RNA–Protein interactions for RNA: ENST00000564313.1

PKD1-227, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-227ENST00000564313 CLEC4GQ6UXB4 293 aa23.64■■□□□ 1.37
PKD1-227ENST00000564313 MYH16Q9H6N6 1097 aa23.64■■□□□ 1.37
PKD1-227ENST00000564313 BCL2L12Q9HB09 334 aa23.64■■□□□ 1.37
PKD1-227ENST00000564313 ZNF521Q96K83 1311 aa23.63■■□□□ 1.37
PKD1-227ENST00000564313 TSR2Q969E8 191 aaKnown RBP23.63■■□□□ 1.37
PKD1-227ENST00000564313 TOMM70O94826 608 aa23.62■■□□□ 1.37
PKD1-227ENST00000564313 MYL6BP14649 208 aa23.62■■□□□ 1.37
PKD1-227ENST00000564313 TM4SF1P30408 202 aa23.62■■□□□ 1.37
PKD1-227ENST00000564313 KIF6Q6ZMV9 814 aa23.62■■□□□ 1.37
PKD1-227ENST00000564313 DDX21Q9NR30 783 aaKnown RBP eCLIP23.62■■□□□ 1.37
PKD1-227ENST00000564313 DBF4Q9UBU7 674 aaPredicted RBP23.62■■□□□ 1.37
PKD1-227ENST00000564313 FANCIQ9NVI1 1328 aa23.61■■□□□ 1.37
PKD1-227ENST00000564313 GOLGA2Q08379 1002 aa23.61■■□□□ 1.37
PKD1-227ENST00000564313 PDIA6Q15084 440 aa23.61■■□□□ 1.37
PKD1-227ENST00000564313 ERVV-1B6SEH8 477 aa23.6■■□□□ 1.37
PKD1-227ENST00000564313 DDR1Q08345 913 aa23.6■■□□□ 1.37
PKD1-227ENST00000564313 NFIXQ14938 502 aa23.6■■□□□ 1.37
PKD1-227ENST00000564313 COL13A1Q5TAT6 717 aaPredicted RBP23.6■■□□□ 1.37
PKD1-227ENST00000564313 POLRMTO00411 1230 aaKnown RBP23.59■■□□□ 1.37
PKD1-227ENST00000564313 C8orf58Q8NAV2 365 aa23.59■■□□□ 1.37
PKD1-227ENST00000564313 NECTIN2Q92692 538 aa23.59■■□□□ 1.37
PKD1-227ENST00000564313 MAP3K15Q6ZN16 1313 aa23.59■■□□□ 1.37
PKD1-227ENST00000564313 CARMIL3Q8ND23 1372 aa23.58■■□□□ 1.37
PKD1-227ENST00000564313 CCDC30Q5VVM6 783 aa23.58■■□□□ 1.37
PKD1-227ENST00000564313 LRP10Q7Z4F1 713 aa23.58■■□□□ 1.37
PKD1-227ENST00000564313 HYPKQ9NX55 129 aa23.58■■□□□ 1.37
PKD1-227ENST00000564313 CHPF2Q9P2E5 772 aa23.58■■□□□ 1.37
PKD1-227ENST00000564313 KIF13BQ9NQT8 1826 aa23.58■■□□□ 1.37
PKD1-227ENST00000564313 C10orf71Q711Q0 1435 aa23.58■■□□□ 1.36
PKD1-227ENST00000564313 NRXN2Q9P2S2 1712 aa23.57■■□□□ 1.36
PKD1-227ENST00000564313 ELL2O00472 640 aaPredicted RBP23.57■■□□□ 1.36
PKD1-227ENST00000564313 CAPN15O75808 1086 aa23.57■■□□□ 1.36
PKD1-227ENST00000564313 TWISTNBQ3B726 338 aaPredicted RBP23.57■■□□□ 1.36
PKD1-227ENST00000564313 TBC1D9BQ66K14 1250 aa23.57■■□□□ 1.36
PKD1-227ENST00000564313 SETDB2Q96T68 719 aa23.57■■□□□ 1.36
PKD1-227ENST00000564313 PROSER3Q2NL68 480 aa23.56■■□□□ 1.36
PKD1-227ENST00000564313 E9PSI1 815 aa23.55■■□□□ 1.36
PKD1-227ENST00000564313 TSPYL6Q8N831 410 aa23.55■■□□□ 1.36
PKD1-227ENST00000564313 WDR90Q96KV7 1748 aa23.55■■□□□ 1.36
PKD1-227ENST00000564313 SERPINB2P05120 415 aa23.54■■□□□ 1.36
PKD1-227ENST00000564313 BICDL1Q6ZP65 573 aa23.54■■□□□ 1.36
PKD1-227ENST00000564313 TTLL7Q6ZT98 887 aa23.54■■□□□ 1.36
PKD1-227ENST00000564313 NMRK2Q9NPI5 230 aa23.54■■□□□ 1.36
PKD1-227ENST00000564313 SPINK5Q9NQ38 1064 aaPredicted RBP23.54■■□□□ 1.36
PKD1-227ENST00000564313 NUP98P52948 1817 aa23.54■■□□□ 1.36
PKD1-227ENST00000564313 AFDNP55196 1824 aaKnown RBP23.54■■□□□ 1.36
PKD1-227ENST00000564313 ANXA1P04083 346 aa23.53■■□□□ 1.36
PKD1-227ENST00000564313 TGFB2P61812 414 aa23.53■■□□□ 1.36
PKD1-227ENST00000564313 HTRA3P83110 453 aa23.53■■□□□ 1.36
PKD1-227ENST00000564313 COPS6Q7L5N1 327 aa23.53■■□□□ 1.36
PKD1-227ENST00000564313 XAGE3Q8WTP9 111 aa23.53■■□□□ 1.36
PKD1-227ENST00000564313 STK31Q9BXU1 1019 aa23.53■■□□□ 1.36
PKD1-227ENST00000564313 GIGYF2Q6Y7W6 1299 aaKnown RBP23.52■■□□□ 1.36
PKD1-227ENST00000564313 KLRG1Q96E93 195 aa23.52■■□□□ 1.36
PKD1-227ENST00000564313 ZBTB3Q9H5J0 574 aa23.52■■□□□ 1.36
PKD1-227ENST00000564313 EXOSC9Q06265 439 aaKnown RBP23.51■■□□□ 1.35
PKD1-227ENST00000564313 HLFQ16534 295 aa23.51■■□□□ 1.35
PKD1-227ENST00000564313 HSP90AB3PQ58FF7 597 aa23.51■■□□□ 1.35
PKD1-227ENST00000564313 NIP7Q9Y221 180 aaKnown RBP eCLIP23.51■■□□□ 1.35
PKD1-227ENST00000564313 AIMP1Q12904 312 aaKnown RBP23.5■■□□□ 1.35
PKD1-227ENST00000564313 JMYQ8N9B5 988 aa23.5■■□□□ 1.35
PKD1-227ENST00000564313 PXDNLA1KZ92 1463 aa23.49■■□□□ 1.35
PKD1-227ENST00000564313 CACNA1FO60840 1977 aa23.49■■□□□ 1.35
PKD1-227ENST00000564313 SLFN5Q08AF3 891 aa23.49■■□□□ 1.35
PKD1-227ENST00000564313 PCNTO95613 3336 aa23.48■■□□□ 1.35
PKD1-227ENST00000564313 A0A0G2JLW4 131 aa23.48■■□□□ 1.35
PKD1-227ENST00000564313 NPHP1O15259 732 aa23.48■■□□□ 1.35
PKD1-227ENST00000564313 VAMP4O75379 141 aa23.48■■□□□ 1.35
PKD1-227ENST00000564313 CNBD1Q8NA66 436 aa23.48■■□□□ 1.35
PKD1-227ENST00000564313 PLBD2Q8NHP8 589 aa23.48■■□□□ 1.35
PKD1-227ENST00000564313 IBTKQ9P2D0 1353 aaPredicted RBP23.48■■□□□ 1.35
PKD1-227ENST00000564313 KIAA1551Q9HCM1 1747 aa23.47■■□□□ 1.35
PKD1-227ENST00000564313 ST5P78524 1137 aa23.47■■□□□ 1.35
PKD1-227ENST00000564313 ANKRD13DQ6ZTN6 518 aa23.47■■□□□ 1.35
PKD1-227ENST00000564313 NBPF5PQ86XG9 351 aaPredicted RBP23.47■■□□□ 1.35
PKD1-227ENST00000564313 TNS4Q8IZW8 715 aa23.47■■□□□ 1.35
PKD1-227ENST00000564313 RBM46Q8TBY0 533 aaKnown RBP23.47■■□□□ 1.35
PKD1-227ENST00000564313 NYXQ9GZU5 481 aa23.47■■□□□ 1.35
PKD1-227ENST00000564313 ANKRD36CQ5JPF3 1778 aa23.47■■□□□ 1.35
PKD1-227ENST00000564313 N4BP2Q86UW6 1770 aaPredicted RBP23.47■■□□□ 1.35
PKD1-227ENST00000564313 DDX58O95786 925 aaKnown RBP23.46■■□□□ 1.35
PKD1-227ENST00000564313 PARP10Q53GL7 1025 aa23.46■■□□□ 1.35
PKD1-227ENST00000564313 PRR5LQ6MZQ0 368 aa23.46■■□□□ 1.35
PKD1-227ENST00000564313 TPTE2Q6XPS3 522 aa23.46■■□□□ 1.35
PKD1-227ENST00000564313 ZNF34Q8IZ26 560 aa23.46■■□□□ 1.35
PKD1-227ENST00000564313 PDZRN3Q9UPQ7 1066 aa23.46■■□□□ 1.35
PKD1-227ENST00000564313 BCS1LQ9Y276 419 aa23.46■■□□□ 1.35
PKD1-227ENST00000564313 DPEP1P16444 411 aa23.45■■□□□ 1.34
PKD1-227ENST00000564313 PRELPP51888 382 aa23.45■■□□□ 1.34
PKD1-227ENST00000564313 HNRNPUQ00839 825 aaKnown RBP eCLIP23.45■■□□□ 1.34
PKD1-227ENST00000564313 ARHGAP27Q6ZUM4 889 aa23.44■■□□□ 1.34
PKD1-227ENST00000564313 BRIP1Q9BX63 1249 aa23.44■■□□□ 1.34
PKD1-227ENST00000564313 KCNA3P22001 575 aa23.43■■□□□ 1.34
PKD1-227ENST00000564313 PDE6BP35913 854 aa23.43■■□□□ 1.34
PKD1-227ENST00000564313 TCIRG1Q13488 830 aa23.43■■□□□ 1.34
PKD1-227ENST00000564313 PPP1R42Q7Z4L9 355 aa23.43■■□□□ 1.34
PKD1-227ENST00000564313 TRMT2AQ8IZ69 625 aaKnown RBP23.43■■□□□ 1.34
PKD1-227ENST00000564313 PHAXQ9H814 394 aaKnown RBP23.43■■□□□ 1.34
PKD1-227ENST00000564313 ARFGEF2Q9Y6D5 1785 aa23.42■■□□□ 1.34
PKD1-227ENST00000564313 RNF123Q5XPI4 1314 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms