RNA–Protein interactions for RNA: ENST00000560779.5

RMDN3-210, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 3

Gene RMDN3, Length 572 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-210ENST00000560779 N4BP2Q86UW6 1770 aaPredicted RBP17.42■□□□□ 0.38
RMDN3-210ENST00000560779 FANCIQ9NVI1 1328 aa17.42■□□□□ 0.38
RMDN3-210ENST00000560779 CARMIL3Q8ND23 1372 aa17.41■□□□□ 0.38
RMDN3-210ENST00000560779 DLEC1Q9Y238 1755 aa17.41■□□□□ 0.38
RMDN3-210ENST00000560779 KIF6Q6ZMV9 814 aa17.41■□□□□ 0.38
RMDN3-210ENST00000560779 KLHL34Q8N239 644 aa17.41■□□□□ 0.38
RMDN3-210ENST00000560779 C8orf58Q8NAV2 365 aa17.41■□□□□ 0.38
RMDN3-210ENST00000560779 MAP3K15Q6ZN16 1313 aa17.41■□□□□ 0.38
RMDN3-210ENST00000560779 ANKRD31Q8N7Z5 1873 aa17.4■□□□□ 0.38
RMDN3-210ENST00000560779 TBC1D9BQ66K14 1250 aa17.4■□□□□ 0.38
RMDN3-210ENST00000560779 ARFGEF2Q9Y6D5 1785 aa17.4■□□□□ 0.38
RMDN3-210ENST00000560779 ATP10DQ9P241 1426 aa17.39■□□□□ 0.38
RMDN3-210ENST00000560779 GOLGA2Q08379 1002 aa17.39■□□□□ 0.37
RMDN3-210ENST00000560779 PROSER3Q2NL68 480 aa17.39■□□□□ 0.37
RMDN3-210ENST00000560779 NECTIN2Q92692 538 aa17.39■□□□□ 0.37
RMDN3-210ENST00000560779 HYPKQ9NX55 129 aa17.39■□□□□ 0.37
RMDN3-210ENST00000560779 CHPF2Q9P2E5 772 aa17.39■□□□□ 0.37
RMDN3-210ENST00000560779 SERPINB2P05120 415 aa17.38■□□□□ 0.37
RMDN3-210ENST00000560779 CCDC30Q5VVM6 783 aa17.38■□□□□ 0.37
RMDN3-210ENST00000560779 TTLL7Q6ZT98 887 aa17.38■□□□□ 0.37
RMDN3-210ENST00000560779 SETDB2Q96T68 719 aa17.38■□□□□ 0.37
RMDN3-210ENST00000560779 CHD4Q14839 1912 aa17.37■□□□□ 0.37
RMDN3-210ENST00000560779 ELL2O00472 640 aaPredicted RBP17.37■□□□□ 0.37
RMDN3-210ENST00000560779 ANXA1P04083 346 aa17.37■□□□□ 0.37
RMDN3-210ENST00000560779 TGFB2P61812 414 aa17.37■□□□□ 0.37
RMDN3-210ENST00000560779 TWISTNBQ3B726 338 aaPredicted RBP17.37■□□□□ 0.37
RMDN3-210ENST00000560779 GIGYF2Q6Y7W6 1299 aaKnown RBP17.37■□□□□ 0.37
RMDN3-210ENST00000560779 TSPYL6Q8N831 410 aa17.37■□□□□ 0.37
RMDN3-210ENST00000560779 NLGN2Q8NFZ4 835 aa17.37■□□□□ 0.37
RMDN3-210ENST00000560779 SPINK5Q9NQ38 1064 aaPredicted RBP17.37■□□□□ 0.37
RMDN3-210ENST00000560779 ARFGEF1Q9Y6D6 1849 aa17.37■□□□□ 0.37
RMDN3-210ENST00000560779 PXDNLA1KZ92 1463 aa17.37■□□□□ 0.37
RMDN3-210ENST00000560779 DCAF8L1A6NGE4 600 aa17.36■□□□□ 0.37
RMDN3-210ENST00000560779 HLFQ16534 295 aa17.36■□□□□ 0.37
RMDN3-210ENST00000560779 BICDL1Q6ZP65 573 aa17.36■□□□□ 0.37
RMDN3-210ENST00000560779 XAGE3Q8WTP9 111 aa17.36■□□□□ 0.37
RMDN3-210ENST00000560779 E9PSI1 815 aa17.35■□□□□ 0.37
RMDN3-210ENST00000560779 COPS6Q7L5N1 327 aa17.35■□□□□ 0.37
RMDN3-210ENST00000560779 ZBTB3Q9H5J0 574 aa17.35■□□□□ 0.37
RMDN3-210ENST00000560779 NIP7Q9Y221 180 aaKnown RBP eCLIP17.35■□□□□ 0.37
RMDN3-210ENST00000560779 IBTKQ9P2D0 1353 aaPredicted RBP17.35■□□□□ 0.37
RMDN3-210ENST00000560779 EXOSC9Q06265 439 aaKnown RBP17.33■□□□□ 0.36
RMDN3-210ENST00000560779 HSP90AB3PQ58FF7 597 aa17.33■□□□□ 0.36
RMDN3-210ENST00000560779 PRR5LQ6MZQ0 368 aa17.33■□□□□ 0.36
RMDN3-210ENST00000560779 CNBD1Q8NA66 436 aa17.33■□□□□ 0.36
RMDN3-210ENST00000560779 STK31Q9BXU1 1019 aa17.33■□□□□ 0.36
RMDN3-210ENST00000560779 COL11A2P13942 1736 aaPredicted RBP17.33■□□□□ 0.36
RMDN3-210ENST00000560779 VAMP4O75379 141 aa17.32■□□□□ 0.36
RMDN3-210ENST00000560779 SLFN5Q08AF3 891 aa17.32■□□□□ 0.36
RMDN3-210ENST00000560779 AIMP1Q12904 312 aaKnown RBP17.32■□□□□ 0.36
RMDN3-210ENST00000560779 PARP10Q53GL7 1025 aa17.32■□□□□ 0.36
RMDN3-210ENST00000560779 ZNF34Q8IZ26 560 aa17.32■□□□□ 0.36
RMDN3-210ENST00000560779 PLBD2Q8NHP8 589 aa17.32■□□□□ 0.36
RMDN3-210ENST00000560779 PDZRN3Q9UPQ7 1066 aa17.32■□□□□ 0.36
RMDN3-210ENST00000560779 RIC1Q4ADV7 1423 aa17.31■□□□□ 0.36
RMDN3-210ENST00000560779 ST5P78524 1137 aa17.31■□□□□ 0.36
RMDN3-210ENST00000560779 TPTE2Q6XPS3 522 aa17.31■□□□□ 0.36
RMDN3-210ENST00000560779 ANKRD13DQ6ZTN6 518 aa17.31■□□□□ 0.36
RMDN3-210ENST00000560779 NBPF5PQ86XG9 351 aaPredicted RBP17.31■□□□□ 0.36
RMDN3-210ENST00000560779 NYXQ9GZU5 481 aa17.31■□□□□ 0.36
RMDN3-210ENST00000560779 RNF123Q5XPI4 1314 aa17.3■□□□□ 0.36
RMDN3-210ENST00000560779 BRIP1Q9BX63 1249 aa17.3■□□□□ 0.36
RMDN3-210ENST00000560779 CACNA1SQ13698 1873 aa17.3■□□□□ 0.36
RMDN3-210ENST00000560779 UBN2Q6ZU65 1347 aa17.29■□□□□ 0.36
RMDN3-210ENST00000560779 NPHP1O15259 732 aa17.29■□□□□ 0.36
RMDN3-210ENST00000560779 DDX58O95786 925 aaKnown RBP17.29■□□□□ 0.36
RMDN3-210ENST00000560779 TCIRG1Q13488 830 aa17.29■□□□□ 0.36
RMDN3-210ENST00000560779 TRMT2AQ8IZ69 625 aaKnown RBP17.29■□□□□ 0.36
RMDN3-210ENST00000560779 PHAXQ9H814 394 aaKnown RBP17.29■□□□□ 0.36
RMDN3-210ENST00000560779 LAMB2P55268 1798 aa17.28■□□□□ 0.36
RMDN3-210ENST00000560779 DPEP1P16444 411 aa17.28■□□□□ 0.36
RMDN3-210ENST00000560779 PDE6BP35913 854 aa17.28■□□□□ 0.36
RMDN3-210ENST00000560779 GPR162Q16538 588 aa17.28■□□□□ 0.36
RMDN3-210ENST00000560779 TNRC6CQ9HCJ0 1690 aaKnown RBP17.28■□□□□ 0.36
RMDN3-210ENST00000560779 A0A0G2JLW4 131 aa17.27■□□□□ 0.36
RMDN3-210ENST00000560779 KCNA3P22001 575 aa17.27■□□□□ 0.36
RMDN3-210ENST00000560779 GPTP24298 496 aa17.27■□□□□ 0.36
RMDN3-210ENST00000560779 PPP1R42Q7Z4L9 355 aa17.27■□□□□ 0.36
RMDN3-210ENST00000560779 ZNF428Q96B54 188 aa17.27■□□□□ 0.36
RMDN3-210ENST00000560779 GRIN3BO60391 1043 aa17.26■□□□□ 0.35
RMDN3-210ENST00000560779 SLC4A2P04920 1241 aa17.26■□□□□ 0.35
RMDN3-210ENST00000560779 HNRNPUQ00839 825 aaKnown RBP eCLIP17.26■□□□□ 0.35
RMDN3-210ENST00000560779 RIC3Q7Z5B4 369 aa17.26■□□□□ 0.35
RMDN3-210ENST00000560779 CDCA7LQ96GN5 454 aa17.26■□□□□ 0.35
RMDN3-210ENST00000560779 PIM2Q9P1W9 311 aa17.26■□□□□ 0.35
RMDN3-210ENST00000560779 DDX60Q8IY21 1712 aaKnown RBP17.25■□□□□ 0.35
RMDN3-210ENST00000560779 KLRG2A4D1S0 409 aaPredicted RBP17.25■□□□□ 0.35
RMDN3-210ENST00000560779 H0YIN7 160 aa17.25■□□□□ 0.35
RMDN3-210ENST00000560779 NTSR2O95665 410 aa17.25■□□□□ 0.35
RMDN3-210ENST00000560779 CT47B1P0C2W7 299 aaPredicted RBP17.25■□□□□ 0.35
RMDN3-210ENST00000560779 YBX3P16989 372 aaKnown RBP eCLIP17.25■□□□□ 0.356e-6■□□□□ 10.6
RMDN3-210ENST00000560779 GTF2E1P29083 439 aaPredicted RBP17.25■□□□□ 0.35
RMDN3-210ENST00000560779 TRIM28Q13263 835 aaKnown RBP17.25■□□□□ 0.35
RMDN3-210ENST00000560779 SUSD4Q5VX71 490 aa17.25■□□□□ 0.35
RMDN3-210ENST00000560779 NLRP10Q86W26 655 aa17.25■□□□□ 0.35
RMDN3-210ENST00000560779 ISCA1Q9BUE6 129 aa17.25■□□□□ 0.35
RMDN3-210ENST00000560779 CHRNA5P30532 468 aa17.24■□□□□ 0.35
RMDN3-210ENST00000560779 FLIIQ13045 1269 aa17.24■□□□□ 0.35
RMDN3-210ENST00000560779 KSR2Q6VAB6 950 aa17.24■□□□□ 0.35
RMDN3-210ENST00000560779 C2CD5Q86YS7 1000 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms