RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 SERPINB2P05120 415 aa12.91□□□□□ -0.34
CDH1-206ENST00000564676 ZNF853P0CG23 659 aa12.91□□□□□ -0.34
CDH1-206ENST00000564676 WWC1Q8IX03 1113 aa12.91□□□□□ -0.34
CDH1-206ENST00000564676 SETDB2Q96T68 719 aa12.91□□□□□ -0.34
CDH1-206ENST00000564676 ZNF652Q9Y2D9 606 aa12.91□□□□□ -0.34
CDH1-206ENST00000564676 TGFB2P61812 414 aa12.9□□□□□ -0.34
CDH1-206ENST00000564676 DUSP27Q5VZP5 1158 aa12.9□□□□□ -0.34
CDH1-206ENST00000564676 CLEC4GQ6UXB4 293 aa12.9□□□□□ -0.34
CDH1-206ENST00000564676 KIF6Q6ZMV9 814 aa12.9□□□□□ -0.34
CDH1-206ENST00000564676 WWC3Q9ULE0 1092 aa12.9□□□□□ -0.34
CDH1-206ENST00000564676 CCER2I3L3R5 266 aa12.89□□□□□ -0.35
CDH1-206ENST00000564676 NPHP1O15259 732 aa12.89□□□□□ -0.35
CDH1-206ENST00000564676 ANXA1P04083 346 aa12.89□□□□□ -0.35
CDH1-206ENST00000564676 HOXB7P09629 217 aa12.89□□□□□ -0.35
CDH1-206ENST00000564676 HDGFL1Q5TGJ6 251 aa12.89□□□□□ -0.35
CDH1-206ENST00000564676 DIEXFQ68CQ4 756 aaKnown RBP12.89□□□□□ -0.35
CDH1-206ENST00000564676 C10orf71Q711Q0 1435 aa12.88□□□□□ -0.35
CDH1-206ENST00000564676 A0A0G2JLW4 131 aa12.88□□□□□ -0.35
CDH1-206ENST00000564676 ELL2O00472 640 aaPredicted RBP12.88□□□□□ -0.35
CDH1-206ENST00000564676 DPEP1P16444 411 aa12.88□□□□□ -0.35
CDH1-206ENST00000564676 HLFQ16534 295 aa12.88□□□□□ -0.35
CDH1-206ENST00000564676 PROSER3Q2NL68 480 aa12.88□□□□□ -0.35
CDH1-206ENST00000564676 TTLL7Q6ZT98 887 aa12.88□□□□□ -0.35
CDH1-206ENST00000564676 MAP3K15Q6ZN16 1313 aa12.88□□□□□ -0.35
CDH1-206ENST00000564676 SCN7AQ01118 1682 aa12.87□□□□□ -0.35
CDH1-206ENST00000564676 CARMIL3Q8ND23 1372 aa12.87□□□□□ -0.35
CDH1-206ENST00000564676 ERVV-1B6SEH8 477 aa12.87□□□□□ -0.35
CDH1-206ENST00000564676 RGL2O15211 777 aa12.87□□□□□ -0.35
CDH1-206ENST00000564676 GRIN3BO60391 1043 aa12.87□□□□□ -0.35
CDH1-206ENST00000564676 YBX3P16989 372 aaKnown RBP eCLIP12.87□□□□□ -0.35
CDH1-206ENST00000564676 PDIA6Q15084 440 aa12.87□□□□□ -0.35
CDH1-206ENST00000564676 TSR2Q969E8 191 aaKnown RBP12.87□□□□□ -0.35
CDH1-206ENST00000564676 ZBTB3Q9H5J0 574 aa12.87□□□□□ -0.35
CDH1-206ENST00000564676 DDX21Q9NR30 783 aaKnown RBP eCLIP12.87□□□□□ -0.35
CDH1-206ENST00000564676 NIP7Q9Y221 180 aaKnown RBP eCLIP12.87□□□□□ -0.35
CDH1-206ENST00000564676 AFDNP55196 1824 aaKnown RBP12.86□□□□□ -0.35
CDH1-206ENST00000564676 AIMP1Q12904 312 aaKnown RBP12.86□□□□□ -0.35
CDH1-206ENST00000564676 COPS6Q7L5N1 327 aa12.86□□□□□ -0.35
CDH1-206ENST00000564676 WDR63Q8IWG1 891 aa12.86□□□□□ -0.35
CDH1-206ENST00000564676 CHPF2Q9P2E5 772 aa12.86□□□□□ -0.35
CDH1-206ENST00000564676 IL16Q14005 1332 aa12.86□□□□□ -0.35
CDH1-206ENST00000564676 KIF13BQ9NQT8 1826 aa12.85□□□□□ -0.35
CDH1-206ENST00000564676 PXDNLA1KZ92 1463 aa12.85□□□□□ -0.35
CDH1-206ENST00000564676 BCORQ6W2J9 1755 aa12.85□□□□□ -0.35
CDH1-206ENST00000564676 FAM177BA6PVY3 158 aa12.85□□□□□ -0.35
CDH1-206ENST00000564676 CHRNA5P30532 468 aa12.85□□□□□ -0.35
CDH1-206ENST00000564676 ST5P78524 1137 aa12.85□□□□□ -0.35
CDH1-206ENST00000564676 PRR5LQ6MZQ0 368 aa12.85□□□□□ -0.35
CDH1-206ENST00000564676 NBPF5PQ86XG9 351 aaPredicted RBP12.85□□□□□ -0.35
CDH1-206ENST00000564676 CCDC24Q8N4L8 307 aa12.85□□□□□ -0.35
CDH1-206ENST00000564676 CNBD1Q8NA66 436 aa12.85□□□□□ -0.35
CDH1-206ENST00000564676 C8orf58Q8NAV2 365 aa12.85□□□□□ -0.35
CDH1-206ENST00000564676 XAGE3Q8WTP9 111 aa12.85□□□□□ -0.35
CDH1-206ENST00000564676 DBF4Q9UBU7 674 aaPredicted RBP12.85□□□□□ -0.35
CDH1-206ENST00000564676 BCS1LQ9Y276 419 aa12.85□□□□□ -0.35
CDH1-206ENST00000564676 N4BP2Q86UW6 1770 aaPredicted RBP12.84□□□□□ -0.35
CDH1-206ENST00000564676 YY1P25490 414 aa12.84□□□□□ -0.35
CDH1-206ENST00000564676 TPTE2Q6XPS3 522 aa12.84□□□□□ -0.35
CDH1-206ENST00000564676 LRP10Q7Z4F1 713 aa12.84□□□□□ -0.35
CDH1-206ENST00000564676 C2CD5Q86YS7 1000 aa12.84□□□□□ -0.35
CDH1-206ENST00000564676 CHMP4AQ9BY43 222 aa12.84□□□□□ -0.35
CDH1-206ENST00000564676 PIM2Q9P1W9 311 aa12.84□□□□□ -0.35
CDH1-206ENST00000564676 ZBTB12Q9Y330 459 aaPredicted RBP12.84□□□□□ -0.35
CDH1-206ENST00000564676 GPTP24298 496 aa12.83□□□□□ -0.36
CDH1-206ENST00000564676 GTF2E1P29083 439 aaPredicted RBP12.83□□□□□ -0.36
CDH1-206ENST00000564676 PDE6BP35913 854 aa12.83□□□□□ -0.36
CDH1-206ENST00000564676 GIGYF2Q6Y7W6 1299 aaKnown RBP12.83□□□□□ -0.36
CDH1-206ENST00000564676 MIER1Q8N108 512 aa12.83□□□□□ -0.36
CDH1-206ENST00000564676 TSPYL6Q8N831 410 aa12.83□□□□□ -0.36
CDH1-206ENST00000564676 BRIP1Q9BX63 1249 aa12.83□□□□□ -0.36
CDH1-206ENST00000564676 HYPKQ9NX55 129 aa12.83□□□□□ -0.36
CDH1-206ENST00000564676 NRXN2Q9P2S2 1712 aa12.82□□□□□ -0.36
CDH1-206ENST00000564676 H0YIN7 160 aa12.82□□□□□ -0.36
CDH1-206ENST00000564676 KCNA3P22001 575 aa12.82□□□□□ -0.36
CDH1-206ENST00000564676 GOLGA2Q08379 1002 aa12.82□□□□□ -0.36
CDH1-206ENST00000564676 DALRD3Q5D0E6 543 aaKnown RBP12.82□□□□□ -0.36
CDH1-206ENST00000564676 CCDC30Q5VVM6 783 aa12.82□□□□□ -0.36
CDH1-206ENST00000564676 PDZRN3Q9UPQ7 1066 aa12.82□□□□□ -0.36
CDH1-206ENST00000564676 NUP98P52948 1817 aa12.82□□□□□ -0.36
CDH1-206ENST00000564676 TWISTNBQ3B726 338 aaPredicted RBP12.81□□□□□ -0.36
CDH1-206ENST00000564676 HSP90AB3PQ58FF7 597 aa12.81□□□□□ -0.36
CDH1-206ENST00000564676 ZNF622Q969S3 477 aaKnown RBP eCLIP12.81□□□□□ -0.36
CDH1-206ENST00000564676 NYXQ9GZU5 481 aa12.81□□□□□ -0.36
CDH1-206ENST00000564676 MYH16Q9H6N6 1097 aa12.81□□□□□ -0.36
CDH1-206ENST00000564676 FANCIQ9NVI1 1328 aa12.81□□□□□ -0.36
CDH1-206ENST00000564676 CHD4Q14839 1912 aa12.8□□□□□ -0.36
CDH1-206ENST00000564676 KIAA1551Q9HCM1 1747 aa12.8□□□□□ -0.36
CDH1-206ENST00000564676 SUSD4Q5VX71 490 aa12.8□□□□□ -0.36
CDH1-206ENST00000564676 ANKRD13DQ6ZTN6 518 aa12.8□□□□□ -0.36
CDH1-206ENST00000564676 PPP1R42Q7Z4L9 355 aa12.8□□□□□ -0.36
CDH1-206ENST00000564676 ZNF34Q8IZ26 560 aa12.8□□□□□ -0.36
CDH1-206ENST00000564676 PLBD2Q8NHP8 589 aa12.8□□□□□ -0.36
CDH1-206ENST00000564676 STK31Q9BXU1 1019 aa12.8□□□□□ -0.36
CDH1-206ENST00000564676 ATP10DQ9P241 1426 aa12.79□□□□□ -0.36
CDH1-206ENST00000564676 TCERG1O14776 1098 aaKnown RBP12.79□□□□□ -0.36
CDH1-206ENST00000564676 EXOSC9Q06265 439 aaKnown RBP12.79□□□□□ -0.36
CDH1-206ENST00000564676 TCIRG1Q13488 830 aa12.79□□□□□ -0.36
CDH1-206ENST00000564676 PARP10Q53GL7 1025 aa12.79□□□□□ -0.36
CDH1-206ENST00000564676 ARHGAP27Q6ZUM4 889 aa12.79□□□□□ -0.36
CDH1-206ENST00000564676 RIC3Q7Z5B4 369 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms