RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 PNNQ9H307 717 aaKnown RBP19.43■□□□□ 0.7
USB1-210ENST00000565151 ADAMTS8Q9UP79 889 aa19.43■□□□□ 0.7
USB1-210ENST00000565151 TRIM35Q9UPQ4 493 aa19.43■□□□□ 0.7
USB1-210ENST00000565151 CLEC4GQ6UXB4 293 aa19.42■□□□□ 0.7
USB1-210ENST00000565151 TTLL7Q6ZT98 887 aa19.42■□□□□ 0.7
USB1-210ENST00000565151 H0YIN7 160 aa19.41■□□□□ 0.7
USB1-210ENST00000565151 LRP10Q7Z4F1 713 aa19.41■□□□□ 0.7
USB1-210ENST00000565151 NGEFQ8N5V2 710 aa19.41■□□□□ 0.7
USB1-210ENST00000565151 TTLL6Q8N841 843 aa19.41■□□□□ 0.7
USB1-210ENST00000565151 SENP3-EIF4A1A0A087X0R7 540 aa19.4■□□□□ 0.7
USB1-210ENST00000565151 NFKBIEO00221 500 aa19.4■□□□□ 0.7
USB1-210ENST00000565151 CNBD1Q8NA66 436 aa19.4■□□□□ 0.7
USB1-210ENST00000565151 NMRK2Q9NPI5 230 aa19.4■□□□□ 0.7
USB1-210ENST00000565151 PDIA6Q15084 440 aa19.39■□□□□ 0.69
USB1-210ENST00000565151 NEUROD2Q15784 382 aa19.39■□□□□ 0.69
USB1-210ENST00000565151 KRT24Q2M2I5 525 aa19.39■□□□□ 0.69
USB1-210ENST00000565151 CCDC184Q52MB2 194 aa19.39■□□□□ 0.69
USB1-210ENST00000565151 RNF181Q9P0P0 153 aa19.39■□□□□ 0.69
USB1-210ENST00000565151 TSPYL4Q9UJ04 414 aa19.39■□□□□ 0.69
USB1-210ENST00000565151 ANKRD36CQ5JPF3 1778 aa19.39■□□□□ 0.69
USB1-210ENST00000565151 SRGNP10124 158 aa19.38■□□□□ 0.69
USB1-210ENST00000565151 PROSER3Q2NL68 480 aa19.38■□□□□ 0.69
USB1-210ENST00000565151 ZNF622Q969S3 477 aaKnown RBP eCLIP19.38■□□□□ 0.69
USB1-210ENST00000565151 NIP7Q9Y221 180 aaKnown RBP eCLIP19.38■□□□□ 0.69
USB1-210ENST00000565151 ANXA1P04083 346 aa19.37■□□□□ 0.69
USB1-210ENST00000565151 MYL6BP14649 208 aa19.37■□□□□ 0.69
USB1-210ENST00000565151 PDE6BP35913 854 aa19.37■□□□□ 0.69
USB1-210ENST00000565151 NPM2Q86SE8 214 aaKnown RBP19.37■□□□□ 0.69
USB1-210ENST00000565151 RUNDC1Q96C34 613 aa19.37■□□□□ 0.69
USB1-210ENST00000565151 ZNF219Q9P2Y4 722 aaPredicted RBP19.37■□□□□ 0.69
USB1-210ENST00000565151 MAP3K15Q6ZN16 1313 aa19.36■□□□□ 0.69
USB1-210ENST00000565151 FAM177BA6PVY3 158 aa19.36■□□□□ 0.69
USB1-210ENST00000565151 RGL2O15211 777 aa19.36■□□□□ 0.69
USB1-210ENST00000565151 C21orf2O43822 256 aa19.36■□□□□ 0.69
USB1-210ENST00000565151 NBPF5PQ86XG9 351 aaPredicted RBP19.36■□□□□ 0.69
USB1-210ENST00000565151 LAMB2P55268 1798 aa19.36■□□□□ 0.69
USB1-210ENST00000565151 ABCC12Q96J65 1359 aa19.35■□□□□ 0.69
USB1-210ENST00000565151 UBN2Q6ZU65 1347 aa19.35■□□□□ 0.69
USB1-210ENST00000565151 KLRG2A4D1S0 409 aaPredicted RBP19.35■□□□□ 0.69
USB1-210ENST00000565151 CHL1O00533 1208 aa19.35■□□□□ 0.69
USB1-210ENST00000565151 ZNF652Q9Y2D9 606 aa19.35■□□□□ 0.69
USB1-210ENST00000565151 ERVV-1B6SEH8 477 aa19.34■□□□□ 0.69
USB1-210ENST00000565151 C7orf43Q8WVR3 580 aa19.34■□□□□ 0.69
USB1-210ENST00000565151 ZBTB3Q9H5J0 574 aa19.34■□□□□ 0.69
USB1-210ENST00000565151 BABAM1Q9NWV8 329 aa19.34■□□□□ 0.69
USB1-210ENST00000565151 ST5P78524 1137 aa19.33■□□□□ 0.68
USB1-210ENST00000565151 WDR43Q15061 677 aaKnown RBP eCLIP19.33■□□□□ 0.68
USB1-210ENST00000565151 STYK1Q6J9G0 422 aa19.33■□□□□ 0.68
USB1-210ENST00000565151 TAF1P21675 1872 aa19.33■□□□□ 0.68
USB1-210ENST00000565151 EIF2S2P20042 333 aaKnown RBP19.32■□□□□ 0.68
USB1-210ENST00000565151 PRPF40BQ6NWY9 871 aaKnown RBP19.32■□□□□ 0.68
USB1-210ENST00000565151 OLFM4Q6UX06 510 aa19.32■□□□□ 0.68
USB1-210ENST00000565151 NUTM1Q86Y26 1132 aa19.32■□□□□ 0.68
USB1-210ENST00000565151 MASTLQ96GX5 879 aa19.32■□□□□ 0.68
USB1-210ENST00000565151 PDZRN3Q9UPQ7 1066 aa19.32■□□□□ 0.68
USB1-210ENST00000565151 ERBB4Q15303 1308 aa19.31■□□□□ 0.68
USB1-210ENST00000565151 LMNB1P20700 586 aa19.31■□□□□ 0.68
USB1-210ENST00000565151 GPTP24298 496 aa19.31■□□□□ 0.68
USB1-210ENST00000565151 LMOD3Q0VAK6 560 aa19.31■□□□□ 0.68
USB1-210ENST00000565151 SUSD4Q5VX71 490 aa19.31■□□□□ 0.68
USB1-210ENST00000565151 TPTE2Q6XPS3 522 aa19.31■□□□□ 0.68
USB1-210ENST00000565151 SLC51AQ86UW1 340 aa19.31■□□□□ 0.68
USB1-210ENST00000565151 ZNF34Q8IZ26 560 aa19.31■□□□□ 0.68
USB1-210ENST00000565151 NECTIN2Q92692 538 aa19.31■□□□□ 0.68
USB1-210ENST00000565151 ERFEQ4G0M1 354 aa19.3■□□□□ 0.68
USB1-210ENST00000565151 SNED1Q8TER0 1413 aa19.29■□□□□ 0.68
USB1-210ENST00000565151 APAF1O14727 1248 aa19.29■□□□□ 0.68
USB1-210ENST00000565151 NPHP1O15259 732 aa19.29■□□□□ 0.68
USB1-210ENST00000565151 C3orf67Q6ZVT6 689 aa19.29■□□□□ 0.68
USB1-210ENST00000565151 CNKSR1Q969H4 720 aa19.29■□□□□ 0.68
USB1-210ENST00000565151 RRAGCQ9HB90 399 aa19.29■□□□□ 0.68
USB1-210ENST00000565151 LAS1LQ9Y4W2 734 aaKnown RBP19.29■□□□□ 0.68
USB1-210ENST00000565151 GIGYF2Q6Y7W6 1299 aaKnown RBP19.28■□□□□ 0.68
USB1-210ENST00000565151 KIF6Q6ZMV9 814 aa19.28■□□□□ 0.68
USB1-210ENST00000565151 WDR90Q96KV7 1748 aa19.28■□□□□ 0.68
USB1-210ENST00000565151 POTECB2RU33 542 aa19.27■□□□□ 0.68
USB1-210ENST00000565151 NTSR2O95665 410 aa19.27■□□□□ 0.68
USB1-210ENST00000565151 ZNF853P0CG23 659 aa19.27■□□□□ 0.68
USB1-210ENST00000565151 NPR1P16066 1061 aa19.27■□□□□ 0.68
USB1-210ENST00000565151 HSPA6P17066 643 aa19.27■□□□□ 0.68
USB1-210ENST00000565151 CRY2Q49AN0 593 aa19.27■□□□□ 0.68
USB1-210ENST00000565151 LTBP3Q9NS15 1303 aa19.26■□□□□ 0.67
USB1-210ENST00000565151 DDX60Q8IY21 1712 aaKnown RBP19.26■□□□□ 0.67
USB1-210ENST00000565151 TOMM70O94826 608 aa19.26■□□□□ 0.67
USB1-210ENST00000565151 COPS6Q7L5N1 327 aa19.26■□□□□ 0.67
USB1-210ENST00000565151 ZC3H4Q9UPT8 1303 aaKnown RBP19.25■□□□□ 0.67
USB1-210ENST00000565151 RIC1Q4ADV7 1423 aa19.25■□□□□ 0.67
USB1-210ENST00000565151 IBTKQ9P2D0 1353 aaPredicted RBP19.25■□□□□ 0.67
USB1-210ENST00000565151 GLTPD2A6NH11 291 aa19.25■□□□□ 0.67
USB1-210ENST00000565151 XAGE3Q8WTP9 111 aa19.25■□□□□ 0.67
USB1-210ENST00000565151 MBIPQ9NS73 344 aa19.25■□□□□ 0.67
USB1-210ENST00000565151 KDM2BQ8NHM5 1336 aa19.25■□□□□ 0.67
USB1-210ENST00000565151 COL4A5P29400 1685 aa19.24■□□□□ 0.67
USB1-210ENST00000565151 SYNE4Q8N205 404 aa19.24■□□□□ 0.67
USB1-210ENST00000565151 CFAP44Q96MT7 982 aa19.24■□□□□ 0.67
USB1-210ENST00000565151 DDX21Q9NR30 783 aaKnown RBP eCLIP19.24■□□□□ 0.67
USB1-210ENST00000565151 CHPF2Q9P2E5 772 aa19.24■□□□□ 0.67
USB1-210ENST00000565151 NYXQ9GZU5 481 aa19.23■□□□□ 0.67
USB1-210ENST00000565151 TAOK3Q9H2K8 898 aa19.23■□□□□ 0.67
USB1-210ENST00000565151 AIMP1Q12904 312 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms