RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 NECTIN2Q92692 538 aa36.87■■■■□ 3.49
NME3-203ENST00000563367 CHRNA5P30532 468 aa36.86■■■■□ 3.49
NME3-203ENST00000563367 PROSER3Q2NL68 480 aa36.86■■■■□ 3.49
NME3-203ENST00000563367 LRP10Q7Z4F1 713 aa36.86■■■■□ 3.49
NME3-203ENST00000563367 ZNF652Q9Y2D9 606 aa36.86■■■■□ 3.49
NME3-203ENST00000563367 GNAI1P63096 354 aa36.85■■■■□ 3.49
NME3-203ENST00000563367 RGL2O15211 777 aa36.84■■■■□ 3.49
NME3-203ENST00000563367 ANXA1P04083 346 aa36.84■■■■□ 3.49
NME3-203ENST00000563367 CCDC27Q2M243 656 aa36.84■■■■□ 3.49
NME3-203ENST00000563367 FAM9BQ8IZU0 186 aa36.84■■■■□ 3.49
NME3-203ENST00000563367 PRR5LQ6MZQ0 368 aa36.83■■■■□ 3.49
NME3-203ENST00000563367 CCDC24Q8N4L8 307 aa36.83■■■■□ 3.49
NME3-203ENST00000563367 DLEC1Q9Y238 1755 aa36.83■■■■□ 3.49
NME3-203ENST00000563367 MAP3K15Q6ZN16 1313 aa36.83■■■■□ 3.49
NME3-203ENST00000563367 WWC1Q8IX03 1113 aa36.82■■■■□ 3.48
NME3-203ENST00000563367 BCS1LQ9Y276 419 aa36.82■■■■□ 3.48
NME3-203ENST00000563367 ARFGEF1Q9Y6D6 1849 aa36.82■■■■□ 3.48
NME3-203ENST00000563367 ERVV-1B6SEH8 477 aa36.81■■■■□ 3.48
NME3-203ENST00000563367 KIF6Q6ZMV9 814 aa36.8■■■■□ 3.48
NME3-203ENST00000563367 PIM2Q9P1W9 311 aa36.8■■■■□ 3.48
NME3-203ENST00000563367 NIP7Q9Y221 180 aaKnown RBP eCLIP36.8■■■■□ 3.48
NME3-203ENST00000563367 DUSP27Q5VZP5 1158 aa36.79■■■■□ 3.48
NME3-203ENST00000563367 ZBTB3Q9H5J0 574 aa36.79■■■■□ 3.48
NME3-203ENST00000563367 HOXB7P09629 217 aa36.78■■■■□ 3.48
NME3-203ENST00000563367 NCBP3Q53F19 620 aaKnown RBP36.77■■■■□ 3.48
NME3-203ENST00000563367 CNBD1Q8NA66 436 aa36.77■■■■□ 3.48
NME3-203ENST00000563367 HDGFL1Q5TGJ6 251 aa36.76■■■■□ 3.48
NME3-203ENST00000563367 DDX21Q9NR30 783 aaKnown RBP eCLIP36.76■■■■□ 3.48
NME3-203ENST00000563367 NBPF5PQ86XG9 351 aaPredicted RBP36.75■■■■□ 3.47
NME3-203ENST00000563367 C2CD5Q86YS7 1000 aa36.75■■■■□ 3.47
NME3-203ENST00000563367 BRIP1Q9BX63 1249 aa36.75■■■■□ 3.47
NME3-203ENST00000563367 CHPF2Q9P2E5 772 aa36.75■■■■□ 3.47
NME3-203ENST00000563367 SALL2Q9Y467 1007 aaPredicted RBP36.75■■■■□ 3.47
NME3-203ENST00000563367 COL11A2P13942 1736 aaPredicted RBP36.75■■■■□ 3.47
NME3-203ENST00000563367 DALRD3Q5D0E6 543 aaKnown RBP36.73■■■■□ 3.47
NME3-203ENST00000563367 ELL2O00472 640 aaPredicted RBP36.72■■■■□ 3.47
NME3-203ENST00000563367 NPHP1O15259 732 aa36.72■■■■□ 3.47
NME3-203ENST00000563367 COPS6Q7L5N1 327 aa36.72■■■■□ 3.47
NME3-203ENST00000563367 C8orf58Q8NAV2 365 aa36.72■■■■□ 3.47
NME3-203ENST00000563367 ATP10DQ9P241 1426 aa36.72■■■■□ 3.47
NME3-203ENST00000563367 FAM177BA6PVY3 158 aa36.71■■■■□ 3.47
NME3-203ENST00000563367 XAGE3Q8WTP9 111 aa36.71■■■■□ 3.47
NME3-203ENST00000563367 TSR2Q969E8 191 aaKnown RBP36.71■■■■□ 3.47
NME3-203ENST00000563367 H0YIN7 160 aa36.7■■■■□ 3.47
NME3-203ENST00000563367 ST5P78524 1137 aa36.7■■■■□ 3.47
NME3-203ENST00000563367 AIMP1Q12904 312 aaKnown RBP36.7■■■■□ 3.47
NME3-203ENST00000563367 GIGYF2Q6Y7W6 1299 aaKnown RBP36.7■■■■□ 3.47
NME3-203ENST00000563367 GPTP24298 496 aa36.69■■■■□ 3.46
NME3-203ENST00000563367 PDE6BP35913 854 aa36.69■■■■□ 3.46
NME3-203ENST00000563367 TPTE2Q6XPS3 522 aa36.68■■■■□ 3.46
NME3-203ENST00000563367 IL16Q14005 1332 aa36.67■■■■□ 3.46
NME3-203ENST00000563367 UBN2Q6ZU65 1347 aa36.67■■■■□ 3.46
NME3-203ENST00000563367 ZNF34Q8IZ26 560 aa36.67■■■■□ 3.46
NME3-203ENST00000563367 DBF4Q9UBU7 674 aaPredicted RBP36.67■■■■□ 3.46
NME3-203ENST00000563367 ANKRD36CQ5JPF3 1778 aa36.67■■■■□ 3.46
NME3-203ENST00000563367 TSPYL6Q8N831 410 aa36.66■■■■□ 3.46
NME3-203ENST00000563367 CACNA1SQ13698 1873 aa36.65■■■■□ 3.46
NME3-203ENST00000563367 ARHGAP27Q6ZUM4 889 aa36.65■■■■□ 3.46
NME3-203ENST00000563367 ZNF784Q8NCA9 323 aaPredicted RBP36.64■■■■□ 3.46
NME3-203ENST00000563367 PDZRN3Q9UPQ7 1066 aa36.64■■■■□ 3.46
NME3-203ENST00000563367 WDR63Q8IWG1 891 aa36.63■■■■□ 3.45
NME3-203ENST00000563367 TTLL6Q8N841 843 aa36.63■■■■□ 3.45
NME3-203ENST00000563367 SUSD4Q5VX71 490 aa36.62■■■■□ 3.45
NME3-203ENST00000563367 ZNF622Q969S3 477 aaKnown RBP eCLIP36.62■■■■□ 3.45
NME3-203ENST00000563367 HYPKQ9NX55 129 aa36.61■■■■□ 3.45
NME3-203ENST00000563367 SRGNP10124 158 aa36.6■■■■□ 3.45
NME3-203ENST00000563367 NUTM1Q86Y26 1132 aa36.6■■■■□ 3.45
NME3-203ENST00000563367 NYXQ9GZU5 481 aa36.6■■■■□ 3.45
NME3-203ENST00000563367 TNRC6CQ9HCJ0 1690 aaKnown RBP36.6■■■■□ 3.45
NME3-203ENST00000563367 SLX4Q8IY92 1834 aa36.59■■■■□ 3.45
NME3-203ENST00000563367 ABCC12Q96J65 1359 aa36.58■■■■□ 3.45
NME3-203ENST00000563367 GTF2E1P29083 439 aaPredicted RBP36.58■■■■□ 3.45
NME3-203ENST00000563367 ERFEQ4G0M1 354 aa36.58■■■■□ 3.45
NME3-203ENST00000563367 SBF1O95248 1867 aa36.58■■■■□ 3.45
NME3-203ENST00000563367 IBTKQ9P2D0 1353 aaPredicted RBP36.57■■■■□ 3.45
NME3-203ENST00000563367 KLRG2A4D1S0 409 aaPredicted RBP36.57■■■■□ 3.44
NME3-203ENST00000563367 ARFGEF2Q9Y6D5 1785 aa36.57■■■■□ 3.44
NME3-203ENST00000563367 FANCIQ9NVI1 1328 aa36.57■■■■□ 3.44
NME3-203ENST00000563367 CCER2I3L3R5 266 aa36.56■■■■□ 3.44
NME3-203ENST00000563367 STYK1Q6J9G0 422 aa36.56■■■■□ 3.44
NME3-203ENST00000563367 SPINK5Q9NQ38 1064 aaPredicted RBP36.56■■■■□ 3.44
NME3-203ENST00000563367 NTSR2O95665 410 aa36.55■■■■□ 3.44
NME3-203ENST00000563367 TCIRG1Q13488 830 aa36.55■■■■□ 3.44
NME3-203ENST00000563367 PARP10Q53GL7 1025 aa36.55■■■■□ 3.44
NME3-203ENST00000563367 ANKRD13DQ6ZTN6 518 aa36.55■■■■□ 3.44
NME3-203ENST00000563367 PLBD2Q8NHP8 589 aa36.55■■■■□ 3.44
NME3-203ENST00000563367 MASTLQ96GX5 879 aa36.55■■■■□ 3.44
NME3-203ENST00000563367 PHAXQ9H814 394 aaKnown RBP36.55■■■■□ 3.44
NME3-203ENST00000563367 ADCY9O60503 1353 aa36.54■■■■□ 3.44
NME3-203ENST00000563367 HSP90AB3PQ58FF7 597 aa36.54■■■■□ 3.44
NME3-203ENST00000563367 CCDC30Q5VVM6 783 aa36.54■■■■□ 3.44
NME3-203ENST00000563367 TWISTNBQ3B726 338 aaPredicted RBP36.52■■■■□ 3.44
NME3-203ENST00000563367 PPP1R42Q7Z4L9 355 aa36.52■■■■□ 3.44
NME3-203ENST00000563367 NLRP10Q86W26 655 aa36.51■■■■□ 3.44
NME3-203ENST00000563367 CNKSR1Q969H4 720 aa36.51■■■■□ 3.44
NME3-203ENST00000563367 CCDC88AQ3V6T2 1871 aa36.51■■■■□ 3.44
NME3-203ENST00000563367 NPR1P16066 1061 aa36.5■■■■□ 3.43
NME3-203ENST00000563367 UTP14AQ9BVJ6 771 aaKnown RBP36.5■■■■□ 3.43
NME3-203ENST00000563367 TCERG1O14776 1098 aaKnown RBP36.49■■■■□ 3.43
NME3-203ENST00000563367 ZNF219Q9P2Y4 722 aaPredicted RBP36.49■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms