RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 KRT18P05783 430 aaKnown RBP2.67□□□□□ -1.98
RTF1-207ENST00000561076 PDGFRBP09619 1106 aa2.67□□□□□ -1.98
RTF1-207ENST00000561076 FGRP09769 529 aa2.67□□□□□ -1.98
RTF1-207ENST00000561076 LMNB1P20700 586 aa2.67□□□□□ -1.98
RTF1-207ENST00000561076 MZF1P28698 734 aaPredicted RBP2.67□□□□□ -1.98
RTF1-207ENST00000561076 NASPP49321 788 aaPredicted RBP2.67□□□□□ -1.98
RTF1-207ENST00000561076 ECM1Q16610 540 aa2.67□□□□□ -1.98
RTF1-207ENST00000561076 LDLRAD1Q5T700 205 aa2.67□□□□□ -1.98
RTF1-207ENST00000561076 WDR78Q5VTH9 848 aa2.67□□□□□ -1.98
RTF1-207ENST00000561076 SAMD7Q7Z3H4 446 aa2.67□□□□□ -1.98
RTF1-207ENST00000561076 KIAA0825Q8IV33 1275 aa2.67□□□□□ -1.98
RTF1-207ENST00000561076 TEX2Q8IWB9 1127 aa2.67□□□□□ -1.98
RTF1-207ENST00000561076 PAF1Q8N7H5 531 aa2.67□□□□□ -1.98
RTF1-207ENST00000561076 PMM1Q92871 262 aa2.67□□□□□ -1.98
RTF1-207ENST00000561076 KHSRPQ92945 711 aaKnown RBP eCLIP2.67□□□□□ -1.98
RTF1-207ENST00000561076 ANAPC16Q96DE5 110 aa2.67□□□□□ -1.98
RTF1-207ENST00000561076 STAC3Q96MF2 364 aa2.67□□□□□ -1.98
RTF1-207ENST00000561076 CRBNQ96SW2 442 aa2.67□□□□□ -1.98
RTF1-207ENST00000561076 FAM129BQ96TA1 746 aa2.67□□□□□ -1.98
RTF1-207ENST00000561076 NBPF3Q9H094 633 aa2.67□□□□□ -1.98
RTF1-207ENST00000561076 RNF19AQ9NV58 838 aa2.67□□□□□ -1.98
RTF1-207ENST00000561076 TYW1Q9NV66 732 aaKnown RBP2.67□□□□□ -1.98
RTF1-207ENST00000561076 EVA1BQ9NVM1 165 aa2.67□□□□□ -1.98
RTF1-207ENST00000561076 ZNF358Q9NW07 568 aa2.67□□□□□ -1.98
RTF1-207ENST00000561076 SERTAD1Q9UHV2 236 aa2.67□□□□□ -1.98
RTF1-207ENST00000561076 RABGEF1Q9UJ41 708 aa2.67□□□□□ -1.98
RTF1-207ENST00000561076 POLIQ9UNA4 740 aa2.67□□□□□ -1.98
RTF1-207ENST00000561076 PCDHGA11Q9Y5H2 935 aa2.67□□□□□ -1.98
RTF1-207ENST00000561076 GOLGA8CPA6NN73 597 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 EIF1AYO14602 144 aaKnown RBP2.66□□□□□ -1.98
RTF1-207ENST00000561076 KIF3BO15066 747 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 FZD6O60353 706 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 CAND2O75155 1236 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 GADD45BO75293 160 aaPredicted RBP2.66□□□□□ -1.98
RTF1-207ENST00000561076 DKK1O94907 266 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 GTF2E1P29083 439 aaPredicted RBP2.66□□□□□ -1.98
RTF1-207ENST00000561076 GJA8P48165 433 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 GDF10P55107 478 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 TBX4P57082 545 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 RHBDL3P58872 404 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 RACK1P63244 317 aaKnown RBP2.66□□□□□ -1.98
RTF1-207ENST00000561076 IRX6P78412 446 aaPredicted RBP2.66□□□□□ -1.98
RTF1-207ENST00000561076 PTPN12Q05209 780 aaKnown RBP2.66□□□□□ -1.98
RTF1-207ENST00000561076 FAM50AQ14320 339 aaKnown RBP2.66□□□□□ -1.98
RTF1-207ENST00000561076 PLEKHG4Q58EX7 1191 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 TNNI3KQ59H18 835 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 ESCO1Q5FWF5 840 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 WWC2Q6AWC2 1192 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 RNF19BQ6ZMZ0 732 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 TSHZ1Q6ZSZ6 1077 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 SEPT12Q8IYM1 358 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 TNS4Q8IZW8 715 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 SH3TC2Q8TF17 1288 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 EDEM1Q92611 657 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 LRCH3Q96II8 777 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 PURBQ96QR8 312 aaKnown RBP2.66□□□□□ -1.98
RTF1-207ENST00000561076 RPS6KC1Q96S38 1066 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 SETDB2Q96T68 719 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 PLCD4Q9BRC7 762 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 DNAJC25Q9H1X3 360 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 C12orf49Q9H741 205 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 SNTG2Q9NY99 539 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 TERF2IPQ9NYB0 399 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 FAM8A1Q9UBU6 413 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 PRR12Q9ULL5 1215 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 TTF2Q9UNY4 1162 aaKnown RBP2.66□□□□□ -1.98
RTF1-207ENST00000561076 ZNF232Q9UNY5 417 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 COLQQ9Y215 455 aaPredicted RBP2.66□□□□□ -1.98
RTF1-207ENST00000561076 SALL2Q9Y467 1007 aaPredicted RBP2.66□□□□□ -1.98
RTF1-207ENST00000561076 LAS1LQ9Y4W2 734 aaKnown RBP2.66□□□□□ -1.98
RTF1-207ENST00000561076 PCDHB3Q9Y5E6 796 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 MRVI1Q9Y6F6 885 aa2.66□□□□□ -1.98
RTF1-207ENST00000561076 V9GY48 417 aaPredicted RBP2.66□□□□□ -1.98
RTF1-207ENST00000561076 KDM4FA0A1W2PPD8 638 aa2.65□□□□□ -1.99
RTF1-207ENST00000561076 ESPNB1AK53 854 aa2.65□□□□□ -1.99
RTF1-207ENST00000561076 HAX1O00165 279 aa2.65□□□□□ -1.99
RTF1-207ENST00000561076 HCLS1P14317 486 aaPredicted RBP2.65□□□□□ -1.99
RTF1-207ENST00000561076 CPEP16870 476 aa2.65□□□□□ -1.99
RTF1-207ENST00000561076 GBP2P32456 591 aaPredicted RBP2.65□□□□□ -1.99
RTF1-207ENST00000561076 ZAP70P43403 619 aa2.65□□□□□ -1.99
RTF1-207ENST00000561076 ST13P50502 369 aaKnown RBP2.65□□□□□ -1.99
RTF1-207ENST00000561076 GYS2P54840 703 aa2.65□□□□□ -1.99
RTF1-207ENST00000561076 PPP4CP60510 307 aa2.65□□□□□ -1.99
RTF1-207ENST00000561076 PSMA6P60900 246 aaKnown RBP2.65□□□□□ -1.99
RTF1-207ENST00000561076 COL9A2Q14055 689 aaPredicted RBP2.65□□□□□ -1.99
RTF1-207ENST00000561076 LONRF3Q496Y0 759 aa2.65□□□□□ -1.99
RTF1-207ENST00000561076 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.65□□□□□ -1.99
RTF1-207ENST00000561076 ZFYVE27Q5T4F4 411 aa2.65□□□□□ -1.99
RTF1-207ENST00000561076 FBXW10Q5XX13 1052 aa2.65□□□□□ -1.99
RTF1-207ENST00000561076 CCSAPQ6IQ19 270 aaPredicted RBP2.65□□□□□ -1.99
RTF1-207ENST00000561076 BRICD5Q6PL45 260 aa2.65□□□□□ -1.99
RTF1-207ENST00000561076 BLOC1S3Q6QNY0 202 aa2.65□□□□□ -1.99
RTF1-207ENST00000561076 LRP10Q7Z4F1 713 aa2.65□□□□□ -1.99
RTF1-207ENST00000561076 NBPF15Q8N660 670 aa2.65□□□□□ -1.99
RTF1-207ENST00000561076 PNISRQ8TF01 805 aaKnown RBP2.65□□□□□ -1.99
RTF1-207ENST00000561076 SGSM3Q96HU1 749 aa2.65□□□□□ -1.99
RTF1-207ENST00000561076 RNPC3Q96LT9 517 aaKnown RBP2.65□□□□□ -1.99
RTF1-207ENST00000561076 SRCIN1Q9C0H9 1055 aa2.65□□□□□ -1.99
RTF1-207ENST00000561076 SAP130Q9H0E3 1048 aa2.65□□□□□ -1.99
RTF1-207ENST00000561076 UNC93B1Q9H1C4 597 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms