RNA–Protein interactions for RNA: ENST00000561458.5

AC055874.1-201, humanhuman

TSL 2 BASIC

Gene AC055874.1, Length 479 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055874.1-201ENST00000561458 TMEM214Q6NUQ4 689 aaKnown RBP7.49□□□□□ -1.21
AC055874.1-201ENST00000561458 PROSER2Q86WR7 435 aaPredicted RBP7.49□□□□□ -1.21
AC055874.1-201ENST00000561458 RUBCNLQ9H714 662 aa7.49□□□□□ -1.21
AC055874.1-201ENST00000561458 NDUFB9Q9Y6M9 179 aa7.49□□□□□ -1.21
AC055874.1-201ENST00000561458 SMG6Q86US8 1419 aaKnown RBP7.49□□□□□ -1.21
AC055874.1-201ENST00000561458 MIA2Q96PC5 1412 aa7.49□□□□□ -1.21
AC055874.1-201ENST00000561458 UBAP2LQ14157 1087 aaKnown RBP7.48□□□□□ -1.21
AC055874.1-201ENST00000561458 GDPD2Q9HCC8 539 aa7.48□□□□□ -1.21
AC055874.1-201ENST00000561458 GGA1Q9UJY5 639 aa7.48□□□□□ -1.21
AC055874.1-201ENST00000561458 TBC1D2BQ9UPU7 963 aa7.48□□□□□ -1.21
AC055874.1-201ENST00000561458 PTPRKQ15262 1439 aa7.47□□□□□ -1.21
AC055874.1-201ENST00000561458 SPATA31E1Q6ZUB1 1445 aa7.47□□□□□ -1.21
AC055874.1-201ENST00000561458 FGFR3P22607 806 aa7.47□□□□□ -1.21
AC055874.1-201ENST00000561458 MSX1P28360 303 aa7.47□□□□□ -1.21
AC055874.1-201ENST00000561458 ABL2P42684 1182 aa7.47□□□□□ -1.21
AC055874.1-201ENST00000561458 C4orf17Q53FE4 359 aa7.47□□□□□ -1.21
AC055874.1-201ENST00000561458 ESCO1Q5FWF5 840 aa7.47□□□□□ -1.21
AC055874.1-201ENST00000561458 LINC00114Q6XXX2 140 aa7.47□□□□□ -1.21
AC055874.1-201ENST00000561458 ABHD17AQ96GS6 310 aa7.47□□□□□ -1.21
AC055874.1-201ENST00000561458 SUV39H2Q9H5I1 410 aa7.47□□□□□ -1.21
AC055874.1-201ENST00000561458 NOP53Q9NZM5 478 aaKnown RBP7.47□□□□□ -1.21
AC055874.1-201ENST00000561458 MBD5Q9P267 1494 aa7.47□□□□□ -1.21
AC055874.1-201ENST00000561458 WWC1Q8IX03 1113 aa7.46□□□□□ -1.22
AC055874.1-201ENST00000561458 XAGE2Q96GT9 111 aa7.46□□□□□ -1.22
AC055874.1-201ENST00000561458 FHDC1Q9C0D6 1143 aaPredicted RBP7.46□□□□□ -1.22
AC055874.1-201ENST00000561458 HRH3Q9Y5N1 445 aa7.46□□□□□ -1.22
AC055874.1-201ENST00000561458 RPRD2Q5VT52 1461 aaKnown RBP7.46□□□□□ -1.22
AC055874.1-201ENST00000561458 CADPSQ9ULU8 1353 aa7.46□□□□□ -1.22
AC055874.1-201ENST00000561458 C1QTNF9BB2RNN3 333 aa7.45□□□□□ -1.22
AC055874.1-201ENST00000561458 C2CD2LO14523 706 aa7.45□□□□□ -1.22
AC055874.1-201ENST00000561458 HOXB4P17483 251 aaPredicted RBP7.45□□□□□ -1.22
AC055874.1-201ENST00000561458 KRTAP4-8Q9BYQ9 185 aa7.45□□□□□ -1.22
AC055874.1-201ENST00000561458 INSRP06213 1382 aa7.45□□□□□ -1.22
AC055874.1-201ENST00000561458 ROCK1Q13464 1354 aa7.45□□□□□ -1.22
AC055874.1-201ENST00000561458 KIF14Q15058 1648 aa7.45□□□□□ -1.22
AC055874.1-201ENST00000561458 ARAFP10398 606 aa7.44□□□□□ -1.22
AC055874.1-201ENST00000561458 EPXP11678 715 aa7.44□□□□□ -1.22
AC055874.1-201ENST00000561458 FIGNL1Q6PIW4 674 aa7.44□□□□□ -1.22
AC055874.1-201ENST00000561458 CD163Q86VB7 1156 aa7.44□□□□□ -1.22
AC055874.1-201ENST00000561458 RHBDD1Q8TEB9 315 aa7.44□□□□□ -1.22
AC055874.1-201ENST00000561458 BTBD6Q96KE9 485 aa7.44□□□□□ -1.22
AC055874.1-201ENST00000561458 SIN3AQ96ST3 1273 aa7.44□□□□□ -1.22
AC055874.1-201ENST00000561458 NDFIP2Q9NV92 336 aa7.44□□□□□ -1.22
AC055874.1-201ENST00000561458 WASHC2AQ641Q2 1341 aa7.44□□□□□ -1.22
AC055874.1-201ENST00000561458 E9PCH4 1651 aa7.44□□□□□ -1.22
AC055874.1-201ENST00000561458 CCDC7Q96M83 1385 aa7.44□□□□□ -1.22
AC055874.1-201ENST00000561458 FHOD3Q2V2M9 1422 aa7.44□□□□□ -1.22
AC055874.1-201ENST00000561458 DNMT1P26358 1616 aaKnown RBP7.43□□□□□ -1.22
AC055874.1-201ENST00000561458 BNIP3LO60238 219 aa7.43□□□□□ -1.22
AC055874.1-201ENST00000561458 DGKGP49619 791 aa7.43□□□□□ -1.22
AC055874.1-201ENST00000561458 CTBSQ01459 385 aa7.43□□□□□ -1.22
AC055874.1-201ENST00000561458 RNF135Q8IUD6 432 aa7.43□□□□□ -1.22
AC055874.1-201ENST00000561458 CRISPLD1Q9H336 500 aa7.43□□□□□ -1.22
AC055874.1-201ENST00000561458 NOP58Q9Y2X3 529 aaKnown RBP7.43□□□□□ -1.22
AC055874.1-201ENST00000561458 ARID4BQ4LE39 1312 aaPredicted RBP7.43□□□□□ -1.22
AC055874.1-201ENST00000561458 DEKP35659 375 aaKnown RBP7.42□□□□□ -1.22
AC055874.1-201ENST00000561458 TBC1D9Q6ZT07 1266 aa7.42□□□□□ -1.22
AC055874.1-201ENST00000561458 FNBP4Q8N3X1 1017 aaPredicted RBP7.42□□□□□ -1.22
AC055874.1-201ENST00000561458 CCDC85AQ96PX6 553 aaPredicted RBP7.42□□□□□ -1.22
AC055874.1-201ENST00000561458 CDCA7Q9BWT1 371 aaPredicted RBP7.42□□□□□ -1.22
AC055874.1-201ENST00000561458 KTN1Q86UP2 1357 aaKnown RBP7.42□□□□□ -1.22
AC055874.1-201ENST00000561458 ARHGEF12Q9NZN5 1544 aa7.42□□□□□ -1.22
AC055874.1-201ENST00000561458 ADGBQ8N7X0 1667 aa7.41□□□□□ -1.22
AC055874.1-201ENST00000561458 ARID3CA6NKF2 412 aa7.41□□□□□ -1.22
AC055874.1-201ENST00000561458 NEURL1BA8MQ27 555 aa7.41□□□□□ -1.22
AC055874.1-201ENST00000561458 CHRNA4P43681 627 aa7.41□□□□□ -1.22
AC055874.1-201ENST00000561458 HNRNPUQ00839 825 aaKnown RBP eCLIP7.41□□□□□ -1.22
AC055874.1-201ENST00000561458 TLR1Q15399 786 aa7.41□□□□□ -1.22
AC055874.1-201ENST00000561458 CEP126Q9P2H0 1117 aa7.41□□□□□ -1.22
AC055874.1-201ENST00000561458 USP35Q9P2H5 1018 aa7.41□□□□□ -1.22
AC055874.1-201ENST00000561458 POLA1P09884 1462 aaPredicted RBP7.41□□□□□ -1.22
AC055874.1-201ENST00000561458 GAPVD1Q14C86 1478 aa7.41□□□□□ -1.22
AC055874.1-201ENST00000561458 TOPBP1Q92547 1522 aa7.41□□□□□ -1.22
AC055874.1-201ENST00000561458 PLA2G4AP47712 749 aa7.4□□□□□ -1.22
AC055874.1-201ENST00000561458 PSMG3-AS1Q96PY0 264 aa7.4□□□□□ -1.22
AC055874.1-201ENST00000561458 PRKRIP1Q9H875 184 aaPredicted RBP7.4□□□□□ -1.22
AC055874.1-201ENST00000561458 PCDHGC4Q9Y5F7 938 aa7.4□□□□□ -1.22
AC055874.1-201ENST00000561458 NESP48681 1621 aa7.4□□□□□ -1.22
AC055874.1-201ENST00000561458 CROCC2H7BZ55 1655 aa7.39□□□□□ -1.23
AC055874.1-201ENST00000561458 KDM5CP41229 1560 aa7.39□□□□□ -1.23
AC055874.1-201ENST00000561458 WDR62O43379 1518 aa7.39□□□□□ -1.23
AC055874.1-201ENST00000561458 MAGI3Q5TCQ9 1506 aa7.39□□□□□ -1.23
AC055874.1-201ENST00000561458 ROCK2O75116 1388 aaKnown RBP7.39□□□□□ -1.23
AC055874.1-201ENST00000561458 MTUS2Q5JR59 1369 aa7.39□□□□□ -1.23
AC055874.1-201ENST00000561458 DHX29Q7Z478 1369 aaKnown RBP7.39□□□□□ -1.23
AC055874.1-201ENST00000561458 GPR37L1O60883 481 aa7.39□□□□□ -1.23
AC055874.1-201ENST00000561458 ADH6P28332 368 aa7.39□□□□□ -1.23
AC055874.1-201ENST00000561458 ITGAEP38570 1179 aa7.39□□□□□ -1.23
AC055874.1-201ENST00000561458 IRF5Q13568 498 aa7.39□□□□□ -1.23
AC055874.1-201ENST00000561458 CHSY3Q70JA7 882 aa7.39□□□□□ -1.23
AC055874.1-201ENST00000561458 C1orf216Q8TAB5 229 aa7.39□□□□□ -1.23
AC055874.1-201ENST00000561458 ETNK1Q9HBU6 452 aa7.39□□□□□ -1.23
AC055874.1-201ENST00000561458 ZNF777Q9ULD5 760 aaPredicted RBP7.39□□□□□ -1.23
AC055874.1-201ENST00000561458 DOLKQ9UPQ8 538 aa7.39□□□□□ -1.23
AC055874.1-201ENST00000561458 FANCD2Q9BXW9 1451 aa7.38□□□□□ -1.23
AC055874.1-201ENST00000561458 ANKRD30BQ9BXX2 1392 aa7.38□□□□□ -1.23
AC055874.1-201ENST00000561458 EIF4G2P78344 907 aaKnown RBP eCLIP7.38□□□□□ -1.23
AC055874.1-201ENST00000561458 USP4Q13107 963 aa7.38□□□□□ -1.23
AC055874.1-201ENST00000561458 FAM50AQ14320 339 aaKnown RBP7.38□□□□□ -1.23
AC055874.1-201ENST00000561458 WASHC4Q2M389 1173 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms