 1.74
CLN6-206ENST00000565471 LAS1LQ9Y4W2 734 aaKnown RBP25.95■■□□□ 1.74
CLN6-206ENST00000565471 ANXA1P04083 346 aa25.94■■□□□ 1.74
CLN6-206ENST00000565471 HOXB7P09629 217 aa25.94■■□□□ 1.74
CLN6-206ENST00000565471 VEGFAP15692 232 aaPredicted RBP25.94■■□□□ 1.74
CLN6-206ENST00000565471 CFAP44Q96MT7 982 aa25.94■■□□□ 1.74
CLN6-206ENST00000565471 DDX21Q9NR30 783 aaKnown RBP eCLIP25.94■■□□□ 1.74
CLN6-206ENST00000565471 NTSR2O95665 410 aa25.93■■□□□ 1.74
CLN6-206ENST00000565471 KRT24Q2M2I5 525 aa25.93■■□□□ 1.74
CLN6-206ENST00000565471 PPP1R42Q7Z4L9 355 aa25.93■■□□□ 1.74
CLN6-206ENST00000565471 WDR90Q96KV7 1748 aa25.93■■□□□ 1.74
CLN6-206ENST00000565471 RTKN2Q8IZC4 609 aa25.92■■□□□ 1.74
CLN6-206ENST00000565471 HOXA10P31260 410 aaPredicted RBP25.91■■□□□ 1.74
CLN6-206ENST00000565471 FKBP4Q02790 459 aaKnown RBP eCLIP25.91■■□□□ 1.74
CLN6-206ENST00000565471 COPS6Q7L5N1 327 aa25.91■■□□□ 1.74
CLN6-206ENST00000565471 NECTIN2Q92692 538 aa25.91■■□□□ 1.74
CLN6-206ENST00000565471 ANKRD36CQ5JPF3 1778 aa25.9■■□□□ 1.74
CLN6-206ENST00000565471 APAF1O14727 1248 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms