RNA–Protein interactions for RNA: ENST00000563995.1

SLX1A-204, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

TSL 3

Gene SLX1A, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-204ENST00000563995 SOS1Q07889 1333 aaPredicted RBP25.37■■□□□ 1.65
SLX1A-204ENST00000563995 KDM2BQ8NHM5 1336 aa25.37■■□□□ 1.65
SLX1A-204ENST00000563995 SNRPA1P09661 255 aaKnown RBP25.37■■□□□ 1.65
SLX1A-204ENST00000563995 CYP19A1P11511 503 aaPredicted RBP25.37■■□□□ 1.65
SLX1A-204ENST00000563995 GNAI1P63096 354 aa25.37■■□□□ 1.65
SLX1A-204ENST00000563995 DALRD3Q5D0E6 543 aaKnown RBP25.37■■□□□ 1.65
SLX1A-204ENST00000563995 CHRNA5P30532 468 aa25.36■■□□□ 1.65
SLX1A-204ENST00000563995 SMC1BQ8NDV3 1235 aa25.36■■□□□ 1.65
SLX1A-204ENST00000563995 PCDH10Q9P2E7 1040 aa25.36■■□□□ 1.65
SLX1A-204ENST00000563995 STARD3NLO95772 234 aa25.35■■□□□ 1.65
SLX1A-204ENST00000563995 USPL1Q5W0Q7 1092 aa25.35■■□□□ 1.65
SLX1A-204ENST00000563995 WDR63Q8IWG1 891 aa25.35■■□□□ 1.65
SLX1A-204ENST00000563995 MBIPQ9NS73 344 aa25.35■■□□□ 1.65
SLX1A-204ENST00000563995 IL16Q14005 1332 aa25.35■■□□□ 1.65
SLX1A-204ENST00000563995 PRAMEF22A3QJZ6 481 aa25.34■■□□□ 1.65
SLX1A-204ENST00000563995 RRAGCQ9HB90 399 aa25.34■■□□□ 1.65
SLX1A-204ENST00000563995 TIAM2Q8IVF5 1701 aa25.34■■□□□ 1.65
SLX1A-204ENST00000563995 RNF181Q9P0P0 153 aa25.33■■□□□ 1.65
SLX1A-204ENST00000563995 USP16Q9Y5T5 823 aa25.33■■□□□ 1.65
SLX1A-204ENST00000563995 LAMB4A4D0S4 1761 aa25.33■■□□□ 1.65
SLX1A-204ENST00000563995 COL15A1P39059 1388 aa25.32■■□□□ 1.64
SLX1A-204ENST00000563995 ZPR1O75312 459 aa25.32■■□□□ 1.64
SLX1A-204ENST00000563995 ZNF521Q96K83 1311 aa25.32■■□□□ 1.64
SLX1A-204ENST00000563995 ANKRD31Q8N7Z5 1873 aa25.32■■□□□ 1.64
SLX1A-204ENST00000563995 NARFQ9UHQ1 456 aa25.3■■□□□ 1.64
SLX1A-204ENST00000563995 ZBTB1Q9Y2K1 713 aa25.3■■□□□ 1.64
SLX1A-204ENST00000563995 SCN7AQ01118 1682 aa25.29■■□□□ 1.64
SLX1A-204ENST00000563995 NFIXQ14938 502 aa25.29■■□□□ 1.64
SLX1A-204ENST00000563995 BCL2L12Q9HB09 334 aa25.28■■□□□ 1.64
SLX1A-204ENST00000563995 DICER1Q9UPY3 1922 aaKnown RBP25.27■■□□□ 1.64
SLX1A-204ENST00000563995 A1BGP04217 495 aa25.27■■□□□ 1.64
SLX1A-204ENST00000563995 KRT24Q2M2I5 525 aa25.27■■□□□ 1.64
SLX1A-204ENST00000563995 COL11A2P13942 1736 aaPredicted RBP25.26■■□□□ 1.63
SLX1A-204ENST00000563995 TSR2Q969E8 191 aaKnown RBP25.26■■□□□ 1.63
SLX1A-204ENST00000563995 ZC3H4Q9UPT8 1303 aaKnown RBP25.26■■□□□ 1.63
SLX1A-204ENST00000563995 CANXP27824 592 aaKnown RBP25.25■■□□□ 1.63
SLX1A-204ENST00000563995 RASSF7Q02833 373 aa25.25■■□□□ 1.63
SLX1A-204ENST00000563995 CARMIL3Q8ND23 1372 aa25.25■■□□□ 1.63
SLX1A-204ENST00000563995 FER1L6Q2WGJ9 1857 aa25.24■■□□□ 1.63
SLX1A-204ENST00000563995 HOXB7P09629 217 aa25.24■■□□□ 1.63
SLX1A-204ENST00000563995 SPINK5Q9NQ38 1064 aaPredicted RBP25.24■■□□□ 1.63
SLX1A-204ENST00000563995 FANCIQ9NVI1 1328 aa25.23■■□□□ 1.63
SLX1A-204ENST00000563995 CACNA1SQ13698 1873 aa25.22■■□□□ 1.63
SLX1A-204ENST00000563995 SERPINB2P05120 415 aa25.22■■□□□ 1.63
SLX1A-204ENST00000563995 IL6STP40189 918 aaPredicted RBP25.22■■□□□ 1.63
SLX1A-204ENST00000563995 EIF5P55010 431 aaKnown RBP25.22■■□□□ 1.63
SLX1A-204ENST00000563995 DUSP27Q5VZP5 1158 aa25.22■■□□□ 1.63
SLX1A-204ENST00000563995 GOLGA2Q08379 1002 aa25.21■■□□□ 1.63
SLX1A-204ENST00000563995 BCORQ6W2J9 1755 aa25.21■■□□□ 1.63
SLX1A-204ENST00000563995 ERBB4Q15303 1308 aa25.2■■□□□ 1.62
SLX1A-204ENST00000563995 NBPF26B4DH59 902 aa25.2■■□□□ 1.62
SLX1A-204ENST00000563995 EIF2S2P20042 333 aaKnown RBP25.2■■□□□ 1.62
SLX1A-204ENST00000563995 PIP4K2AP48426 406 aaPredicted RBP25.2■■□□□ 1.62
SLX1A-204ENST00000563995 NBPF10Q6P3W6 841 aaKnown RBP25.2■■□□□ 1.62
SLX1A-204ENST00000563995 NBPF15Q8N660 670 aa25.2■■□□□ 1.62
SLX1A-204ENST00000563995 C8orf58Q8NAV2 365 aa25.2■■□□□ 1.62
SLX1A-204ENST00000563995 MYH16Q9H6N6 1097 aa25.2■■□□□ 1.62
SLX1A-204ENST00000563995 ARFGEF2Q9Y6D5 1785 aa25.19■■□□□ 1.62
SLX1A-204ENST00000563995 LMNB1P20700 586 aa25.19■■□□□ 1.62
SLX1A-204ENST00000563995 HNRNPUQ00839 825 aaKnown RBP eCLIP25.19■■□□□ 1.62
SLX1A-204ENST00000563995 A0A087WZG4 1122 aa25.18■■□□□ 1.62
SLX1A-204ENST00000563995 TTLL6Q8N841 843 aa25.18■■□□□ 1.62
SLX1A-204ENST00000563995 E9PSI1 815 aa25.17■■□□□ 1.62
SLX1A-204ENST00000563995 HDGFL1Q5TGJ6 251 aa25.17■■□□□ 1.62
SLX1A-204ENST00000563995 ZNF330Q9Y3S2 320 aaPredicted RBP25.17■■□□□ 1.62
SLX1A-204ENST00000563995 GLTPD2A6NH11 291 aa25.16■■□□□ 1.62
SLX1A-204ENST00000563995 ELL2O00472 640 aaPredicted RBP25.16■■□□□ 1.62
SLX1A-204ENST00000563995 FAM161AQ3B820 660 aa25.16■■□□□ 1.62
SLX1A-204ENST00000563995 NPM2Q86SE8 214 aaKnown RBP25.16■■□□□ 1.62
SLX1A-204ENST00000563995 C2CD5Q86YS7 1000 aa25.16■■□□□ 1.62
SLX1A-204ENST00000563995 TSPYL6Q8N831 410 aa25.16■■□□□ 1.62
SLX1A-204ENST00000563995 NECTIN2Q92692 538 aa25.16■■□□□ 1.62
SLX1A-204ENST00000563995 NFKBIEO00221 500 aa25.15■■□□□ 1.62
SLX1A-204ENST00000563995 SLFN5Q08AF3 891 aa25.14■■□□□ 1.62
SLX1A-204ENST00000563995 PDIA6Q15084 440 aa25.14■■□□□ 1.62
SLX1A-204ENST00000563995 PRDM10Q9NQV6 1147 aa25.14■■□□□ 1.62
SLX1A-204ENST00000563995 H0YIN7 160 aa25.13■■□□□ 1.61
SLX1A-204ENST00000563995 MYL6BP14649 208 aa25.13■■□□□ 1.61
SLX1A-204ENST00000563995 VEGFAP15692 232 aaPredicted RBP25.13■■□□□ 1.61
SLX1A-204ENST00000563995 EXOSC9Q06265 439 aaKnown RBP25.13■■□□□ 1.61
SLX1A-204ENST00000563995 TWISTNBQ3B726 338 aaPredicted RBP25.13■■□□□ 1.61
SLX1A-204ENST00000563995 TBC1D9BQ66K14 1250 aa25.13■■□□□ 1.61
SLX1A-204ENST00000563995 BICDL1Q6ZP65 573 aa25.13■■□□□ 1.61
SLX1A-204ENST00000563995 SLX4Q8IY92 1834 aa25.13■■□□□ 1.61
SLX1A-204ENST00000563995 FOXN1O15353 648 aa25.12■■□□□ 1.61
SLX1A-204ENST00000563995 LRP10Q7Z4F1 713 aa25.12■■□□□ 1.61
SLX1A-204ENST00000563995 CDCA7LQ96GN5 454 aa25.12■■□□□ 1.61
SLX1A-204ENST00000563995 PROSER3Q2NL68 480 aa25.11■■□□□ 1.61
SLX1A-204ENST00000563995 DZIP3Q86Y13 1208 aaKnown RBP25.11■■□□□ 1.61
SLX1A-204ENST00000563995 CHMP4AQ9BY43 222 aa25.11■■□□□ 1.61
SLX1A-204ENST00000563995 DDX21Q9NR30 783 aaKnown RBP eCLIP25.11■■□□□ 1.61
SLX1A-204ENST00000563995 CHPF2Q9P2E5 772 aa25.11■■□□□ 1.61
SLX1A-204ENST00000563995 TBC1D2BQ9UPU7 963 aa25.11■■□□□ 1.61
SLX1A-204ENST00000563995 ANXA1P04083 346 aa25.1■■□□□ 1.61
SLX1A-204ENST00000563995 DBF4Q9UBU7 674 aaPredicted RBP25.1■■□□□ 1.61
SLX1A-204ENST00000563995 CAMTA2O94983 1202 aa25.09■■□□□ 1.61
SLX1A-204ENST00000563995 PRR5LQ6MZQ0 368 aa25.09■■□□□ 1.61
SLX1A-204ENST00000563995 TRMT2AQ8IZ69 625 aaKnown RBP25.09■■□□□ 1.61
SLX1A-204ENST00000563995 MKRN1Q9UHC7 482 aaKnown RBP25.09■■□□□ 1.61
SLX1A-204ENST00000563995 ZBED9Q6R2W3 1325 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms