RNA–Protein interactions for RNA: ENST00000561896.1

MSLN-203, Transcript of mesothelin, humanhuman

TSL 5

Gene MSLN, Length 1,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-203ENST00000561896 C1QTNF8P60827 252 aa33.33■■■□□ 2.93
MSLN-203ENST00000561896 ST5P78524 1137 aa33.33■■■□□ 2.93
MSLN-203ENST00000561896 NEUROD2Q15784 382 aa33.33■■■□□ 2.93
MSLN-203ENST00000561896 SBF1O95248 1867 aa33.31■■■□□ 2.92
MSLN-203ENST00000561896 CHL1O00533 1208 aa33.31■■■□□ 2.92
MSLN-203ENST00000561896 NPHP1O15259 732 aa33.31■■■□□ 2.92
MSLN-203ENST00000561896 NUP98P52948 1817 aa33.3■■■□□ 2.92
MSLN-203ENST00000561896 NBPF5PQ86XG9 351 aaPredicted RBP33.3■■■□□ 2.92
MSLN-203ENST00000561896 NIP7Q9Y221 180 aaKnown RBP eCLIP33.3■■■□□ 2.92
MSLN-203ENST00000561896 COL11A2P13942 1736 aaPredicted RBP33.29■■■□□ 2.92
MSLN-203ENST00000561896 MAP3K15Q6ZN16 1313 aa33.28■■■□□ 2.92
MSLN-203ENST00000561896 HLFQ16534 295 aa33.28■■■□□ 2.92
MSLN-203ENST00000561896 TPTE2Q6XPS3 522 aa33.28■■■□□ 2.92
MSLN-203ENST00000561896 ZNF316A6NFI3 1004 aaPredicted RBP33.27■■■□□ 2.92
MSLN-203ENST00000561896 KIF6Q6ZMV9 814 aa33.27■■■□□ 2.92
MSLN-203ENST00000561896 C9orf131Q5VYM1 1079 aa33.26■■■□□ 2.91
MSLN-203ENST00000561896 MYL6BP14649 208 aa33.25■■■□□ 2.91
MSLN-203ENST00000561896 CCDC24Q8N4L8 307 aa33.25■■■□□ 2.91
MSLN-203ENST00000561896 SRGNP10124 158 aa33.24■■■□□ 2.91
MSLN-203ENST00000561896 STYK1Q6J9G0 422 aa33.24■■■□□ 2.91
MSLN-203ENST00000561896 NGEFQ8N5V2 710 aa33.24■■■□□ 2.91
MSLN-203ENST00000561896 ZNF622Q969S3 477 aaKnown RBP eCLIP33.24■■■□□ 2.91
MSLN-203ENST00000561896 KLRG2A4D1S0 409 aaPredicted RBP33.23■■■□□ 2.91
MSLN-203ENST00000561896 TTLL7Q6ZT98 887 aa33.23■■■□□ 2.91
MSLN-203ENST00000561896 LRP10Q7Z4F1 713 aa33.23■■■□□ 2.91
MSLN-203ENST00000561896 ZNF526Q8TF50 670 aaPredicted RBP33.23■■■□□ 2.91
MSLN-203ENST00000561896 CNKSR1Q969H4 720 aa33.23■■■□□ 2.91
MSLN-203ENST00000561896 ARFGEF2Q9Y6D5 1785 aa33.22■■■□□ 2.91
MSLN-203ENST00000561896 PDIA6Q15084 440 aa33.22■■■□□ 2.91
MSLN-203ENST00000561896 MASTLQ96GX5 879 aa33.22■■■□□ 2.91
MSLN-203ENST00000561896 CFAP44Q96MT7 982 aa33.22■■■□□ 2.91
MSLN-203ENST00000561896 EIF2S2P20042 333 aaKnown RBP33.21■■■□□ 2.91
MSLN-203ENST00000561896 NYXQ9GZU5 481 aa33.2■■■□□ 2.91
MSLN-203ENST00000561896 ZC3H4Q9UPT8 1303 aaKnown RBP33.2■■■□□ 2.91
MSLN-203ENST00000561896 IBTKQ9P2D0 1353 aaPredicted RBP33.2■■■□□ 2.9
MSLN-203ENST00000561896 APAF1O14727 1248 aa33.19■■■□□ 2.9
MSLN-203ENST00000561896 HOXB7P09629 217 aa33.19■■■□□ 2.9
MSLN-203ENST00000561896 RNF181Q9P0P0 153 aa33.19■■■□□ 2.9
MSLN-203ENST00000561896 CALD1Q05682 793 aaKnown RBP33.18■■■□□ 2.9
MSLN-203ENST00000561896 GIGYF2Q6Y7W6 1299 aaKnown RBP33.18■■■□□ 2.9
MSLN-203ENST00000561896 SLX4Q8IY92 1834 aa33.17■■■□□ 2.9
MSLN-203ENST00000561896 FER1L6Q2WGJ9 1857 aa33.17■■■□□ 2.9
MSLN-203ENST00000561896 LMNB1P20700 586 aa33.17■■■□□ 2.9
MSLN-203ENST00000561896 LAS1LQ9Y4W2 734 aaKnown RBP33.17■■■□□ 2.9
MSLN-203ENST00000561896 ZBTB3Q9H5J0 574 aa33.16■■■□□ 2.9
MSLN-203ENST00000561896 CCDC88AQ3V6T2 1871 aa33.16■■■□□ 2.9
MSLN-203ENST00000561896 NPR1P16066 1061 aa33.15■■■□□ 2.9
MSLN-203ENST00000561896 ZNF34Q8IZ26 560 aa33.15■■■□□ 2.9
MSLN-203ENST00000561896 CACNA1SQ13698 1873 aa33.14■■■□□ 2.9
MSLN-203ENST00000561896 KIF3CO14782 793 aa33.14■■■□□ 2.9
MSLN-203ENST00000561896 ZNF853P0CG23 659 aa33.14■■■□□ 2.9
MSLN-203ENST00000561896 GTF2E1P29083 439 aaPredicted RBP33.14■■■□□ 2.9
MSLN-203ENST00000561896 RASSF7Q02833 373 aa33.14■■■□□ 2.9
MSLN-203ENST00000561896 SOGA3Q5TF21 947 aa33.14■■■□□ 2.9
MSLN-203ENST00000561896 DDX21Q9NR30 783 aaKnown RBP eCLIP33.14■■■□□ 2.9
MSLN-203ENST00000561896 RIC1Q4ADV7 1423 aa33.13■■■□□ 2.89
MSLN-203ENST00000561896 NFKBIEO00221 500 aa33.13■■■□□ 2.89
MSLN-203ENST00000561896 PROSER3Q2NL68 480 aa33.13■■■□□ 2.89
MSLN-203ENST00000561896 PRPF40BQ6NWY9 871 aaKnown RBP33.13■■■□□ 2.89
MSLN-203ENST00000561896 C21orf2O43822 256 aa33.12■■■□□ 2.89
MSLN-203ENST00000561896 IFT57Q9NWB7 429 aa33.12■■■□□ 2.89
MSLN-203ENST00000561896 UBN2Q6ZU65 1347 aa33.11■■■□□ 2.89
MSLN-203ENST00000561896 LTBP3Q9NS15 1303 aa33.11■■■□□ 2.89
MSLN-203ENST00000561896 FAM177BA6PVY3 158 aa33.11■■■□□ 2.89
MSLN-203ENST00000561896 ANP32CO43423 234 aa33.11■■■□□ 2.89
MSLN-203ENST00000561896 KRT24Q2M2I5 525 aa33.11■■■□□ 2.89
MSLN-203ENST00000561896 PARP10Q53GL7 1025 aa33.11■■■□□ 2.89
MSLN-203ENST00000561896 KDM2BQ8NHM5 1336 aa33.1■■■□□ 2.89
MSLN-203ENST00000561896 GNAI1P63096 354 aa33.1■■■□□ 2.89
MSLN-203ENST00000561896 CCDC184Q52MB2 194 aa33.1■■■□□ 2.89
MSLN-203ENST00000561896 MBIPQ9NS73 344 aa33.1■■■□□ 2.89
MSLN-203ENST00000561896 DICER1Q9UPY3 1922 aaKnown RBP33.1■■■□□ 2.89
MSLN-203ENST00000561896 CRY2Q49AN0 593 aa33.09■■■□□ 2.89
MSLN-203ENST00000561896 ANXA1P04083 346 aa33.08■■■□□ 2.89
MSLN-203ENST00000561896 GPTP24298 496 aa33.08■■■□□ 2.89
MSLN-203ENST00000561896 PRELPP51888 382 aa33.08■■■□□ 2.89
MSLN-203ENST00000561896 HDGFL1Q5TGJ6 251 aa33.08■■■□□ 2.89
MSLN-203ENST00000561896 COPS6Q7L5N1 327 aa33.08■■■□□ 2.89
MSLN-203ENST00000561896 C7orf43Q8WVR3 580 aa33.08■■■□□ 2.89
MSLN-203ENST00000561896 ANKRD36CQ5JPF3 1778 aa33.08■■■□□ 2.89
MSLN-203ENST00000561896 ALDH1B1P30837 517 aa33.07■■■□□ 2.88
MSLN-203ENST00000561896 HSP90AB3PQ58FF7 597 aa33.07■■■□□ 2.88
MSLN-203ENST00000561896 SUSD4Q5VX71 490 aa33.07■■■□□ 2.88
MSLN-203ENST00000561896 PPP1R42Q7Z4L9 355 aa33.07■■■□□ 2.88
MSLN-203ENST00000561896 NECTIN2Q92692 538 aa33.07■■■□□ 2.88
MSLN-203ENST00000561896 ABCC12Q96J65 1359 aa33.07■■■□□ 2.88
MSLN-203ENST00000561896 SENP3-EIF4A1A0A087X0R7 540 aa33.06■■■□□ 2.88
MSLN-203ENST00000561896 NUTM1Q86Y26 1132 aa33.06■■■□□ 2.88
MSLN-203ENST00000561896 XAGE3Q8WTP9 111 aa33.06■■■□□ 2.88
MSLN-203ENST00000561896 DBF4Q9UBU7 674 aaPredicted RBP33.06■■■□□ 2.88
MSLN-203ENST00000561896 TNRC6CQ9HCJ0 1690 aaKnown RBP33.06■■■□□ 2.88
MSLN-203ENST00000561896 NTSR2O95665 410 aa33.05■■■□□ 2.88
MSLN-203ENST00000561896 ERFEQ4G0M1 354 aa33.05■■■□□ 2.88
MSLN-203ENST00000561896 DUSP27Q5VZP5 1158 aa33.05■■■□□ 2.88
MSLN-203ENST00000561896 TAOK3Q9H2K8 898 aa33.05■■■□□ 2.88
MSLN-203ENST00000561896 TIAM2Q8IVF5 1701 aa33.05■■■□□ 2.88
MSLN-203ENST00000561896 RNF123Q5XPI4 1314 aa33.04■■■□□ 2.88
MSLN-203ENST00000561896 CCDC27Q2M243 656 aa33.04■■■□□ 2.88
MSLN-203ENST00000561896 NCBP3Q53F19 620 aaKnown RBP33.04■■■□□ 2.88
MSLN-203ENST00000561896 NMRK2Q9NPI5 230 aa33.04■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms